Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog PdhR - Vibrionales

Properties
Regulator type: Transcription factor
Regulator family: GntR/Others
Regulation mode: repressor
Biological process: Pyruvate metabolism
Effector: Pyruvate
Phylum: Proteobacteria/gamma
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 18 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Vibrio cholerae O1 biovar eltor str. N16961 4 1
Vibrio vulnificus CMCP6 4 1
Vibrio harveyi ATCC BAA-1116 4 1
Vibrio parahaemolyticus RIMD 2210633 4 1
Vibrio shilonii AK1 4 1
Vibrio splendidus LGP32 4 1
Vibrio fischeri ES114 4 1
Vibrio salmonicida LFI1238 2 1
Vibrio angustum S14 4 1
Photobacterium profundum SS9 4 1
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
pdhR
*
Vibrio cholerae O1 biovar eltor str. N16961

Site:
position = -191
score = 6.2701
sequence = ATTGGTCTGACCAAT

Site:
position = -53
score = 6.06851
sequence = ATTGGTATTACCAAT

Gene: VC2415: Transcriptional repressor for pyruvate dehydrogenase complex
*
Vibrio vulnificus CMCP6

Site:
position = -182
score = 6.16931
sequence = ATTGGTAAGACCAAT

Site:
position = -44
score = 6.06851
sequence = ATTGGTATTACCAAT

Gene: VV1_1629: Transcriptional repressor for pyruvate dehydrogenase complex
*
Vibrio harveyi ATCC BAA-1116

Site:
position = -182
score = 6.16931
sequence = ATTGGTCATACCAAT

Site:
position = -44
score = 6.06851
sequence = ATTGGTATTACCAAT

Gene: VIBHAR_03465: Transcriptional repressor for pyruvate dehydrogenase complex
*
Vibrio parahaemolyticus RIMD 2210633

Site:
position = -182
score = 6.2701
sequence = ATTGGTCAGACCAAT

Site:
position = -44
score = 6.06851
sequence = ATTGGTATTACCAAT

Gene: VP2520: Transcriptional repressor for pyruvate dehydrogenase complex
*
Vibrio shilonii AK1

Site:
position = -183
score = 5.05888
sequence = ATTGGTCTGACCATG

Site:
position = -45
score = 6.06851
sequence = ATTGGTAATACCAAT

Gene: VSAK1_04705: Transcriptional repressor for pyruvate dehydrogenase complex
*
Vibrio splendidus LGP32

Site:
position = -138
score = 4.95809
sequence = AATGGTAAGACCAAA

Site:
position = -1
score = 6.06851
sequence = ATTGGTAATACCAAT

Gene: VS_2543: Transcriptional repressor for pyruvate dehydrogenase complex
*
Vibrio fischeri ES114

Site:
position = -215
score = 6.16931
sequence = ATTGGTCTTACCAAT

Site:
position = -80
score = 6.06851
sequence = ATTGGTAATACCAAT

Gene: VF_2182: Transcriptional repressor for pyruvate dehydrogenase complex
*
Vibrio salmonicida LFI1238

Site:
position = -216
score = 6.2701
sequence = ATTGGTCTGACCAAT

Site:
position = -81
score = 6.06851
sequence = ATTGGTATTACCAAT

Gene: VSAL_I2626: Transcriptional repressor for pyruvate dehydrogenase complex
*
Vibrio angustum S14

Site:
position = -70
score = 6.06851
sequence = ATTGGTAATACCAAT

Gene: VAS14_19981: Transcriptional repressor for pyruvate dehydrogenase complex
*
Photobacterium profundum SS9

Site:
position = -80
score = 6.16931
sequence = ATTGGTAAGACCAAT

Gene: PBPRA3197: Transcriptional repressor for pyruvate dehydrogenase complex
Transcriptional repressor for pyruvate dehydrogenase complex
aceE
 
Vibrio cholerae O1 biovar eltor str. N16961

Gene: VC2414: Pyruvate dehydrogenase E1 component (EC 1.2.4.1)
 
Vibrio vulnificus CMCP6

Gene: VV1_1630: Pyruvate dehydrogenase E1 component (EC 1.2.4.1)
 
Vibrio harveyi ATCC BAA-1116

Gene: VIBHAR_03464: Pyruvate dehydrogenase E1 component (EC 1.2.4.1)
 
Vibrio parahaemolyticus RIMD 2210633

Gene: VP2519: Pyruvate dehydrogenase E1 component (EC 1.2.4.1)
 
Vibrio shilonii AK1

Gene: VSAK1_04710: Pyruvate dehydrogenase E1 component (EC 1.2.4.1)
 
Vibrio splendidus LGP32

Gene: VS_2542: Pyruvate dehydrogenase E1 component (EC 1.2.4.1)
 
Vibrio fischeri ES114

Gene: VF_2181: Pyruvate dehydrogenase E1 component (EC 1.2.4.1)
 
Vibrio salmonicida LFI1238

Gene: VSAL_I2625: Pyruvate dehydrogenase E1 component (EC 1.2.4.1)
 
Vibrio angustum S14

Gene: VAS14_19986: Pyruvate dehydrogenase E1 component (EC 1.2.4.1)
 
Photobacterium profundum SS9

Gene: PBPRA3196: Pyruvate dehydrogenase E1 component (EC 1.2.4.1)
Pyruvate dehydrogenase E1 component (EC 1.2.4.1)
aceF
 
Vibrio cholerae O1 biovar eltor str. N16961

Gene: VC2413: Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12)
 
Vibrio vulnificus CMCP6

Gene: VV1_1631: Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12)
 
Vibrio harveyi ATCC BAA-1116

Gene: VIBHAR_03463: Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12)
 
Vibrio parahaemolyticus RIMD 2210633

Gene: VP2518: Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12)
 
Vibrio shilonii AK1

Gene: VSAK1_04715: Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12)
 
Vibrio splendidus LGP32

Gene: VS_2541: Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12)
 
Vibrio fischeri ES114

Gene: VF_2179: Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12)
 
Vibrio salmonicida LFI1238
 
Vibrio angustum S14

Gene: VAS14_19991: Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12)
 
Photobacterium profundum SS9

Gene: PBPRA3195: Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12)
Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12)
lpdA
 
Vibrio cholerae O1 biovar eltor str. N16961

Gene: VC2412: Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4)
 
Vibrio vulnificus CMCP6

Gene: VV1_1632: Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4)
 
Vibrio harveyi ATCC BAA-1116

Gene: VIBHAR_03462: Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4)
 
Vibrio parahaemolyticus RIMD 2210633

Gene: VP2517: Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4)
 
Vibrio shilonii AK1

Gene: VSAK1_04720: Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4)
 
Vibrio splendidus LGP32

Gene: VS_2540: Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4)
 
Vibrio fischeri ES114

Gene: VF_2178: Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4)
 
Vibrio salmonicida LFI1238

Gene: VSAL_I2623: Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4)
 
Vibrio angustum S14

Gene: VAS14_19996: Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4)
 
Photobacterium profundum SS9

Gene: PBPRA3194: Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4)
Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4)
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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