Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog NrdR - Burkholderia

Properties
Regulator type: Transcription factor
Regulator family: NrdR
Regulation mode: repressor
Biological process: Deoxyribonucleotide biosynthesis
Effector: Deoxyribonucleotides
Phylum: Proteobacteria/beta
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 20 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Burkholderia pseudomallei K96243 5 2
Burkholderia mallei ATCC 23344 5 2
Burkholderia sp. 383 2 1
Burkholderia cepacia AMMD 2 1
Burkholderia vietnamiensis G4 2 1
Burkholderia glumae BGR1 2 1
Burkholderia xenovorans LB400 3 1
Burkholderia phymatum STM815 2 1
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
nrdD
*
Burkholderia pseudomallei K96243

Site:
position = -37
score = 5.20871
sequence = TCACCAGATTTTGTGC

Site:
position = -68
score = 3.46136
sequence = ATACAACATCTGGTAT

Gene: BPSL2356: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
*
Burkholderia mallei ATCC 23344

Site:
position = -80
score = 3.46136
sequence = ATACAACATCTGGTAT

Site:
position = -49
score = 5.20871
sequence = TCACCAGATTTTGTGC

Gene: BMA0629: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
 
Burkholderia sp. 383
 
Burkholderia cepacia AMMD
 
Burkholderia vietnamiensis G4
 
Burkholderia glumae BGR1
 
Burkholderia xenovorans LB400
 
Burkholderia phymatum STM815
Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
BPSL2357
 
Burkholderia pseudomallei K96243

Gene: BPSL2357: hypothetical protein
 
Burkholderia mallei ATCC 23344

Gene: BMA0628: hypothetical protein
 
Burkholderia sp. 383
 
Burkholderia cepacia AMMD
 
Burkholderia vietnamiensis G4
 
Burkholderia glumae BGR1
 
Burkholderia xenovorans LB400
 
Burkholderia phymatum STM815
hypothetical protein
nrdG
 
Burkholderia pseudomallei K96243

Gene: BPSL2358: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)
 
Burkholderia mallei ATCC 23344

Gene: BMA0627: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)
 
Burkholderia sp. 383
 
Burkholderia cepacia AMMD
 
Burkholderia vietnamiensis G4
 
Burkholderia glumae BGR1
 
Burkholderia xenovorans LB400
 
Burkholderia phymatum STM815
Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)
 
CRON 2.
nrdA
*
Burkholderia pseudomallei K96243

Site:
position = -340
score = 5.32504
sequence = CCACTATACTTTGGGC

Site:
position = -309
score = 5.48331
sequence = GCACTACATATAGTGT

Gene: BPSL2992: Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)
*
Burkholderia mallei ATCC 23344

Site:
position = -340
score = 5.32504
sequence = CCACTATACTTTGGGC

Site:
position = -309
score = 5.48331
sequence = GCACTACATATAGTGT

Gene: BMA2510: Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)
*
Burkholderia sp. 383

Site:
position = -334
score = 5.68538
sequence = CCACTATACTTGGTGC

Site:
position = -303
score = 5.34313
sequence = GTACTAGATATAGTGT

Gene: Bcep18194_A3679: Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)
*
Burkholderia cepacia AMMD

Site:
position = -306
score = 5.34313
sequence = GTACTAGATATAGTGT

Site:
position = -337
score = 5.68538
sequence = CCACTATACTTGGTGC

Gene: Bamb_0497: Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)
*
Burkholderia vietnamiensis G4

Site:
position = -303
score = 5.34313
sequence = GTACTAGATATAGTGT

Site:
position = -334
score = 5.68538
sequence = CCACTATACTTGGTGC

Gene: Bcep1808_0570: Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)
*
Burkholderia glumae BGR1

Site:
position = -317
score = 5.68538
sequence = CCACTATACTTGGTGC

Site:
position = -286
score = 5.48331
sequence = TCACTAGATATAGTGT

Gene: bglu_1g04960: Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)
*
Burkholderia xenovorans LB400

Site:
position = -404
score = 5.68538
sequence = CCACTATACTTGGTGC

Site:
position = -373
score = 5.15005
sequence = GCACTACATCTTGTGT

Gene: Bxe_A0521: Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)
*
Burkholderia phymatum STM815

Site:
position = -351
score = 5.14215
sequence = ACACTATACTTCGTGC

Site:
position = -320
score = 4.91308
sequence = GCACAAGATGTAGTGT

Gene: Bphy_2639: Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)
Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)
Bxe_A0522
 
Burkholderia pseudomallei K96243
 
Burkholderia mallei ATCC 23344
 
Burkholderia sp. 383
 
Burkholderia cepacia AMMD
 
Burkholderia vietnamiensis G4
 
Burkholderia glumae BGR1
 
Burkholderia xenovorans LB400

Gene: Bxe_A0522: hypothetical protein
 
Burkholderia phymatum STM815
hypothetical protein
nrdB
 
Burkholderia pseudomallei K96243

Gene: BPSL2991: Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1)
 
Burkholderia mallei ATCC 23344

Gene: BMA2509: Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1)
 
Burkholderia sp. 383

Gene: Bcep18194_A3680: Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1)
 
Burkholderia cepacia AMMD

Gene: Bamb_0498: Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1)
 
Burkholderia vietnamiensis G4

Gene: Bcep1808_0571: Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1)
 
Burkholderia glumae BGR1

Gene: bglu_1g04970: Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1)
 
Burkholderia xenovorans LB400

Gene: Bxe_A0523: Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1)
 
Burkholderia phymatum STM815

Gene: Bphy_2638: Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1)
Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1)
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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