Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog HexR - Burkholderia

Properties
Regulator type: Transcription factor
Regulator family: RpiR
Regulation mode: repressor (activator)
Biological process: Central carbohydrate metabolism
Effector: 2-keto-3-deoxy-6-phosphogluconate
Phylum: Proteobacteria/beta
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 38 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Burkholderia pseudomallei K96243 6 3
Burkholderia mallei ATCC 23344 6 3
Burkholderia sp. 383 6 3
Burkholderia cepacia AMMD 6 3
Burkholderia vietnamiensis G4 6 3
Burkholderia glumae BGR1 6 3
Burkholderia xenovorans LB400 6 3
Burkholderia phymatum STM815 6 3
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
hexR
*
Burkholderia pseudomallei K96243

Site:
position = -69
score = 5.96796
sequence = TTGTAGATTTTCTACAA

Site:
position = -212
score = 5.54907
sequence = TAGTAGAAAAACTACAT

Gene: BPSL2933: Central carbohydrate metabolism transcription regulator HexR, RpiR family
*
Burkholderia mallei ATCC 23344

Site:
position = -69
score = 5.96796
sequence = TTGTAGATTTTCTACAA

Site:
position = -212
score = 5.54907
sequence = TAGTAGAAAAACTACAT

Gene: BMA2447: Central carbohydrate metabolism transcription regulator HexR, RpiR family
*
Burkholderia sp. 383

Site:
position = -200
score = 5.54907
sequence = TAGTAGAAAAACTACAT

Site:
position = -68
score = 5.96796
sequence = TTGTAGATTTTCTACAA

Gene: Bcep18194_A3745: Central carbohydrate metabolism transcription regulator HexR, RpiR family
*
Burkholderia cepacia AMMD

Site:
position = -210
score = 5.54907
sequence = TAGTAGAAAAACTACAT

Site:
position = -67
score = 5.83478
sequence = ATGTAGATTTTCTACAA

Gene: Bamb_0554: Central carbohydrate metabolism transcription regulator HexR, RpiR family
*
Burkholderia vietnamiensis G4

Site:
position = -69
score = 5.83478
sequence = ATGTAGATTTTCTACAA

Site:
position = -212
score = 5.68225
sequence = TAGTAGAAAAACTACAA

Gene: Bcep1808_0627: Central carbohydrate metabolism transcription regulator HexR, RpiR family
*
Burkholderia glumae BGR1

Site:
position = -205
score = 5.54907
sequence = TAGTAGAAAAACTACAT

Site:
position = -63
score = 5.29216
sequence = CTGTAGTTTTTCTACAA

Gene: bglu_1g05510: Central carbohydrate metabolism transcription regulator HexR, RpiR family
*
Burkholderia xenovorans LB400

Site:
position = -226
score = 5.54907
sequence = TAGTAGAAAAACTACAT

Gene: Bxe_A0588: Central carbohydrate metabolism transcription regulator HexR, RpiR family
*
Burkholderia phymatum STM815

Site:
position = -74
score = 4.83865
sequence = ATGTAGTTTTTGTACTT

Site:
position = -207
score = 5.22311
sequence = TAGTAGAAAAACTACAC

Gene: Bphy_2581: Central carbohydrate metabolism transcription regulator HexR, RpiR family
Central carbohydrate metabolism transcription regulator HexR, RpiR family
 
CRON 2.
edd
*
Burkholderia pseudomallei K96243

Site:
position = -245
score = 5.96796
sequence = TTGTAGAAAATCTACAA

Site:
position = -102
score = 5.54907
sequence = ATGTAGTTTTTCTACTA

Gene: BPSL2932: Phosphogluconate dehydratase (EC 4.2.1.12)
*
Burkholderia mallei ATCC 23344

Site:
position = -245
score = 5.96796
sequence = TTGTAGAAAATCTACAA

Site:
position = -102
score = 5.54907
sequence = ATGTAGTTTTTCTACTA

Gene: BMA2446: Phosphogluconate dehydratase (EC 4.2.1.12)
*
Burkholderia sp. 383

Site:
position = -231
score = 5.96796
sequence = TTGTAGAAAATCTACAA

Site:
position = -99
score = 5.54907
sequence = ATGTAGTTTTTCTACTA

Gene: Bcep18194_A3746: Phosphogluconate dehydratase (EC 4.2.1.12)
*
Burkholderia cepacia AMMD

Site:
position = -242
score = 5.83478
sequence = TTGTAGAAAATCTACAT

Site:
position = -99
score = 5.54907
sequence = ATGTAGTTTTTCTACTA

Gene: Bamb_0555: Phosphogluconate dehydratase (EC 4.2.1.12)
*
Burkholderia vietnamiensis G4

Site:
position = -243
score = 5.83478
sequence = TTGTAGAAAATCTACAT

Site:
position = -100
score = 5.68225
sequence = TTGTAGTTTTTCTACTA

Gene: Bcep1808_0628: Phosphogluconate dehydratase (EC 4.2.1.12)
*
Burkholderia glumae BGR1

Site:
position = -243
score = 5.29216
sequence = TTGTAGAAAAACTACAG

Site:
position = -101
score = 5.54907
sequence = ATGTAGTTTTTCTACTA

Gene: bglu_1g05520: Phosphogluconate dehydratase (EC 4.2.1.12)
*
Burkholderia xenovorans LB400

Site:
position = -105
score = 5.54907
sequence = ATGTAGTTTTTCTACTA

Gene: Bxe_A0589: Phosphogluconate dehydratase (EC 4.2.1.12)
*
Burkholderia phymatum STM815

Site:
position = -242
score = 4.83865
sequence = AAGTACAAAAACTACAT

Site:
position = -109
score = 5.22311
sequence = GTGTAGTTTTTCTACTA

Gene: Bphy_2580: Phosphogluconate dehydratase (EC 4.2.1.12)
Phosphogluconate dehydratase (EC 4.2.1.12)
eda
 
Burkholderia pseudomallei K96243

Gene: BPSL2931: 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14)
 
Burkholderia mallei ATCC 23344

Gene: BMA2445: 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14)
 
Burkholderia sp. 383

Gene: Bcep18194_A3747: 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14)
 
Burkholderia cepacia AMMD

Gene: Bamb_0556: 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14)
 
Burkholderia vietnamiensis G4

Gene: Bcep1808_0629: 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14)
 
Burkholderia glumae BGR1

Gene: bglu_1g05530: 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14)
 
Burkholderia xenovorans LB400

Gene: Bxe_A0590: 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14)
 
Burkholderia phymatum STM815

Gene: Bphy_2579: 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14)
2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14)
 
CRON 3.
zwf
*
Burkholderia pseudomallei K96243

Site:
position = -85
score = 5.68225
sequence = TTGTAGTTAAACTACAA

Gene: BPSL2612: Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
*
Burkholderia mallei ATCC 23344

Site:
position = -85
score = 5.68225
sequence = TTGTAGTTAAACTACAA

Gene: BMA2130: Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
*
Burkholderia sp. 383

Site:
position = -84
score = 5.68225
sequence = TTGTAGTTAAACTACAA

Gene: Bcep18194_A4070: Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
*
Burkholderia cepacia AMMD

Site:
position = -83
score = 5.68225
sequence = TTGTAGTTAAACTACAA

Gene: Bamb_0827: Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
*
Burkholderia vietnamiensis G4

Site:
position = -83
score = 5.68225
sequence = TTGTAGTTAAACTACAA

Gene: Bcep1808_0883: Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
*
Burkholderia glumae BGR1

Site:
position = -132
score = 5.68225
sequence = TTGTAGTTAAACTACAA

Gene: bglu_1g08060: Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
*
Burkholderia xenovorans LB400

Site:
position = -99
score = 5.68225
sequence = TTGTAGTTAAACTACAA

Gene: Bxe_A3452: Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
*
Burkholderia phymatum STM815

Site:
position = -87
score = 5.68225
sequence = TTGTAGTTAAACTACAA

Gene: Bphy_0627: Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
pgl
 
Burkholderia pseudomallei K96243

Gene: BPSL2613: 6-phosphogluconolactonase (EC 3.1.1.31), eukaryotic type
 
Burkholderia mallei ATCC 23344

Gene: BMA2131: 6-phosphogluconolactonase (EC 3.1.1.31), eukaryotic type
 
Burkholderia sp. 383

Gene: Bcep18194_A4069: 6-phosphogluconolactonase (EC 3.1.1.31), eukaryotic type
 
Burkholderia cepacia AMMD

Gene: Bamb_0826: 6-phosphogluconolactonase (EC 3.1.1.31), eukaryotic type
 
Burkholderia vietnamiensis G4

Gene: Bcep1808_0882: 6-phosphogluconolactonase (EC 3.1.1.31), eukaryotic type
 
Burkholderia glumae BGR1

Gene: bglu_1g08050: 6-phosphogluconolactonase (EC 3.1.1.31), eukaryotic type
 
Burkholderia xenovorans LB400

Gene: Bxe_A3453: 6-phosphogluconolactonase (EC 3.1.1.31), eukaryotic type
 
Burkholderia phymatum STM815

Gene: Bphy_0626: 6-phosphogluconolactonase (EC 3.1.1.31), eukaryotic type
6-phosphogluconolactonase (EC 3.1.1.31), eukaryotic type
glk
 
Burkholderia pseudomallei K96243

Gene: BPSL2614: Glucokinase (EC 2.7.1.2) / HTH-type transcriptional regulator HexR
 
Burkholderia mallei ATCC 23344

Gene: BMA2132: Glucokinase (EC 2.7.1.2) / HTH-type transcriptional regulator HexR
 
Burkholderia sp. 383

Gene: Bcep18194_A4068: Glucokinase (EC 2.7.1.2) / HTH-type transcriptional regulator HexR
 
Burkholderia cepacia AMMD

Gene: Bamb_0825: Glucokinase (EC 2.7.1.2) / HTH-type transcriptional regulator HexR
 
Burkholderia vietnamiensis G4

Gene: Bcep1808_0881: Glucokinase (EC 2.7.1.2) / HTH-type transcriptional regulator HexR
 
Burkholderia glumae BGR1

Gene: bglu_1g08040: Glucokinase (EC 2.7.1.2) / HTH-type transcriptional regulator HexR
 
Burkholderia xenovorans LB400

Gene: Bxe_A3454: Glucokinase (EC 2.7.1.2) / HTH-type transcriptional regulator HexR
 
Burkholderia phymatum STM815

Gene: Bphy_0625: Glucokinase (EC 2.7.1.2) / HTH-type transcriptional regulator HexR
Glucokinase (EC 2.7.1.2) / HTH-type transcriptional regulator HexR
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes [ Tab delimited format ] DOWNLOAD
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