Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog NsrR - Rhodospirillales

Properties
Regulator type: Transcription factor
Regulator family: Rrf2
Regulation mode: repressor
Biological process: Nitrosative stress response
Effector: Nitric oxide
Phylum: Proteobacteria/alpha
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 13 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Rhodospirillum rubrum ATCC 11170
Magnetospirillum magnetotacticum MS-1 2 2
Magnetospirillum magneticum AMB-1
Azospirillum sp. B510
Rhodospirillum centenum SW
Gluconacetobacter diazotrophicus PAl 5 3 2
Acetobacter pasteurianus IFO 3283-01 3 3
Gluconobacter oxydans 621H 2 2
Granulibacter bethesdensis CGDNIH1 2 2
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
nsrR
 
Rhodospirillum rubrum ATCC 11170
*
Magnetospirillum magnetotacticum MS-1

Site:
position = -41
score = 4.7544
sequence = GATGCAATTAAAATATACC

Site:
position = -81
score = 3.97468
sequence = GGTTCATTCGATATGAACC

Gene: Magn03002343: Nitrite-sensitive transcriptional repressor NsrR
 
Magnetospirillum magneticum AMB-1
 
Azospirillum sp. B510
 
Rhodospirillum centenum SW
*
Gluconacetobacter diazotrophicus PAl 5

Site:
position = -65
score = 4.67978
sequence = GATGTAAAAACGATGCATC

Gene: Gdia_1513: Nitrite-sensitive transcriptional repressor NsrR
*
Acetobacter pasteurianus IFO 3283-01

Site:
position = -31
score = 4.93894
sequence = GATGTGTTTTTAAGGCATC

Gene: APA01_05530: Nitrite-sensitive transcriptional repressor NsrR
*
Gluconobacter oxydans 621H

Site:
position = -64
score = 5.41547
sequence = GGTTTATTTGAAATACATC

Gene: GOX0860: Nitrite-sensitive transcriptional repressor NsrR
*
Granulibacter bethesdensis CGDNIH1

Site:
position = -90
score = 5.15579
sequence = AAGGTATATAAAATGCATC

Gene: GbCGDNIH1_1673: Nitrite-sensitive transcriptional repressor NsrR
Nitrite-sensitive transcriptional repressor NsrR
 
CRON 2.
hmp
 
Rhodospirillum rubrum ATCC 11170
*
Magnetospirillum magnetotacticum MS-1

Site:
position = -72
score = 4.7544
sequence = GGTATATTTTAATTGCATC

Site:
position = -32
score = 3.97468
sequence = GGTTCATATCGAATGAACC

Gene: Magn03002344: Flavohemoprotein (Hemoglobin-like protein) (Flavohemoglobin) (Nitric oxide dioxygenase) (EC 1.14.12.17)
 
Magnetospirillum magneticum AMB-1
 
Azospirillum sp. B510
 
Rhodospirillum centenum SW
*
Gluconacetobacter diazotrophicus PAl 5

Site:
position = -32
score = 4.67978
sequence = GATGCATCGTTTTTACATC

Gene: Gdia_1514: Flavohemoprotein (Hemoglobin-like protein) (Flavohemoglobin) (Nitric oxide dioxygenase) (EC 1.14.12.17)
*
Acetobacter pasteurianus IFO 3283-01

Site:
position = 22
score = 4.38535
sequence = GATGCATCGCATTGACACC

Gene: APA01_21890: Flavohemoprotein (Hemoglobin-like protein) (Flavohemoglobin) (Nitric oxide dioxygenase) (EC 1.14.12.17)
*
Gluconobacter oxydans 621H

Site:
position = -35
score = 5.41547
sequence = GATGTATTTCAAATAAACC

Gene: GOX0861: Flavohemoprotein (Hemoglobin-like protein) (Flavohemoglobin) (Nitric oxide dioxygenase) (EC 1.14.12.17)
*
Granulibacter bethesdensis CGDNIH1

Site:
position = -62
score = 5.15579
sequence = GATGCATTTTATATACCTT

Gene: GbCGDNIH1_1674: Flavohemoprotein (Hemoglobin-like protein) (Flavohemoglobin) (Nitric oxide dioxygenase) (EC 1.14.12.17)
Flavohemoprotein (Hemoglobin-like protein) (Flavohemoglobin) (Nitric oxide dioxygenase) (EC 1.14.12.17)
PF04343
 
Rhodospirillum rubrum ATCC 11170
 
Magnetospirillum magnetotacticum MS-1
 
Magnetospirillum magneticum AMB-1
 
Azospirillum sp. B510
 
Rhodospirillum centenum SW
 
Gluconacetobacter diazotrophicus PAl 5

Gene: Gdia_1515: protein of unknown function DUF488
*
Acetobacter pasteurianus IFO 3283-01

Site:
position = -69
score = 4.93894
sequence = GATGCCTTAAAAACACATC

Gene: APA01_05520: protein of unknown function DUF488
 
Gluconobacter oxydans 621H
 
Granulibacter bethesdensis CGDNIH1
protein of unknown function DUF488
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD