Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog NsrR2 - Various betaproteobacteria

Properties
Regulator type: Transcription factor
Regulator family: Rrf2
Regulation mode: repressor
Biological process: Nitrosative stress response
Effector: Nitric oxide
Phylum: Proteobacteria/beta
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 16 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Azoarcus sp. EbN1
Thauera sp. MZ1T 3 2
Dechloromonas aromatica RCB
Nitrosomonas europaea ATCC 19718 5 2
Nitrosospira multiformis ATCC 25196
Thiobacillus denitrificans 1 1
Chromobacterium violaceum ATCC 12472 7 4
Neisseria meningitidis MC58
Laribacter hongkongensis HLHK9
Methylobacillus flagellatus KT 1 1
Methylotenera mobilis JLW8 2 2
Methylophilales bacterium HTCC2181
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
Tmz1t_0413
 
Azoarcus sp. EbN1
*
Thauera sp. MZ1T

Site:
position = -46
score = 5.75833
sequence = GATGCATTTAATATGTATC

Gene: Tmz1t_0413: Hemerythrin HHE cation binding domain protein
 
Dechloromonas aromatica RCB
 
Nitrosomonas europaea ATCC 19718
 
Nitrosospira multiformis ATCC 25196
 
Thiobacillus denitrificans
 
Chromobacterium violaceum ATCC 12472
 
Neisseria meningitidis MC58

Gene: NMB0438: Hemerythrin HHE cation binding domain protein
 
Laribacter hongkongensis HLHK9
 
Methylobacillus flagellatus KT
 
Methylotenera mobilis JLW8
 
Methylophilales bacterium HTCC2181
Hemerythrin HHE cation binding domain protein
fdxA
 
Azoarcus sp. EbN1

Gene: ebB155: 4Fe-4S ferredoxin, iron-sulfur binding
 
Thauera sp. MZ1T

Gene: Tmz1t_0414: 4Fe-4S ferredoxin, iron-sulfur binding
 
Dechloromonas aromatica RCB
 
Nitrosomonas europaea ATCC 19718
 
Nitrosospira multiformis ATCC 25196
 
Thiobacillus denitrificans
 
Chromobacterium violaceum ATCC 12472
 
Neisseria meningitidis MC58
 
Laribacter hongkongensis HLHK9

Gene: LHK_00641: 4Fe-4S ferredoxin, iron-sulfur binding
 
Methylobacillus flagellatus KT
 
Methylotenera mobilis JLW8
 
Methylophilales bacterium HTCC2181
4Fe-4S ferredoxin, iron-sulfur binding
 
CRON 2.
hmp
 
Azoarcus sp. EbN1
 
Thauera sp. MZ1T
 
Dechloromonas aromatica RCB
 
Nitrosomonas europaea ATCC 19718
 
Nitrosospira multiformis ATCC 25196
*
Thiobacillus denitrificans

Site:
position = -48
score = 5.68654
sequence = CATGCATACGGTATGCATG

Gene: Tbd_2329: Flavohemoprotein (Hemoglobin-like protein) (Flavohemoglobin) (Nitric oxide dioxygenase) (EC 1.14.12.17)
*
Chromobacterium violaceum ATCC 12472

Site:
position = -32
score = 3.4874
sequence = GATGTATTTTTTAAATATC

Site:
position = -96
score = 2.68385
sequence = CATGTATTATTTGAACATC

Gene: CV3488: Flavohemoprotein (Hemoglobin-like protein) (Flavohemoglobin) (Nitric oxide dioxygenase) (EC 1.14.12.17)
 
Neisseria meningitidis MC58
 
Laribacter hongkongensis HLHK9
*
Methylobacillus flagellatus KT

Site:
position = -32
score = 4.23781
sequence = GTTTCCTATTAAATACAAC

Gene: Mfla_0639: Flavohemoprotein (Hemoglobin-like protein) (Flavohemoglobin) (Nitric oxide dioxygenase) (EC 1.14.12.17)
*
Methylotenera mobilis JLW8

Site:
position = -36
score = 5.54928
sequence = GTAGCATTTTAAATGCAAC

Gene: Mmol_1063: Flavohemoprotein (Hemoglobin-like protein) (Flavohemoglobin) (Nitric oxide dioxygenase) (EC 1.14.12.17)
 
Methylophilales bacterium HTCC2181
Flavohemoprotein (Hemoglobin-like protein) (Flavohemoglobin) (Nitric oxide dioxygenase) (EC 1.14.12.17)
nsrR
 
Azoarcus sp. EbN1
*
Thauera sp. MZ1T

Site:
position = -93
score = 5.75833
sequence = GATACATATTAAATGCATC

Gene: Tmz1t_0412: Nitrite-sensitive transcriptional repressor NsrR
 
Dechloromonas aromatica RCB
*
Nitrosomonas europaea ATCC 19718

Site:
position = -218
score = 4.02575
sequence = GGTGTATATTAGATACATC

Site:
position = -125
score = 3.13051
sequence = GATATATTATTAATATATC

Gene: NE0928: Nitrite-sensitive transcriptional repressor NsrR
 
Nitrosospira multiformis ATCC 25196
 
Thiobacillus denitrificans

Gene: Tbd_2014: Nitrite-sensitive transcriptional repressor NsrR
 
Chromobacterium violaceum ATCC 12472

Gene: CV3487: Nitrite-sensitive transcriptional repressor NsrR
 
Neisseria meningitidis MC58

Gene: NMB0437: Nitrite-sensitive transcriptional repressor NsrR
 
Laribacter hongkongensis HLHK9
 
Methylobacillus flagellatus KT

Gene: Mfla_0640: Nitrite-sensitive transcriptional repressor NsrR
*
Methylotenera mobilis JLW8

Site:
position = -41
score = 5.96981
sequence = GTTGCATATTAAATGCAAC

Gene: Mmol_1062: Nitrite-sensitive transcriptional repressor NsrR
 
Methylophilales bacterium HTCC2181
Nitrite-sensitive transcriptional repressor NsrR
 
CRON 3.
nirK
 
Azoarcus sp. EbN1
 
Thauera sp. MZ1T
 
Dechloromonas aromatica RCB
*2
Nitrosomonas europaea ATCC 19718

Gene: NE0924: Copper-containing nitrite reductase (EC 1.7.2.1)

Site:
position = -94
score = 3.13051
sequence = GATATATTAATAATATATC

Site:
position = -1
score = 4.02575
sequence = GATGTATCTAATATACACC

Gene: NE0927: Copper-containing nitrite reductase (EC 1.7.2.1)
 
Nitrosospira multiformis ATCC 25196

Gene: Nmul_A1998: Copper-containing nitrite reductase (EC 1.7.2.1)
 
Thiobacillus denitrificans
*
Chromobacterium violaceum ATCC 12472

Site:
position = -74
score = 3.92294
sequence = CATGTATTAATTATGCATT

Gene: CV2007: Copper-containing nitrite reductase (EC 1.7.2.1)
 
Neisseria meningitidis MC58

Gene: NMB1623: Copper-containing nitrite reductase (EC 1.7.2.1)
 
Laribacter hongkongensis HLHK9
 
Methylobacillus flagellatus KT
 
Methylotenera mobilis JLW8

Gene: Mmol_1061: Copper-containing nitrite reductase (EC 1.7.2.1)
 
Methylophilales bacterium HTCC2181
Copper-containing nitrite reductase (EC 1.7.2.1)
NE0926
 
Azoarcus sp. EbN1
 
Thauera sp. MZ1T
 
Dechloromonas aromatica RCB
 
Nitrosomonas europaea ATCC 19718

Gene: NE0926: Cytochrome c, class I
 
Nitrosospira multiformis ATCC 25196
 
Thiobacillus denitrificans
 
Chromobacterium violaceum ATCC 12472
 
Neisseria meningitidis MC58
 
Laribacter hongkongensis HLHK9
 
Methylobacillus flagellatus KT
 
Methylotenera mobilis JLW8
 
Methylophilales bacterium HTCC2181
Cytochrome c, class I
cccA
 
Azoarcus sp. EbN1
 
Thauera sp. MZ1T
 
Dechloromonas aromatica RCB
 
Nitrosomonas europaea ATCC 19718

Gene: NE0925: Cytochrome c, class I
 
Nitrosospira multiformis ATCC 25196
 
Thiobacillus denitrificans
 
Chromobacterium violaceum ATCC 12472
 
Neisseria meningitidis MC58
 
Laribacter hongkongensis HLHK9
 
Methylobacillus flagellatus KT
 
Methylotenera mobilis JLW8
 
Methylophilales bacterium HTCC2181
Cytochrome c, class I
PF03781
 
Azoarcus sp. EbN1
 
Thauera sp. MZ1T
 
Dechloromonas aromatica RCB
 
Nitrosomonas europaea ATCC 19718
 
Nitrosospira multiformis ATCC 25196
 
Thiobacillus denitrificans
 
Chromobacterium violaceum ATCC 12472

Gene: CV2008: Probable signal peptide protein
 
Neisseria meningitidis MC58

Gene: NMB1624: Probable signal peptide protein
 
Laribacter hongkongensis HLHK9
 
Methylobacillus flagellatus KT
 
Methylotenera mobilis JLW8

Gene: Mmol_1060: Probable signal peptide protein
 
Methylophilales bacterium HTCC2181
Probable signal peptide protein
PF02630
 
Azoarcus sp. EbN1
 
Thauera sp. MZ1T
 
Dechloromonas aromatica RCB
 
Nitrosomonas europaea ATCC 19718
 
Nitrosospira multiformis ATCC 25196
 
Thiobacillus denitrificans
 
Chromobacterium violaceum ATCC 12472

Gene: CV2009: Copper chaperone, SCO1/SenC family protein
 
Neisseria meningitidis MC58
 
Laribacter hongkongensis HLHK9
 
Methylobacillus flagellatus KT
 
Methylotenera mobilis JLW8

Gene: Mmol_1059: Copper chaperone, SCO1/SenC family protein
 
Methylophilales bacterium HTCC2181
Copper chaperone, SCO1/SenC family protein
 
CRON 4.
norB
 
Azoarcus sp. EbN1
 
Thauera sp. MZ1T
 
Dechloromonas aromatica RCB
 
Nitrosomonas europaea ATCC 19718
 
Nitrosospira multiformis ATCC 25196
 
Thiobacillus denitrificans
*
Chromobacterium violaceum ATCC 12472

Site:
position = -85
score = 3.34322
sequence = GATGTGCAATATATACATC

Site:
position = -59
score = 4.60123
sequence = GATGCATGTATTCTGCATC

Gene: CV3494: Nitric-oxide reductase (EC 1.7.99.7), quinol-dependent
 
Neisseria meningitidis MC58
 
Laribacter hongkongensis HLHK9
 
Methylobacillus flagellatus KT
 
Methylotenera mobilis JLW8
 
Methylophilales bacterium HTCC2181
Nitric-oxide reductase (EC 1.7.99.7), quinol-dependent
 
CRON 5.
nasA
 
Azoarcus sp. EbN1

Gene: ebA1213: Nitrate/nitrite transporter
 
Thauera sp. MZ1T

Gene: Tmz1t_1145: Nitrate/nitrite transporter
 
Dechloromonas aromatica RCB
 
Nitrosomonas europaea ATCC 19718
 
Nitrosospira multiformis ATCC 25196
 
Thiobacillus denitrificans
*
Chromobacterium violaceum ATCC 12472

Site:
position = -31
score = 5.48016
sequence = CATGCAAACCATATGCATG

Gene: CV2228: Nitrate/nitrite transporter
 
Neisseria meningitidis MC58
 
Laribacter hongkongensis HLHK9
 
Methylobacillus flagellatus KT
 
Methylotenera mobilis JLW8

Gene: Mmol_1651: Nitrate/nitrite transporter
 
Methylophilales bacterium HTCC2181
Nitrate/nitrite transporter
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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