Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog NsrR - Burkholderia

Properties
Regulator type: Transcription factor
Regulator family: Rrf2
Regulation mode: repressor
Biological process: Nitrosative stress response
Effector: Nitric oxide
Phylum: Proteobacteria/beta
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 23 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Burkholderia pseudomallei K96243 5 5
Burkholderia mallei ATCC 23344 4 4
Burkholderia sp. 383 3 2
Burkholderia cepacia AMMD 3 2
Burkholderia vietnamiensis G4 7 3
Burkholderia glumae BGR1 3 2
Burkholderia xenovorans LB400 2 2
Burkholderia phymatum STM815 4 3
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
norB
*
Burkholderia pseudomallei K96243

Site:
position = -93
score = 4.56835
sequence = CATACATTCTTTGTACATG

Gene: BPSL2351: Nitric-oxide reductase (EC 1.7.99.7), quinol-dependent
*
Burkholderia mallei ATCC 23344

Site:
position = -93
score = 4.56835
sequence = CATACATTCTTTGTACATG

Gene: BMA0633: Nitric-oxide reductase (EC 1.7.99.7), quinol-dependent
 
Burkholderia sp. 383
 
Burkholderia cepacia AMMD
 
Burkholderia vietnamiensis G4
 
Burkholderia glumae BGR1
 
Burkholderia xenovorans LB400
 
Burkholderia phymatum STM815
Nitric-oxide reductase (EC 1.7.99.7), quinol-dependent
 
CRON 2.
nsrR2
 
Burkholderia pseudomallei K96243
 
Burkholderia mallei ATCC 23344
 
Burkholderia sp. 383
 
Burkholderia cepacia AMMD
*
Burkholderia vietnamiensis G4

Site:
position = -87
score = 4.22009
sequence = GAAGTATTTTTAATGCATG

Gene: Bcep1808_6181: Nitrite-sensitive transcriptional repressor NsrR
 
Burkholderia glumae BGR1
 
Burkholderia xenovorans LB400
 
Burkholderia phymatum STM815
Nitrite-sensitive transcriptional repressor NsrR
nnrS
*2
Burkholderia pseudomallei K96243

Site:
position = -36
score = 5.01668
sequence = GATACATAATAAATGCATC

Gene: BPSL2368: NnrS protein involved in response to NO

Site:
position = -39
score = 4.64399
sequence = CATGCATCAAGAAAGCAAC

Gene: BPSL2355: NnrS protein involved in response to NO
*2
Burkholderia mallei ATCC 23344

Site:
position = -12
score = 5.01668
sequence = GATACATAATAAATGCATC

Gene: BMA0614: NnrS protein involved in response to NO

Site:
position = -39
score = 4.64399
sequence = CATGCATCAAGAAAGCAAC

Gene: BMA0630: NnrS protein involved in response to NO
 
Burkholderia sp. 383
 
Burkholderia cepacia AMMD
 
Burkholderia vietnamiensis G4

Gene: Bcep1808_6182: NnrS protein involved in response to NO
 
Burkholderia glumae BGR1
 
Burkholderia xenovorans LB400
 
Burkholderia phymatum STM815
NnrS protein involved in response to NO
PF01814
 
Burkholderia pseudomallei K96243
 
Burkholderia mallei ATCC 23344
 
Burkholderia sp. 383
 
Burkholderia cepacia AMMD
 
Burkholderia vietnamiensis G4

Gene: Bcep1808_6183: hemerythrin HHE cation binding domain-containing protein
 
Burkholderia glumae BGR1
 
Burkholderia xenovorans LB400
 
Burkholderia phymatum STM815
hemerythrin HHE cation binding domain-containing protein
PF10006
*
Burkholderia pseudomallei K96243

Site:
position = -144
score = 4.5495
sequence = GTTGCTCACAATATGCATC

Gene: BPSS1139: hypothetical protein
 
Burkholderia mallei ATCC 23344
 
Burkholderia sp. 383
 
Burkholderia cepacia AMMD
 
Burkholderia vietnamiensis G4

Gene: Bcep1808_6184: hypothetical protein
 
Burkholderia glumae BGR1
 
Burkholderia xenovorans LB400
 
Burkholderia phymatum STM815
hypothetical protein
 
CRON 3.
hcp
 
Burkholderia pseudomallei K96243
 
Burkholderia mallei ATCC 23344
*
Burkholderia sp. 383

Site:
position = -111
score = 4.82242
sequence = GATGCATACGCAACGCATC

Gene: Bcep18194_B1121: Hydroxylamine reductase (EC 1.7.-.-)
*
Burkholderia cepacia AMMD

Site:
position = -111
score = 4.8585
sequence = GATGCATCAGAGAAGCATC

Gene: Bamb_4090: Hydroxylamine reductase (EC 1.7.-.-)
*
Burkholderia vietnamiensis G4

Site:
position = -109
score = 5.17024
sequence = GATGCATAAAGAACGCATC

Gene: Bcep1808_5223: Hydroxylamine reductase (EC 1.7.-.-)
*
Burkholderia glumae BGR1

Site:
position = -110
score = 4.92499
sequence = GATGCATGAATGACGCATC

Gene: bglu_2g04830: Hydroxylamine reductase (EC 1.7.-.-)
 
Burkholderia xenovorans LB400
*
Burkholderia phymatum STM815

Site:
position = -67
score = 3.80219
sequence = CATGCGCAGACGATCCATA

Gene: Bphy_6194: Hydroxylamine reductase (EC 1.7.-.-)
Hydroxylamine reductase (EC 1.7.-.-)
hcr
 
Burkholderia pseudomallei K96243
 
Burkholderia mallei ATCC 23344
 
Burkholderia sp. 383

Gene: Bcep18194_B1122: NADH oxidoreductase hcr (EC 1.-.-.-)
 
Burkholderia cepacia AMMD

Gene: Bamb_4089: NADH oxidoreductase hcr (EC 1.-.-.-)
 
Burkholderia vietnamiensis G4

Gene: Bcep1808_5222: NADH oxidoreductase hcr (EC 1.-.-.-)
 
Burkholderia glumae BGR1

Gene: bglu_2g04840: NADH oxidoreductase hcr (EC 1.-.-.-)
 
Burkholderia xenovorans LB400
 
Burkholderia phymatum STM815

Gene: Bphy_6193: NADH oxidoreductase hcr (EC 1.-.-.-)
NADH oxidoreductase hcr (EC 1.-.-.-)
 
CRON 4.
nsrR
 
Burkholderia pseudomallei K96243

Gene: BPSL1483: Nitrite-sensitive transcriptional repressor NsrR
 
Burkholderia mallei ATCC 23344

Gene: BMA1378: Nitrite-sensitive transcriptional repressor NsrR
 
Burkholderia sp. 383

Gene: Bcep18194_A5149: Nitrite-sensitive transcriptional repressor NsrR
 
Burkholderia cepacia AMMD

Gene: Bamb_1786: Nitrite-sensitive transcriptional repressor NsrR
 
Burkholderia vietnamiensis G4

Gene: Bcep1808_1775: Nitrite-sensitive transcriptional repressor NsrR
 
Burkholderia glumae BGR1

Gene: bglu_1g14220: Nitrite-sensitive transcriptional repressor NsrR
*
Burkholderia xenovorans LB400

Site:
position = -107
score = 3.81954
sequence = CATGCGTAGCGCCTGCATC

Gene: Bxe_A2375: Nitrite-sensitive transcriptional repressor NsrR
*
Burkholderia phymatum STM815

Site:
position = -70
score = 4.31239
sequence = GATGTGTTTTAAAAGCATG

Gene: Bphy_0937: Nitrite-sensitive transcriptional repressor NsrR
Nitrite-sensitive transcriptional repressor NsrR
 
CRON 5.
PF01152
 
Burkholderia pseudomallei K96243

Gene: BPSL1482: Truncated hemoglobins
 
Burkholderia mallei ATCC 23344
 
Burkholderia sp. 383

Gene: Bcep18194_A5150: Truncated hemoglobins
 
Burkholderia cepacia AMMD

Gene: Bamb_1787: Truncated hemoglobins
 
Burkholderia vietnamiensis G4

Gene: Bcep1808_1776: Truncated hemoglobins
 
Burkholderia glumae BGR1

Gene: bglu_1g14210: Truncated hemoglobins
*
Burkholderia xenovorans LB400

Site:
position = -218
score = 3.81954
sequence = GATGCAGGCGCTACGCATG

Gene: Bxe_A2376: Truncated hemoglobins
*
Burkholderia phymatum STM815

Site:
position = -156
score = 4.31239
sequence = CATGCTTTTAAAACACATC

Gene: Bphy_0936: Truncated hemoglobins
Truncated hemoglobins
 
CRON 6.
hmp
*
Burkholderia pseudomallei K96243

Site:
position = -39
score = 4.4267
sequence = GATGTATCGTTTGCGAATG

Gene: BPSL2840: Flavohemoprotein (Hemoglobin-like protein) (Flavohemoglobin) (Nitric oxide dioxygenase) (EC 1.14.12.17)
*
Burkholderia mallei ATCC 23344

Site:
position = -39
score = 4.4267
sequence = GATGTATCGTTTGCGAATG

Gene: BMA2417: Flavohemoprotein (Hemoglobin-like protein) (Flavohemoglobin) (Nitric oxide dioxygenase) (EC 1.14.12.17)
*
Burkholderia sp. 383

Site:
position = -36
score = 4.8642
sequence = GATGTATCGTATGTGCATG

Gene: Bcep18194_A3823: Flavohemoprotein (Hemoglobin-like protein) (Flavohemoglobin) (Nitric oxide dioxygenase) (EC 1.14.12.17)
*
Burkholderia cepacia AMMD

Site:
position = -36
score = 4.8642
sequence = GATGTATCGTATGTGCATG

Gene: Bamb_0627: Flavohemoprotein (Hemoglobin-like protein) (Flavohemoglobin) (Nitric oxide dioxygenase) (EC 1.14.12.17)
*
Burkholderia vietnamiensis G4

Site:
position = -35
score = 4.69109
sequence = CATGTATCGTTTGAGCATG

Gene: Bcep1808_0698: Flavohemoprotein (Hemoglobin-like protein) (Flavohemoglobin) (Nitric oxide dioxygenase) (EC 1.14.12.17)
*
Burkholderia glumae BGR1

Site:
position = -48
score = 4.37861
sequence = AATGTATCGTGTATGAATC

Gene: bglu_1g06210: Flavohemoprotein (Hemoglobin-like protein) (Flavohemoglobin) (Nitric oxide dioxygenase) (EC 1.14.12.17)
 
Burkholderia xenovorans LB400

Gene: Bxe_B2333: Flavohemoprotein (Hemoglobin-like protein) (Flavohemoglobin) (Nitric oxide dioxygenase) (EC 1.14.12.17)
 
Burkholderia phymatum STM815

Gene: Bphy_4026: Flavohemoprotein (Hemoglobin-like protein) (Flavohemoglobin) (Nitric oxide dioxygenase) (EC 1.14.12.17)
Flavohemoprotein (Hemoglobin-like protein) (Flavohemoglobin) (Nitric oxide dioxygenase) (EC 1.14.12.17)
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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