Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog FabR - Oceanospirillales/Alteromonadales

Properties
Regulator type: Transcription factor
Regulator family: TetR
Regulation mode: repressor
Biological process: Fatty acid biosynthesis
Effector: Unsaturated acyl-ACP; Unsaturated acyl-CoA
Phylum: Proteobacteria/gamma
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 8 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Hahella chejuensis KCTC 2396 1 1
Marinobacter aqueolei 5 5
Marinobacter sp. ELB17 2 2
Oceanobacter sp. RED65
Oceanospirillum sp. MED92
Marinomonas sp. MWYL1
Saccharophagus degradans 2-40
Teredinibacter turnerae T7901
Cellvibrio japonicus Ueda107
Chromohalobacter salexigens DSM 3043
Reinekea sp. MED297
Alcanivorax borkumensis SK2
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
desA
 
Hahella chejuensis KCTC 2396
*
Marinobacter aqueolei

Site:
position = -71
score = 5.57894
sequence = AGCTAACAAGTGTGCGCT

Gene: Maqu_2215: Fatty acid desaturase (EC 1.14.99.-)
 
Marinobacter sp. ELB17
 
Oceanobacter sp. RED65
 
Oceanospirillum sp. MED92
 
Marinomonas sp. MWYL1
 
Saccharophagus degradans 2-40
 
Teredinibacter turnerae T7901
 
Cellvibrio japonicus Ueda107
 
Chromohalobacter salexigens DSM 3043
 
Reinekea sp. MED297
 
Alcanivorax borkumensis SK2
Fatty acid desaturase (EC 1.14.99.-)
 
CRON 2.
hyIII
 
Hahella chejuensis KCTC 2396

Gene: HCH_04808: COG1272: Predicted membrane protein hemolysin III homolog
*
Marinobacter aqueolei

Site:
position = -75
score = 5.84555
sequence = TGCGTACACTTGTACGCT

Gene: Maqu_3135: COG1272: Predicted membrane protein hemolysin III homolog
 
Marinobacter sp. ELB17
 
Oceanobacter sp. RED65
 
Oceanospirillum sp. MED92
 
Marinomonas sp. MWYL1

Gene: Mmwyl1_3326: COG1272: Predicted membrane protein hemolysin III homolog
 
Saccharophagus degradans 2-40
 
Teredinibacter turnerae T7901
 
Cellvibrio japonicus Ueda107
 
Chromohalobacter salexigens DSM 3043

Gene: Csal_0114: COG1272: Predicted membrane protein hemolysin III homolog
 
Reinekea sp. MED297

Gene: MED297_00660: COG1272: Predicted membrane protein hemolysin III homolog
 
Alcanivorax borkumensis SK2

Gene: ABO_2634: COG1272: Predicted membrane protein hemolysin III homolog
COG1272: Predicted membrane protein hemolysin III homolog
 
CRON 3.
Maqu_3149
 
Hahella chejuensis KCTC 2396
*
Marinobacter aqueolei

Site:
position = -65
score = 5.76157
sequence = GGCTAACATGTGTACGCT

Gene: Maqu_3149: AraC family transcriptional regulator
*
Marinobacter sp. ELB17

Site:
position = -94
score = 6.00433
sequence = AGCTAACATCTGTACGCT

Gene: MELB17_04227: AraC family transcriptional regulator
 
Oceanobacter sp. RED65
 
Oceanospirillum sp. MED92
 
Marinomonas sp. MWYL1
 
Saccharophagus degradans 2-40
 
Teredinibacter turnerae T7901
 
Cellvibrio japonicus Ueda107
 
Chromohalobacter salexigens DSM 3043
 
Reinekea sp. MED297
 
Alcanivorax borkumensis SK2
AraC family transcriptional regulator
 
CRON 4.
plsC
 
Hahella chejuensis KCTC 2396
*
Marinobacter aqueolei

Site:
position = -45
score = 5.21066
sequence = GGCGTACACTTGTGCGCC

Gene: Maqu_3682: 1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51)
*
Marinobacter sp. ELB17

Site:
position = -46
score = 5.21066
sequence = GGCGTACACTTGTGCGCC

Gene: MELB17_01980: 1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51)
 
Oceanobacter sp. RED65

Gene: RED65_12104: 1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51)
 
Oceanospirillum sp. MED92
 
Marinomonas sp. MWYL1

Gene: Mmwyl1_4060: 1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51)
 
Saccharophagus degradans 2-40
 
Teredinibacter turnerae T7901
 
Cellvibrio japonicus Ueda107
 
Chromohalobacter salexigens DSM 3043
 
Reinekea sp. MED297
 
Alcanivorax borkumensis SK2
1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51)
 
CRON 5.
OLE1
*
Hahella chejuensis KCTC 2396

Site:
position = -51
score = 6.41738
sequence = AGCGTACACTTGTACGCT

Gene: HCH_00568: Fatty acid desaturase (EC 1.14.19.1)
*
Marinobacter aqueolei

Site:
position = -109
score = 6.10392
sequence = GGCTTACACCTGTACGCT

Gene: Maqu_3748: Fatty acid desaturase (EC 1.14.19.1)
 
Marinobacter sp. ELB17
 
Oceanobacter sp. RED65

Gene: RED65_11650: Fatty acid desaturase (EC 1.14.19.1)
 
Oceanospirillum sp. MED92
 
Marinomonas sp. MWYL1
 
Saccharophagus degradans 2-40
 
Teredinibacter turnerae T7901
 
Cellvibrio japonicus Ueda107
 
Chromohalobacter salexigens DSM 3043
 
Reinekea sp. MED297
 
Alcanivorax borkumensis SK2

Gene: ABO_2585: Fatty acid desaturase (EC 1.14.19.1)
Fatty acid desaturase (EC 1.14.19.1)
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD