Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog FabR - Psychromonadaceae/Aeromonadales

Properties
Regulator type: Transcription factor
Regulator family: TetR
Regulation mode: repressor
Biological process: Fatty acid biosynthesis
Effector: Unsaturated acyl-ACP; Unsaturated acyl-CoA
Phylum: Proteobacteria/gamma
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 27 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Psychromonas ingrahamii 37 2 2
Psychromonas sp. CNPT3
Moritella sp. PE36 9 7
Aeromonas hydrophila subsp. hydrophila ATCC 7966 7 7
Aeromonas salmonicida subsp. salmonicida A449 7 7
Tolumonas auensis DSM 9187
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
fabR
*
Psychromonas ingrahamii 37

Site:
position = -179
score = 5.37784
sequence = AGCGTACAGATGTACACC

Gene: Ping_1493: Unsaturated fatty acid biosythesis repressor FabR, TetR family
 
Psychromonas sp. CNPT3
 
Moritella sp. PE36

Gene: PE36_23812: Unsaturated fatty acid biosythesis repressor FabR, TetR family
*
Aeromonas hydrophila subsp. hydrophila ATCC 7966

Site:
position = -131
score = 5.3758
sequence = AGCGAACAGCTGTGCGCC

Gene: AHA_0367: Unsaturated fatty acid biosythesis repressor FabR, TetR family
*
Aeromonas salmonicida subsp. salmonicida A449

Site:
position = -132
score = 5.3758
sequence = AGCGAACAGCTGTGCGCC

Gene: ASA_3965: Unsaturated fatty acid biosythesis repressor FabR, TetR family
 
Tolumonas auensis DSM 9187
Unsaturated fatty acid biosythesis repressor FabR, TetR family
 
CRON 2.
fadL
 
Psychromonas ingrahamii 37
 
Psychromonas sp. CNPT3
 
Moritella sp. PE36
*
Aeromonas hydrophila subsp. hydrophila ATCC 7966

Site:
position = -192
score = 4.26322
sequence = AGCGTACACCTGTAGTAA

Site:
position = -179
score = 5.03078
sequence = AGTAAACAACTGTACGCT

Gene: AHA_2144: Long-chain fatty acid transport protein
*
Aeromonas salmonicida subsp. salmonicida A449

Site:
position = -192
score = 4.17699
sequence = AGCGTACAGCTGTAGCAA

Site:
position = -179
score = 4.46757
sequence = AGCAAACACCTGTTCACA

Gene: ASA_2157: Long-chain fatty acid transport protein
 
Tolumonas auensis DSM 9187
Long-chain fatty acid transport protein
 
CRON 3.
pfaA
 
Psychromonas ingrahamii 37

Gene: Ping_1684: omega-3 polyunsaturated fatty acid synthase subunit, PfaA
 
Psychromonas sp. CNPT3

Gene: PCNPT3_08215: omega-3 polyunsaturated fatty acid synthase subunit, PfaA
*
Moritella sp. PE36

Site:
position = -101
score = 5.83017
sequence = AGAGTACACTTGTACGCT

Gene: PE36_12337: omega-3 polyunsaturated fatty acid synthase subunit, PfaA
 
Aeromonas hydrophila subsp. hydrophila ATCC 7966
 
Aeromonas salmonicida subsp. salmonicida A449
 
Tolumonas auensis DSM 9187
omega-3 polyunsaturated fatty acid synthase subunit, PfaA
pfaB
 
Psychromonas ingrahamii 37

Gene: Ping_1685: omega-3 polyunsaturated fatty acid synthase subunit, PfaB
 
Psychromonas sp. CNPT3

Gene: PCNPT3_08210: omega-3 polyunsaturated fatty acid synthase subunit, PfaB
 
Moritella sp. PE36

Gene: PE36_12332: omega-3 polyunsaturated fatty acid synthase subunit, PfaB
 
Aeromonas hydrophila subsp. hydrophila ATCC 7966
 
Aeromonas salmonicida subsp. salmonicida A449
 
Tolumonas auensis DSM 9187
omega-3 polyunsaturated fatty acid synthase subunit, PfaB
 
CRON 4.
desC
 
Psychromonas ingrahamii 37
 
Psychromonas sp. CNPT3
*
Moritella sp. PE36

Site:
position = -45
score = 5.93194
sequence = AGTGTACACGTGTAAGCT

Gene: PE36_07177: Flavodoxin reductases (ferredoxin-NADPH reductases) family 1
 
Aeromonas hydrophila subsp. hydrophila ATCC 7966
 
Aeromonas salmonicida subsp. salmonicida A449
 
Tolumonas auensis DSM 9187
Flavodoxin reductases (ferredoxin-NADPH reductases) family 1
desB
 
Psychromonas ingrahamii 37
 
Psychromonas sp. CNPT3
 
Moritella sp. PE36

Gene: PE36_07172: Acyl-CoA delta-9-desaturase, DesB
 
Aeromonas hydrophila subsp. hydrophila ATCC 7966
 
Aeromonas salmonicida subsp. salmonicida A449
 
Tolumonas auensis DSM 9187
Acyl-CoA delta-9-desaturase, DesB
 
CRON 5.
plsC
 
Psychromonas ingrahamii 37

Gene: Ping_0863: 1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51)
 
Psychromonas sp. CNPT3

Gene: PCNPT3_04132: 1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51)
*
Moritella sp. PE36

Site:
position = -64
score = 4.95324
sequence = AGCTAACGCTTGTACACT

Gene: PE36_00604: 1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51)
*
Aeromonas hydrophila subsp. hydrophila ATCC 7966

Site:
position = -65
score = 5.1183
sequence = GGCGAACGCTTGTTCGCT

Gene: AHA_3740: 1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51)
*
Aeromonas salmonicida subsp. salmonicida A449

Site:
position = -65
score = 5.1183
sequence = GGCGAACGCTTGTTCGCT

Gene: ASA_0546: 1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51)
 
Tolumonas auensis DSM 9187

Gene: Tola_0464: 1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51)
1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51)
 
CRON 6.
lcfH
 
Psychromonas ingrahamii 37
 
Psychromonas sp. CNPT3
*
Moritella sp. PE36

Site:
position = -56
score = 5.56282
sequence = GGCTTACAAGTGTAAGCC

Gene: PE36_22265: putative long-chain-fatty-acid--CoA ligase
*
Aeromonas hydrophila subsp. hydrophila ATCC 7966

Site:
position = -98
score = 5.79867
sequence = GGCGAACACTTGTAAGCT

Site:
position = -33
score = 4.53801
sequence = GGCGTACAACTGTTACTT

Gene: AHA_0722: putative long-chain-fatty-acid--CoA ligase
*
Aeromonas salmonicida subsp. salmonicida A449

Site:
position = -33
score = 4.53801
sequence = GGCGTACAACTGTTACTT

Site:
position = -97
score = 6.12767
sequence = AGCGAACACTTGTAAGCT

Gene: ASA_0719: putative long-chain-fatty-acid--CoA ligase
 
Tolumonas auensis DSM 9187
putative long-chain-fatty-acid--CoA ligase
 
CRON 7.
fabA
 
Psychromonas ingrahamii 37

Gene: Ping_1982: 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase (EC 4.2.1.60)
 
Psychromonas sp. CNPT3

Gene: PCNPT3_07260: 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase (EC 4.2.1.60)
*
Moritella sp. PE36

Site:
position = -49
score = 5.96505
sequence = GGCGTACAGATGTACGCT

Gene: PE36_11777: 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase (EC 4.2.1.60)
*
Aeromonas hydrophila subsp. hydrophila ATCC 7966

Site:
position = -57
score = 6.13971
sequence = AGCGAACAACTGTACGCT

Gene: AHA_2280: 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase (EC 4.2.1.60)
*
Aeromonas salmonicida subsp. salmonicida A449

Site:
position = -57
score = 5.86866
sequence = AGCGCACAAGTGTACGCT

Gene: ASA_2000: 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase (EC 4.2.1.60)
 
Tolumonas auensis DSM 9187

Gene: Tola_1422: 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase (EC 4.2.1.60)
3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase (EC 4.2.1.60)
 
CRON 8.
hyIII
 
Psychromonas ingrahamii 37

Gene: Ping_1130: COG1272: Predicted membrane protein hemolysin III homolog
 
Psychromonas sp. CNPT3
*
Moritella sp. PE36

Site:
position = -51
score = 6.41738
sequence = AGCGTACACTTGTACGCT

Gene: PE36_03571: COG1272: Predicted membrane protein hemolysin III homolog
*
Aeromonas hydrophila subsp. hydrophila ATCC 7966

Site:
position = -64
score = 5.54045
sequence = AGCTAACACTTGTACTCT

Gene: AHA_3493: COG1272: Predicted membrane protein hemolysin III homolog
*
Aeromonas salmonicida subsp. salmonicida A449

Site:
position = -64
score = 5.54045
sequence = AGCTAACACTTGTACTCT

Gene: ASA_0824: COG1272: Predicted membrane protein hemolysin III homolog
 
Tolumonas auensis DSM 9187
COG1272: Predicted membrane protein hemolysin III homolog
 
CRON 9.
OLE1
*
Psychromonas ingrahamii 37

Site:
position = -56
score = 5.37784
sequence = GGTGTACATCTGTACGCT

Gene: Ping_1494: Fatty acid desaturase (EC 1.14.19.1)
 
Psychromonas sp. CNPT3
*
Moritella sp. PE36

Site:
position = -60
score = 5.77038
sequence = AGCTTACACTTGTGCGCT

Gene: PE36_01362: Fatty acid desaturase (EC 1.14.19.1)
*
Aeromonas hydrophila subsp. hydrophila ATCC 7966

Site:
position = -35
score = 5.3758
sequence = GGCGCACAGCTGTTCGCT

Gene: AHA_0366: Fatty acid desaturase (EC 1.14.19.1)
*
Aeromonas salmonicida subsp. salmonicida A449

Site:
position = -35
score = 5.3758
sequence = GGCGCACAGCTGTTCGCT

Gene: ASA_3966: Fatty acid desaturase (EC 1.14.19.1)
 
Tolumonas auensis DSM 9187
Fatty acid desaturase (EC 1.14.19.1)
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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