Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog Cobalamin - Desulfovibrionales

Properties
Regulator type: RNA regulatory element
Name: Cobalamin
RFAM: RF00174
Regulation mode:
Biological process: Cobalamin biosynthesis
Effector: Adenosylcobalamin
Phylum: Proteobacteria/delta
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Desulfovibrio vulgaris Hildenborough 8 3
Desulfovibrio vulgaris str. Miyazaki F 7 2
Desulfovibrio desulfuricans G20 8 3
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 6 3
Desulfovibrio piger ATCC 29098 7 3
Desulfovibrio salexigens DSM 2638 10 4
Desulfovibrio magneticus RS-1 7 2
Lawsonia intracellularis PHE/MN1-00
Desulfomicrobium baculatum DSM 4028 12 2
Desulfohalobium retbaense DSM 5692 2 1
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
cbiK
*
Desulfovibrio vulgaris Hildenborough

Site:
position = -318
score = 92.98
sequence = GCCTATGCCGCACGA...

Gene: DVU0650: Sirohydrochlorin cobaltochelatase CbiK (EC 4.99.1.3)
*
Desulfovibrio vulgaris str. Miyazaki F

Site:
position = -382
score = 95.02
sequence = CTATCCATGAACCTT...

Gene: DvMF_1496: Sirohydrochlorin cobaltochelatase CbiK (EC 4.99.1.3)
*
Desulfovibrio desulfuricans G20

Site:
position = -103
score = 99.22
sequence = TAACCCGAATCGATT...

Gene: Dde_3103: Sirohydrochlorin cobaltochelatase CbiK (EC 4.99.1.3)
 
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774
 
Desulfovibrio piger ATCC 29098
*
Desulfovibrio salexigens DSM 2638

Site:
position = -306
score = 76.17
sequence = ATATTTAGCCTTTGC...

Gene: Desal_2307: Sirohydrochlorin cobaltochelatase CbiK (EC 4.99.1.3)
*
Desulfovibrio magneticus RS-1

Site:
position = -291
score = 83.92
sequence = CTCCCCGGAAATCGA...

Gene: DMR_15530: Sirohydrochlorin cobaltochelatase CbiK (EC 4.99.1.3)
 
Lawsonia intracellularis PHE/MN1-00
*
Desulfomicrobium baculatum DSM 4028

Site:
position = -266
score = 92.2
sequence = GCGTCTTTTCCACTT...

Gene: Dbac_1710: Sirohydrochlorin cobaltochelatase CbiK (EC 4.99.1.3)
 
Desulfohalobium retbaense DSM 5692
Sirohydrochlorin cobaltochelatase CbiK (EC 4.99.1.3)
btuC
 
Desulfovibrio vulgaris Hildenborough

Gene: DVU0649: Vitamin B12 ABC transporter, permease component BtuC
 
Desulfovibrio vulgaris str. Miyazaki F

Gene: DvMF_1497: Vitamin B12 ABC transporter, permease component BtuC
 
Desulfovibrio desulfuricans G20

Gene: Dde_3104: Vitamin B12 ABC transporter, permease component BtuC
*
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774

Site:
position = -548
score = 77.38
sequence = AAAGTATGCGCGGCA...

Gene: Ddes_0796: Vitamin B12 ABC transporter, permease component BtuC
*
Desulfovibrio piger ATCC 29098

Site:
position = -106
score = 83.07
sequence = TAGAGTAGCGCGTCC...

Gene: DESPIG_00414: Vitamin B12 ABC transporter, permease component BtuC
 
Desulfovibrio salexigens DSM 2638

Gene: Desal_2306: Vitamin B12 ABC transporter, permease component BtuC
 
Desulfovibrio magneticus RS-1

Gene: DMR_15520: Vitamin B12 ABC transporter, permease component BtuC
 
Lawsonia intracellularis PHE/MN1-00
 
Desulfomicrobium baculatum DSM 4028

Gene: Dbac_1711: Vitamin B12 ABC transporter, permease component BtuC
 
Desulfohalobium retbaense DSM 5692
Vitamin B12 ABC transporter, permease component BtuC
btuD
 
Desulfovibrio vulgaris Hildenborough

Gene: DVU0648: Vitamin B12 ABC transporter, ATPase component BtuD
 
Desulfovibrio vulgaris str. Miyazaki F

Gene: DvMF_1498: Vitamin B12 ABC transporter, ATPase component BtuD
 
Desulfovibrio desulfuricans G20

Gene: Dde_3105: Vitamin B12 ABC transporter, ATPase component BtuD
 
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774

Gene: Ddes_0797: Vitamin B12 ABC transporter, ATPase component BtuD
 
Desulfovibrio piger ATCC 29098

Gene: DESPIG_00415: Vitamin B12 ABC transporter, ATPase component BtuD
 
Desulfovibrio salexigens DSM 2638

Gene: Desal_2305: Vitamin B12 ABC transporter, ATPase component BtuD
 
Desulfovibrio magneticus RS-1

Gene: DMR_15510: Vitamin B12 ABC transporter, ATPase component BtuD
 
Lawsonia intracellularis PHE/MN1-00
 
Desulfomicrobium baculatum DSM 4028

Gene: Dbac_1712: Vitamin B12 ABC transporter, ATPase component BtuD
 
Desulfohalobium retbaense DSM 5692
Vitamin B12 ABC transporter, ATPase component BtuD
btuF
 
Desulfovibrio vulgaris Hildenborough

Gene: DVU0647: Vitamin B12 ABC transporter, B12-binding component BtuF
 
Desulfovibrio vulgaris str. Miyazaki F

Gene: DvMF_1499: Vitamin B12 ABC transporter, B12-binding component BtuF
 
Desulfovibrio desulfuricans G20

Gene: Dde_3106: Vitamin B12 ABC transporter, B12-binding component BtuF
 
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774

Gene: Ddes_0798: Vitamin B12 ABC transporter, B12-binding component BtuF
 
Desulfovibrio piger ATCC 29098

Gene: DESPIG_00416: Vitamin B12 ABC transporter, B12-binding component BtuF
 
Desulfovibrio salexigens DSM 2638

Gene: Desal_2304: Vitamin B12 ABC transporter, B12-binding component BtuF
 
Desulfovibrio magneticus RS-1

Gene: DMR_15500: Vitamin B12 ABC transporter, B12-binding component BtuF
 
Lawsonia intracellularis PHE/MN1-00
 
Desulfomicrobium baculatum DSM 4028

Gene: Dbac_1713: Vitamin B12 ABC transporter, B12-binding component BtuF
 
Desulfohalobium retbaense DSM 5692

Gene: Dret_0029: Vitamin B12 ABC transporter, B12-binding component BtuF
Vitamin B12 ABC transporter, B12-binding component BtuF
cbiL
 
Desulfovibrio vulgaris Hildenborough

Gene: DVU0646: Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130)
 
Desulfovibrio vulgaris str. Miyazaki F

Gene: DvMF_1500: Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130)
 
Desulfovibrio desulfuricans G20

Gene: Dde_3107: Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130)
 
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774

Gene: Ddes_0799: Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130)
 
Desulfovibrio piger ATCC 29098

Gene: DESPIG_00417: Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130)
 
Desulfovibrio salexigens DSM 2638

Gene: Desal_2303: Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130)
 
Desulfovibrio magneticus RS-1

Gene: DMR_15490: Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130)
 
Lawsonia intracellularis PHE/MN1-00
 
Desulfomicrobium baculatum DSM 4028

Gene: Dbac_1714: Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130)
 
Desulfohalobium retbaense DSM 5692
Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130)
cbiA
 
Desulfovibrio vulgaris Hildenborough

Gene: DVU3086: Cobyrinic acid A,C-diamide synthase
 
Desulfovibrio vulgaris str. Miyazaki F

Gene: DvMF_2254: Cobyrinic acid A,C-diamide synthase
 
Desulfovibrio desulfuricans G20

Gene: Dde_0343: Cobyrinic acid A,C-diamide synthase
 
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774
 
Desulfovibrio piger ATCC 29098
 
Desulfovibrio salexigens DSM 2638

Gene: Desal_0269: Cobyrinic acid A,C-diamide synthase
 
Desulfovibrio magneticus RS-1

Gene: DMR_11850: Cobyrinic acid A,C-diamide synthase
 
Lawsonia intracellularis PHE/MN1-00
 
Desulfomicrobium baculatum DSM 4028

Gene: Dbac_1715: Cobyrinic acid A,C-diamide synthase
 
Desulfohalobium retbaense DSM 5692
Cobyrinic acid A,C-diamide synthase
cbiD
 
Desulfovibrio vulgaris Hildenborough

Gene: DVU2750: Cobalt-precorrin-6 synthase, anaerobic
 
Desulfovibrio vulgaris str. Miyazaki F

Gene: DvMF_1174: Cobalt-precorrin-6 synthase, anaerobic
 
Desulfovibrio desulfuricans G20

Gene: Dde_0804: Cobalt-precorrin-6 synthase, anaerobic
 
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774

Gene: Ddes_1978: Cobalt-precorrin-6 synthase, anaerobic
 
Desulfovibrio piger ATCC 29098

Gene: DESPIG_00350: Cobalt-precorrin-6 synthase, anaerobic
 
Desulfovibrio salexigens DSM 2638

Gene: Desal_0267: Cobalt-precorrin-6 synthase, anaerobic
 
Desulfovibrio magneticus RS-1

Gene: DMR_11840: Cobalt-precorrin-6 synthase, anaerobic
 
Lawsonia intracellularis PHE/MN1-00
 
Desulfomicrobium baculatum DSM 4028

Gene: Dbac_1716: Cobalt-precorrin-6 synthase, anaerobic
 
Desulfohalobium retbaense DSM 5692
Cobalt-precorrin-6 synthase, anaerobic
cbiET
 
Desulfovibrio vulgaris Hildenborough

Gene: DVU2749: Cobalt-precorrin-6y C5-methyltransferase (EC 2.1.1.-) / Cobalt-precorrin-6y C15-methyltransferase [decarboxylating] (EC 2.1.1.-)
 
Desulfovibrio vulgaris str. Miyazaki F

Gene: DvMF_1175: Cobalt-precorrin-6y C5-methyltransferase (EC 2.1.1.-) / Cobalt-precorrin-6y C15-methyltransferase [decarboxylating] (EC 2.1.1.-)
 
Desulfovibrio desulfuricans G20

Gene: Dde_0803: Cobalt-precorrin-6y C5-methyltransferase (EC 2.1.1.-) / Cobalt-precorrin-6y C15-methyltransferase [decarboxylating] (EC 2.1.1.-)
 
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774

Gene: Ddes_1979: Cobalt-precorrin-6y C5-methyltransferase (EC 2.1.1.-) / Cobalt-precorrin-6y C15-methyltransferase [decarboxylating] (EC 2.1.1.-)
 
Desulfovibrio piger ATCC 29098

Gene: DESPIG_02409: Cobalt-precorrin-6y C5-methyltransferase (EC 2.1.1.-) / Cobalt-precorrin-6y C15-methyltransferase [decarboxylating] (EC 2.1.1.-)
 
Desulfovibrio salexigens DSM 2638

Gene: Desal_0265: Cobalt-precorrin-6y C5-methyltransferase (EC 2.1.1.-) / Cobalt-precorrin-6y C15-methyltransferase [decarboxylating] (EC 2.1.1.-)
 
Desulfovibrio magneticus RS-1

Gene: DMR_11880: Cobalt-precorrin-6y C5-methyltransferase (EC 2.1.1.-) / Cobalt-precorrin-6y C15-methyltransferase [decarboxylating] (EC 2.1.1.-)
 
Lawsonia intracellularis PHE/MN1-00
 
Desulfomicrobium baculatum DSM 4028

Gene: Dbac_1717: Cobalt-precorrin-6y C5-methyltransferase (EC 2.1.1.-) / Cobalt-precorrin-6y C15-methyltransferase [decarboxylating] (EC 2.1.1.-)
 
Desulfohalobium retbaense DSM 5692
Cobalt-precorrin-6y C5-methyltransferase (EC 2.1.1.-) / Cobalt-precorrin-6y C15-methyltransferase [decarboxylating] (EC 2.1.1.-)
cbiG
 
Desulfovibrio vulgaris Hildenborough

Gene: DVU3169: Cobalamin biosynthesis protein CbiG
 
Desulfovibrio vulgaris str. Miyazaki F

Gene: DvMF_2501: Cobalamin biosynthesis protein CbiG
 
Desulfovibrio desulfuricans G20

Gene: Dde_3181: Cobalamin biosynthesis protein CbiG
 
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774

Gene: Ddes_2015: Cobalamin biosynthesis protein CbiG
 
Desulfovibrio piger ATCC 29098

Gene: DESPIG_02930: Cobalamin biosynthesis protein CbiG
 
Desulfovibrio salexigens DSM 2638

Gene: Desal_0754: Cobalamin biosynthesis protein CbiG
 
Desulfovibrio magneticus RS-1

Gene: DMR_02540: Cobalamin biosynthesis protein CbiG
 
Lawsonia intracellularis PHE/MN1-00
 
Desulfomicrobium baculatum DSM 4028

Gene: Dbac_1718: Cobalamin biosynthesis protein CbiG
 
Desulfohalobium retbaense DSM 5692
Cobalamin biosynthesis protein CbiG
cbiH
 
Desulfovibrio vulgaris Hildenborough

Gene: DVU3170: Cobalt-precorrin-3b C17-methyltransferase
 
Desulfovibrio vulgaris str. Miyazaki F

Gene: DvMF_2500: Cobalt-precorrin-3b C17-methyltransferase
 
Desulfovibrio desulfuricans G20
 
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774

Gene: Ddes_2014: Cobalt-precorrin-3b C17-methyltransferase
 
Desulfovibrio piger ATCC 29098
 
Desulfovibrio salexigens DSM 2638

Gene: Desal_0755: Cobalt-precorrin-3b C17-methyltransferase
 
Desulfovibrio magneticus RS-1

Gene: DMR_02550: Cobalt-precorrin-3b C17-methyltransferase
 
Lawsonia intracellularis PHE/MN1-00
 
Desulfomicrobium baculatum DSM 4028

Gene: Dbac_1719: Cobalt-precorrin-3b C17-methyltransferase
 
Desulfohalobium retbaense DSM 5692
Cobalt-precorrin-3b C17-methyltransferase
btuB
 
Desulfovibrio vulgaris Hildenborough
 
Desulfovibrio vulgaris str. Miyazaki F
 
Desulfovibrio desulfuricans G20
 
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774
 
Desulfovibrio piger ATCC 29098
 
Desulfovibrio salexigens DSM 2638
 
Desulfovibrio magneticus RS-1
 
Lawsonia intracellularis PHE/MN1-00
 
Desulfomicrobium baculatum DSM 4028
*
Desulfohalobium retbaense DSM 5692

Site:
position = -302
score = 108.92
sequence = GTTGTATCCTGCCCC...

Gene: Dret_0028: Outer membrane vitamin B12 receptor BtuB
Outer membrane vitamin B12 receptor BtuB
 
CRON 2.
nrdD
 
Desulfovibrio vulgaris Hildenborough

Gene: DVU0299: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
 
Desulfovibrio vulgaris str. Miyazaki F

Gene: DvMF_1819: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
 
Desulfovibrio desulfuricans G20

Gene: Dde_0277: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
 
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774
*
Desulfovibrio piger ATCC 29098

Site:
position = -330
score = 71.63
sequence = CATCTTGAGCGGGCA...

Gene: DESPIG_00246: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
 
Desulfovibrio salexigens DSM 2638

Gene: Desal_2955: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
*2
Desulfovibrio magneticus RS-1

Gene: DMR_44720: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)

Site:
position = -388
score = 79.47
sequence = AAGAGGGAATCCGGT...

Gene: DMR_44320: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
 
Lawsonia intracellularis PHE/MN1-00
 
Desulfomicrobium baculatum DSM 4028

Gene: Dbac_3397: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
 
Desulfohalobium retbaense DSM 5692

Gene: Dret_0068: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
DESPIG_00247
 
Desulfovibrio vulgaris Hildenborough
 
Desulfovibrio vulgaris str. Miyazaki F
 
Desulfovibrio desulfuricans G20
 
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774
 
Desulfovibrio piger ATCC 29098

Gene: DESPIG_00247: Hypothetical protein
 
Desulfovibrio salexigens DSM 2638
 
Desulfovibrio magneticus RS-1
 
Lawsonia intracellularis PHE/MN1-00
 
Desulfomicrobium baculatum DSM 4028
 
Desulfohalobium retbaense DSM 5692
Hypothetical protein
nrdG
 
Desulfovibrio vulgaris Hildenborough

Gene: DVU0300: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)
 
Desulfovibrio vulgaris str. Miyazaki F

Gene: DvMF_1818: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)
 
Desulfovibrio desulfuricans G20

Gene: Dde_0278: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)
 
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774

Gene: Ddes_1073: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)
 
Desulfovibrio piger ATCC 29098

Gene: DESPIG_00248: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)
 
Desulfovibrio salexigens DSM 2638

Gene: Desal_2954: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)
 2
Desulfovibrio magneticus RS-1

Gene: DMR_44710: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)

Gene: DMR_44330: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)
 
Lawsonia intracellularis PHE/MN1-00
*
Desulfomicrobium baculatum DSM 4028

Site:
position = -236
score = 55.65
sequence = GTCCTAATACTTAAC...

Gene: Dbac_3396: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)
 
Desulfohalobium retbaense DSM 5692

Gene: Dret_0069: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)
Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)
 
CRON 3.
nrdD
*
Desulfovibrio vulgaris Hildenborough

Site:
position = -348
score = 56.34
sequence = TTCCCCGTCTGCTAT...

Gene: DVU2947: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
*
Desulfovibrio vulgaris str. Miyazaki F

Site:
position = -372
score = 26.93
sequence = CAAAGGGAATCCGGT...

Gene: DvMF_1473: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
*
Desulfovibrio desulfuricans G20

Site:
position = -265
score = 15.74
sequence = AACCGGTGTAATTCC...

Gene: Dde_3016: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
 
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774
 
Desulfovibrio piger ATCC 29098
*
Desulfovibrio salexigens DSM 2638

Site:
position = -420
score = 40.74
sequence = ACTTCAGGAATCCGT...

Gene: Desal_3514: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
 
Desulfovibrio magneticus RS-1
 
Lawsonia intracellularis PHE/MN1-00
 
Desulfomicrobium baculatum DSM 4028
 
Desulfohalobium retbaense DSM 5692
Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
DVU2946
 
Desulfovibrio vulgaris Hildenborough

Gene: DVU2946: Hypothetical protein
 
Desulfovibrio vulgaris str. Miyazaki F

Gene: DvMF_1472: Hypothetical protein
 
Desulfovibrio desulfuricans G20

Gene: Dde_3015: Hypothetical protein
 
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774
 
Desulfovibrio piger ATCC 29098
 
Desulfovibrio salexigens DSM 2638

Gene: Desal_3513: Hypothetical protein
 
Desulfovibrio magneticus RS-1
 
Lawsonia intracellularis PHE/MN1-00
 
Desulfomicrobium baculatum DSM 4028
 
Desulfohalobium retbaense DSM 5692
Hypothetical protein
 
CRON 4.
metE
*
Desulfovibrio vulgaris Hildenborough

Site:
position = -322
score = 58.99
sequence = TATCAATATGGAGTG...

Gene: DVU3371: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14)
 
Desulfovibrio vulgaris str. Miyazaki F

Gene: DvMF_2035: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14)
*
Desulfovibrio desulfuricans G20

Site:
position = -297
score = 79.25
sequence = TTGAATATTGATGAA...

Gene: Dde_2328: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14)
 
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774
 
Desulfovibrio piger ATCC 29098
*
Desulfovibrio salexigens DSM 2638

Site:
position = -265
score = 58.56
sequence = TATATTGAATTTGAT...

Gene: Desal_0813: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14)
 
Desulfovibrio magneticus RS-1
 
Lawsonia intracellularis PHE/MN1-00
 
Desulfomicrobium baculatum DSM 4028
 
Desulfohalobium retbaense DSM 5692
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14)
metF
 
Desulfovibrio vulgaris Hildenborough

Gene: DVU0997: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)
 
Desulfovibrio vulgaris str. Miyazaki F

Gene: DvMF_3034: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)
 
Desulfovibrio desulfuricans G20

Gene: Dde_2525: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)
 
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774

Gene: Ddes_2008: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)
 
Desulfovibrio piger ATCC 29098

Gene: DESPIG_02490: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)
 
Desulfovibrio salexigens DSM 2638

Gene: Desal_0814: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)
 
Desulfovibrio magneticus RS-1
 
Lawsonia intracellularis PHE/MN1-00
 
Desulfomicrobium baculatum DSM 4028
 
Desulfohalobium retbaense DSM 5692
5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)
 
CRON 5.
cbiK2
 
Desulfovibrio vulgaris Hildenborough
 
Desulfovibrio vulgaris str. Miyazaki F
 
Desulfovibrio desulfuricans G20
*
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774

Site:
position = -255
score = 55.61
sequence = TGACATTTACCGCGC...

Gene: Ddes_2334: Sirohydrochlorin cobaltochelatase CbiK (EC 4.99.1.3)
*
Desulfovibrio piger ATCC 29098

Site:
position = -220
score = 47.83
sequence = CCCAAACCGTTTCTG...

Gene: DESPIG_01756: Sirohydrochlorin cobaltochelatase CbiK (EC 4.99.1.3)
 
Desulfovibrio salexigens DSM 2638
 
Desulfovibrio magneticus RS-1
 
Lawsonia intracellularis PHE/MN1-00
 
Desulfomicrobium baculatum DSM 4028
 
Desulfohalobium retbaense DSM 5692
Sirohydrochlorin cobaltochelatase CbiK (EC 4.99.1.3)
 
CRON 6.
Ddes_1071
 
Desulfovibrio vulgaris Hildenborough
 
Desulfovibrio vulgaris str. Miyazaki F
 
Desulfovibrio desulfuricans G20
*
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774

Site:
position = -138
score = 102.72
sequence = ATTTTCTAGACATTG...

Gene: Ddes_1071: Hypothetical protein
 
Desulfovibrio piger ATCC 29098
 
Desulfovibrio salexigens DSM 2638
 
Desulfovibrio magneticus RS-1
 
Lawsonia intracellularis PHE/MN1-00
 
Desulfomicrobium baculatum DSM 4028
 
Desulfohalobium retbaense DSM 5692
Hypothetical protein
 
CRON 7.
nrdA
 
Desulfovibrio vulgaris Hildenborough
 
Desulfovibrio vulgaris str. Miyazaki F
 
Desulfovibrio desulfuricans G20
 
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774
 
Desulfovibrio piger ATCC 29098
*
Desulfovibrio salexigens DSM 2638

Site:
position = -393
score = 38.6
sequence = TCGTTGTGTTTTCAC...

Gene: Desal_0826: Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)
 
Desulfovibrio magneticus RS-1
 
Lawsonia intracellularis PHE/MN1-00
 
Desulfomicrobium baculatum DSM 4028
 
Desulfohalobium retbaense DSM 5692
Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD