Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog Cobalamin - Bacillales

Properties
Regulator type: RNA regulatory element
Name: Cobalamin
RFAM: RF00174
Regulation mode:
Biological process: Cobalamin biosynthesis
Effector: Adenosylcobalamin
Phylum: Firmicutes
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Bacillus subtilis subsp. subtilis str. 168 4 1
Bacillus amyloliquefaciens FZB42
Bacillus pumilus SAFR-032 1 1
Bacillus licheniformis DSM 13 1 1
Anoxybacillus flavithermus WK1 35 3
Geobacillus kaustophilus HTA426 34 3
Bacillus cereus ATCC 14579 1 1
Bacillus halodurans C-125 16 5
Bacillus clausii KSM-K16 1 1
Oceanobacillus iheyensis HTE831
Paenibacillus sp. JDR-2 14 2
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
metE
 
Bacillus subtilis subsp. subtilis str. 168

Gene: BSU13180: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14)
 
Bacillus amyloliquefaciens FZB42

Gene: RBAM_013040: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14)
*
Bacillus pumilus SAFR-032

Site:
position = -345
score = 113.89
sequence = AATTCATAGTTTGAG...

Gene: BPUM_1215: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14)
*
Bacillus licheniformis DSM 13

Site:
position = -338
score = 113.96
sequence = ATTTCATCGCCGGGA...

Gene: BLi01422: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14)
 
Anoxybacillus flavithermus WK1
 
Geobacillus kaustophilus HTA426
*
Bacillus cereus ATCC 14579

Site:
position = -315
score = 114.86
sequence = CTTTCAAAAGGAAAA...

Gene: BC4003: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14)
*
Bacillus halodurans C-125

Site:
position = -340
score = 123.55
sequence = ATTTCATCGTTTGGG...

Gene: BH0438: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14)
*
Bacillus clausii KSM-K16

Site:
position = -302
score = 60.74
sequence = TTTTATAGATGCAAC...

Gene: ABC1449: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14)
 
Oceanobacillus iheyensis HTE831
 
Paenibacillus sp. JDR-2

Gene: Pjdr2_2828: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14)
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14)
 
CRON 2.
nrdA
 
Bacillus subtilis subsp. subtilis str. 168
 
Bacillus amyloliquefaciens FZB42
 
Bacillus pumilus SAFR-032
 
Bacillus licheniformis DSM 13
*
Anoxybacillus flavithermus WK1

Site:
position = -316
score = 121.41
sequence = ATTGAAACCAACAAG...

Gene: Aflv_0393: Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)
*
Geobacillus kaustophilus HTA426

Site:
position = -249
score = 123.93
sequence = TCGTTGCGCCAAGCA...

Gene: GK0911: Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)
 
Bacillus cereus ATCC 14579
*
Bacillus halodurans C-125

Site:
position = -351
score = 119.7
sequence = GTGTTTGTGGACGGT...

Gene: BH0501: Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)
 
Bacillus clausii KSM-K16
 
Oceanobacillus iheyensis HTE831

Gene: OB3089: Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)
 
Paenibacillus sp. JDR-2
Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)
Aflv_2124
 
Bacillus subtilis subsp. subtilis str. 168
 
Bacillus amyloliquefaciens FZB42
 
Bacillus pumilus SAFR-032
 
Bacillus licheniformis DSM 13
 
Anoxybacillus flavithermus WK1

Gene: Aflv_0392: transposase
 
Geobacillus kaustophilus HTA426
 
Bacillus cereus ATCC 14579
 
Bacillus halodurans C-125
 
Bacillus clausii KSM-K16
 
Oceanobacillus iheyensis HTE831
 
Paenibacillus sp. JDR-2
transposase
Aflv_0391
 
Bacillus subtilis subsp. subtilis str. 168
 
Bacillus amyloliquefaciens FZB42
 
Bacillus pumilus SAFR-032
 
Bacillus licheniformis DSM 13
 
Anoxybacillus flavithermus WK1

Gene: Aflv_0391: Flavodoxin
 
Geobacillus kaustophilus HTA426
 
Bacillus cereus ATCC 14579
 
Bacillus halodurans C-125
 
Bacillus clausii KSM-K16
 
Oceanobacillus iheyensis HTE831

Gene: OB3088: Flavodoxin
 
Paenibacillus sp. JDR-2
Flavodoxin
nrdB
 
Bacillus subtilis subsp. subtilis str. 168
 
Bacillus amyloliquefaciens FZB42
 
Bacillus pumilus SAFR-032
 
Bacillus licheniformis DSM 13
 
Anoxybacillus flavithermus WK1

Gene: Aflv_0390: Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1)
 
Geobacillus kaustophilus HTA426

Gene: GK0912: Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1)
 
Bacillus cereus ATCC 14579
 
Bacillus halodurans C-125

Gene: BH0502: Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1)
 
Bacillus clausii KSM-K16
 
Oceanobacillus iheyensis HTE831

Gene: OB3087: Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1)
 
Paenibacillus sp. JDR-2
Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1)
 
CRON 3.
achX
 
Bacillus subtilis subsp. subtilis str. 168
 
Bacillus amyloliquefaciens FZB42
 
Bacillus pumilus SAFR-032
 
Bacillus licheniformis DSM 13
 
Anoxybacillus flavithermus WK1
 
Geobacillus kaustophilus HTA426
 
Bacillus cereus ATCC 14579
*
Bacillus halodurans C-125

Site:
position = -384
score = 114.33
sequence = AGCACGCTCAAGCAT...

Gene: BH0798: Predicted thioesterase
 
Bacillus clausii KSM-K16
 
Oceanobacillus iheyensis HTE831
 
Paenibacillus sp. JDR-2
Predicted thioesterase
 
CRON 4.
Pjdr2_2684
 
Bacillus subtilis subsp. subtilis str. 168
 
Bacillus amyloliquefaciens FZB42
 
Bacillus pumilus SAFR-032
 
Bacillus licheniformis DSM 13
 
Anoxybacillus flavithermus WK1
 
Geobacillus kaustophilus HTA426
 
Bacillus cereus ATCC 14579
 
Bacillus halodurans C-125
 
Bacillus clausii KSM-K16
 
Oceanobacillus iheyensis HTE831
*
Paenibacillus sp. JDR-2

Site:
position = -365
score = 102.52
sequence = ATACGAGATAAGTAT...

Gene: Pjdr2_2684: S-layer domain protein
S-layer domain protein
Pjdr2_2685
 
Bacillus subtilis subsp. subtilis str. 168
 
Bacillus amyloliquefaciens FZB42
 
Bacillus pumilus SAFR-032
 
Bacillus licheniformis DSM 13
 
Anoxybacillus flavithermus WK1
 
Geobacillus kaustophilus HTA426
 
Bacillus cereus ATCC 14579
 
Bacillus halodurans C-125
 
Bacillus clausii KSM-K16
 
Oceanobacillus iheyensis HTE831
 
Paenibacillus sp. JDR-2

Gene: Pjdr2_2685: Hypothetical protein
Hypothetical protein
Pjdr2_2686
 
Bacillus subtilis subsp. subtilis str. 168
 
Bacillus amyloliquefaciens FZB42
 
Bacillus pumilus SAFR-032
 
Bacillus licheniformis DSM 13
 
Anoxybacillus flavithermus WK1
 
Geobacillus kaustophilus HTA426
 
Bacillus cereus ATCC 14579
 
Bacillus halodurans C-125
 
Bacillus clausii KSM-K16
 
Oceanobacillus iheyensis HTE831
 
Paenibacillus sp. JDR-2

Gene: Pjdr2_2686: Transmembrane component of B12-regulated ECF transporter
Transmembrane component of B12-regulated ECF transporter
Pjdr2_2687
 
Bacillus subtilis subsp. subtilis str. 168
 
Bacillus amyloliquefaciens FZB42
 
Bacillus pumilus SAFR-032
 
Bacillus licheniformis DSM 13
 
Anoxybacillus flavithermus WK1
 
Geobacillus kaustophilus HTA426
 
Bacillus cereus ATCC 14579
 
Bacillus halodurans C-125
 
Bacillus clausii KSM-K16
 
Oceanobacillus iheyensis HTE831
 
Paenibacillus sp. JDR-2

Gene: Pjdr2_2687: Duplicated ATPase component B12-regulated ECF transporter
Duplicated ATPase component B12-regulated ECF transporter
Pjdr2_2688
 
Bacillus subtilis subsp. subtilis str. 168
 
Bacillus amyloliquefaciens FZB42
 
Bacillus pumilus SAFR-032
 
Bacillus licheniformis DSM 13
 
Anoxybacillus flavithermus WK1
 
Geobacillus kaustophilus HTA426
 
Bacillus cereus ATCC 14579
 
Bacillus halodurans C-125
 
Bacillus clausii KSM-K16
 
Oceanobacillus iheyensis HTE831
 
Paenibacillus sp. JDR-2

Gene: Pjdr2_2688: Substrate-specific component of B12-regulated ECF transporter
Substrate-specific component of B12-regulated ECF transporter
 
CRON 5.
cbiW
 
Bacillus subtilis subsp. subtilis str. 168
 
Bacillus amyloliquefaciens FZB42
 
Bacillus pumilus SAFR-032
 
Bacillus licheniformis DSM 13
*
Anoxybacillus flavithermus WK1

Site:
position = -317
score = 111.83
sequence = ATATACGATCAGCAA...

Gene: Aflv_2185: Putative 2Fe-2S ferredoxin CbiW involved in B12 biosynthesis
*
Geobacillus kaustophilus HTA426

Site:
position = -378
score = 117.92
sequence = TAGGCGAGAAACAAA...

Gene: GK1810: Putative 2Fe-2S ferredoxin CbiW involved in B12 biosynthesis
 
Bacillus cereus ATCC 14579
 
Bacillus halodurans C-125
 
Bacillus clausii KSM-K16
 
Oceanobacillus iheyensis HTE831
 
Paenibacillus sp. JDR-2
Putative 2Fe-2S ferredoxin CbiW involved in B12 biosynthesis
cbiM
 
Bacillus subtilis subsp. subtilis str. 168
 
Bacillus amyloliquefaciens FZB42
 
Bacillus pumilus SAFR-032
 
Bacillus licheniformis DSM 13
 
Anoxybacillus flavithermus WK1

Gene: Aflv_2184: Substrate-specific component CbiM of cobalt ECF transporter
 
Geobacillus kaustophilus HTA426

Gene: GK1809: Substrate-specific component CbiM of cobalt ECF transporter
 
Bacillus cereus ATCC 14579
 
Bacillus halodurans C-125
 
Bacillus clausii KSM-K16
 
Oceanobacillus iheyensis HTE831
 
Paenibacillus sp. JDR-2
Substrate-specific component CbiM of cobalt ECF transporter
cbiN
 
Bacillus subtilis subsp. subtilis str. 168
 
Bacillus amyloliquefaciens FZB42
 
Bacillus pumilus SAFR-032
 
Bacillus licheniformis DSM 13
 
Anoxybacillus flavithermus WK1

Gene: Aflv_2183: Additional substrate-specific component CbiN of cobalt ECF transporter
 
Geobacillus kaustophilus HTA426

Gene: GK1808: Additional substrate-specific component CbiN of cobalt ECF transporter
 
Bacillus cereus ATCC 14579
 
Bacillus halodurans C-125
 
Bacillus clausii KSM-K16
 
Oceanobacillus iheyensis HTE831
 
Paenibacillus sp. JDR-2
Additional substrate-specific component CbiN of cobalt ECF transporter
cbiQ
 
Bacillus subtilis subsp. subtilis str. 168
 
Bacillus amyloliquefaciens FZB42
 
Bacillus pumilus SAFR-032
 
Bacillus licheniformis DSM 13
 
Anoxybacillus flavithermus WK1

Gene: Aflv_2182: Transmembrane component CbiQ of energizing module of cobalt ECF transporter
 
Geobacillus kaustophilus HTA426

Gene: GK1807: Transmembrane component CbiQ of energizing module of cobalt ECF transporter
 
Bacillus cereus ATCC 14579
 
Bacillus halodurans C-125
 
Bacillus clausii KSM-K16
 
Oceanobacillus iheyensis HTE831
 
Paenibacillus sp. JDR-2
Transmembrane component CbiQ of energizing module of cobalt ECF transporter
cbiO
 
Bacillus subtilis subsp. subtilis str. 168
 
Bacillus amyloliquefaciens FZB42
 
Bacillus pumilus SAFR-032
 
Bacillus licheniformis DSM 13
 
Anoxybacillus flavithermus WK1

Gene: Aflv_2181: ATPase component CbiO of energizing module of cobalt ECF transporter
 
Geobacillus kaustophilus HTA426

Gene: GK1806: ATPase component CbiO of energizing module of cobalt ECF transporter
 
Bacillus cereus ATCC 14579
 
Bacillus halodurans C-125
 
Bacillus clausii KSM-K16
 
Oceanobacillus iheyensis HTE831
 
Paenibacillus sp. JDR-2
ATPase component CbiO of energizing module of cobalt ECF transporter
cbiH
 
Bacillus subtilis subsp. subtilis str. 168
 
Bacillus amyloliquefaciens FZB42
 
Bacillus pumilus SAFR-032
 
Bacillus licheniformis DSM 13
 
Anoxybacillus flavithermus WK1

Gene: Aflv_2180: Cobalt-precorrin-3b C17-methyltransferase
 
Geobacillus kaustophilus HTA426

Gene: GK1805: Cobalt-precorrin-3b C17-methyltransferase
 
Bacillus cereus ATCC 14579
 
Bacillus halodurans C-125
 
Bacillus clausii KSM-K16
 
Oceanobacillus iheyensis HTE831
 
Paenibacillus sp. JDR-2
Cobalt-precorrin-3b C17-methyltransferase
cbiX
 
Bacillus subtilis subsp. subtilis str. 168
 
Bacillus amyloliquefaciens FZB42
 
Bacillus pumilus SAFR-032
 
Bacillus licheniformis DSM 13
 
Anoxybacillus flavithermus WK1

Gene: Aflv_2179: Sirohydrochlorin cobaltochelatase (EC 4.99.1.3)
 
Geobacillus kaustophilus HTA426

Gene: GK1804: Sirohydrochlorin cobaltochelatase (EC 4.99.1.3)
 
Bacillus cereus ATCC 14579
 
Bacillus halodurans C-125
 
Bacillus clausii KSM-K16
 
Oceanobacillus iheyensis HTE831
 
Paenibacillus sp. JDR-2
Sirohydrochlorin cobaltochelatase (EC 4.99.1.3)
cbiJ
 
Bacillus subtilis subsp. subtilis str. 168
 
Bacillus amyloliquefaciens FZB42
 
Bacillus pumilus SAFR-032
 
Bacillus licheniformis DSM 13
 
Anoxybacillus flavithermus WK1

Gene: Aflv_2178: Cobalt-precorrin-6x reductase (EC 1.3.1.54)
 
Geobacillus kaustophilus HTA426

Gene: GK1803: Cobalt-precorrin-6x reductase (EC 1.3.1.54)
 
Bacillus cereus ATCC 14579
 
Bacillus halodurans C-125
 
Bacillus clausii KSM-K16
 
Oceanobacillus iheyensis HTE831
 
Paenibacillus sp. JDR-2
Cobalt-precorrin-6x reductase (EC 1.3.1.54)
cbiC
 
Bacillus subtilis subsp. subtilis str. 168
 
Bacillus amyloliquefaciens FZB42
 
Bacillus pumilus SAFR-032
 
Bacillus licheniformis DSM 13
 
Anoxybacillus flavithermus WK1

Gene: Aflv_2177: Cobalt-precorrin-8x methylmutase (EC 5.4.1.2)
 
Geobacillus kaustophilus HTA426

Gene: GK1802: Cobalt-precorrin-8x methylmutase (EC 5.4.1.2)
 
Bacillus cereus ATCC 14579
 
Bacillus halodurans C-125
 
Bacillus clausii KSM-K16
 
Oceanobacillus iheyensis HTE831
 
Paenibacillus sp. JDR-2
Cobalt-precorrin-8x methylmutase (EC 5.4.1.2)
cbiD
 
Bacillus subtilis subsp. subtilis str. 168
 
Bacillus amyloliquefaciens FZB42
 
Bacillus pumilus SAFR-032
 
Bacillus licheniformis DSM 13
 
Anoxybacillus flavithermus WK1

Gene: Aflv_2176: Cobalt-precorrin-6 synthase, anaerobic (EC 2.1.1.-)
 
Geobacillus kaustophilus HTA426

Gene: GK1801: Cobalt-precorrin-6 synthase, anaerobic (EC 2.1.1.-)
 
Bacillus cereus ATCC 14579
 
Bacillus halodurans C-125
 
Bacillus clausii KSM-K16
 
Oceanobacillus iheyensis HTE831
 
Paenibacillus sp. JDR-2
Cobalt-precorrin-6 synthase, anaerobic (EC 2.1.1.-)
cbiET
 
Bacillus subtilis subsp. subtilis str. 168
 
Bacillus amyloliquefaciens FZB42
 
Bacillus pumilus SAFR-032
 
Bacillus licheniformis DSM 13
 
Anoxybacillus flavithermus WK1

Gene: Aflv_2175: Cobalt-precorrin-6y C5-methyltransferase (EC 2.1.1.-) / Cobalt-precorrin-6y C15-methyltransferase [decarboxylating] (EC 2.1.1.-)
 
Geobacillus kaustophilus HTA426

Gene: GK1800: Cobalt-precorrin-6y C5-methyltransferase (EC 2.1.1.-) / Cobalt-precorrin-6y C15-methyltransferase [decarboxylating] (EC 2.1.1.-)
 
Bacillus cereus ATCC 14579
 
Bacillus halodurans C-125
 
Bacillus clausii KSM-K16
 
Oceanobacillus iheyensis HTE831
 
Paenibacillus sp. JDR-2
Cobalt-precorrin-6y C5-methyltransferase (EC 2.1.1.-) / Cobalt-precorrin-6y C15-methyltransferase [decarboxylating] (EC 2.1.1.-)
cbiL
 
Bacillus subtilis subsp. subtilis str. 168
 
Bacillus amyloliquefaciens FZB42
 
Bacillus pumilus SAFR-032
 
Bacillus licheniformis DSM 13
 
Anoxybacillus flavithermus WK1

Gene: Aflv_2174: Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130)
 
Geobacillus kaustophilus HTA426

Gene: GK1799: Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130)
 
Bacillus cereus ATCC 14579
 
Bacillus halodurans C-125
 
Bacillus clausii KSM-K16
 
Oceanobacillus iheyensis HTE831
 
Paenibacillus sp. JDR-2
Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130)
cbiF
 
Bacillus subtilis subsp. subtilis str. 168
 
Bacillus amyloliquefaciens FZB42
 
Bacillus pumilus SAFR-032
 
Bacillus licheniformis DSM 13
 
Anoxybacillus flavithermus WK1

Gene: Aflv_2173: Cobalt-precorrin-4 C11-methyltransferase (EC 2.1.1.133)
 
Geobacillus kaustophilus HTA426

Gene: GK1798: Cobalt-precorrin-4 C11-methyltransferase (EC 2.1.1.133)
 
Bacillus cereus ATCC 14579
 
Bacillus halodurans C-125
 
Bacillus clausii KSM-K16
 
Oceanobacillus iheyensis HTE831
 
Paenibacillus sp. JDR-2
Cobalt-precorrin-4 C11-methyltransferase (EC 2.1.1.133)
cbiG
 
Bacillus subtilis subsp. subtilis str. 168
 
Bacillus amyloliquefaciens FZB42
 
Bacillus pumilus SAFR-032
 
Bacillus licheniformis DSM 13
 
Anoxybacillus flavithermus WK1

Gene: Aflv_2172: Cobalamin biosynthesis protein CbiG
 
Geobacillus kaustophilus HTA426

Gene: GK1797: Cobalamin biosynthesis protein CbiG
 
Bacillus cereus ATCC 14579
 
Bacillus halodurans C-125
 
Bacillus clausii KSM-K16
 
Oceanobacillus iheyensis HTE831
 
Paenibacillus sp. JDR-2
Cobalamin biosynthesis protein CbiG
cbiA
 
Bacillus subtilis subsp. subtilis str. 168
 
Bacillus amyloliquefaciens FZB42
 
Bacillus pumilus SAFR-032
 
Bacillus licheniformis DSM 13
 
Anoxybacillus flavithermus WK1

Gene: Aflv_2171: Cobyrinic acid A,C-diamide synthase
 
Geobacillus kaustophilus HTA426

Gene: GK1796: Cobyrinic acid A,C-diamide synthase
 
Bacillus cereus ATCC 14579
 
Bacillus halodurans C-125

Gene: BH1898: Cobyrinic acid A,C-diamide synthase
 
Bacillus clausii KSM-K16
 
Oceanobacillus iheyensis HTE831
 
Paenibacillus sp. JDR-2
Cobyrinic acid A,C-diamide synthase
cbiP
 
Bacillus subtilis subsp. subtilis str. 168
 
Bacillus amyloliquefaciens FZB42
 
Bacillus pumilus SAFR-032
 
Bacillus licheniformis DSM 13
 
Anoxybacillus flavithermus WK1

Gene: Aflv_2170: Cobyric acid synthase
 
Geobacillus kaustophilus HTA426

Gene: GK1795: Cobyric acid synthase
 
Bacillus cereus ATCC 14579
 
Bacillus halodurans C-125

Gene: BH1591: Cobyric acid synthase
 
Bacillus clausii KSM-K16
 
Oceanobacillus iheyensis HTE831
 
Paenibacillus sp. JDR-2

Gene: Pjdr2_3625: Cobyric acid synthase
Cobyric acid synthase
GK1794
 
Bacillus subtilis subsp. subtilis str. 168
 
Bacillus amyloliquefaciens FZB42
 
Bacillus pumilus SAFR-032
 
Bacillus licheniformis DSM 13
 
Anoxybacillus flavithermus WK1
 
Geobacillus kaustophilus HTA426

Gene: GK1794: Transposase
 
Bacillus cereus ATCC 14579
 
Bacillus halodurans C-125
 
Bacillus clausii KSM-K16
 
Oceanobacillus iheyensis HTE831
 
Paenibacillus sp. JDR-2
Transposase
cobT
 
Bacillus subtilis subsp. subtilis str. 168
 
Bacillus amyloliquefaciens FZB42
 
Bacillus pumilus SAFR-032
 
Bacillus licheniformis DSM 13
 
Anoxybacillus flavithermus WK1

Gene: Aflv_2169: Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21)
 
Geobacillus kaustophilus HTA426

Gene: GK1793: Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21)
 
Bacillus cereus ATCC 14579
*
Bacillus halodurans C-125

Site:
position = -253
score = 89.81
sequence = CTTTAATAGGCTTCT...

Gene: BH0284: Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21)
 
Bacillus clausii KSM-K16
 
Oceanobacillus iheyensis HTE831
 
Paenibacillus sp. JDR-2

Gene: Pjdr2_3352: Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21)
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21)
cobA
 
Bacillus subtilis subsp. subtilis str. 168
 
Bacillus amyloliquefaciens FZB42
 
Bacillus pumilus SAFR-032
 
Bacillus licheniformis DSM 13
 
Anoxybacillus flavithermus WK1

Gene: Aflv_2168: Uroporphyrinogen-III methyltransferase (EC 2.1.1.107)
 
Geobacillus kaustophilus HTA426

Gene: GK1792: Uroporphyrinogen-III methyltransferase (EC 2.1.1.107)
 
Bacillus cereus ATCC 14579
 
Bacillus halodurans C-125
 
Bacillus clausii KSM-K16
 
Oceanobacillus iheyensis HTE831
 
Paenibacillus sp. JDR-2
Uroporphyrinogen-III methyltransferase (EC 2.1.1.107)
btuR
 
Bacillus subtilis subsp. subtilis str. 168
 
Bacillus amyloliquefaciens FZB42
 
Bacillus pumilus SAFR-032
 
Bacillus licheniformis DSM 13
 
Anoxybacillus flavithermus WK1

Gene: Aflv_2167: Cob(I)alamin adenosyltransferase (EC 2.5.1.17)
 
Geobacillus kaustophilus HTA426

Gene: GK1791: Cob(I)alamin adenosyltransferase (EC 2.5.1.17)
 
Bacillus cereus ATCC 14579
 
Bacillus halodurans C-125
 
Bacillus clausii KSM-K16
 
Oceanobacillus iheyensis HTE831
 
Paenibacillus sp. JDR-2
Cob(I)alamin adenosyltransferase (EC 2.5.1.17)
btuF
*
Bacillus subtilis subsp. subtilis str. 168

Site:
position = -245
score = 78.37
sequence = CGGATACGAATGTCA...

Gene: BSU33180: Vitamin B12 ABC transporter, B12-binding component BtuF
 
Bacillus amyloliquefaciens FZB42

Gene: RBAM_030310: Vitamin B12 ABC transporter, B12-binding component BtuF
 
Bacillus pumilus SAFR-032

Gene: BPUM_2981: Vitamin B12 ABC transporter, B12-binding component BtuF
 
Bacillus licheniformis DSM 13

Gene: BLi03506: Vitamin B12 ABC transporter, B12-binding component BtuF
*
Anoxybacillus flavithermus WK1

Site:
position = -396
score = 131.85
sequence = TATGTCCGTTGCAAA...

Gene: Aflv_1041: Vitamin B12 ABC transporter, B12-binding component BtuF
*
Geobacillus kaustophilus HTA426

Site:
position = -341
score = 122.23
sequence = CTAAATCAACTCGCA...

Gene: GK2266: Vitamin B12 ABC transporter, B12-binding component BtuF
 
Bacillus cereus ATCC 14579
*
Bacillus halodurans C-125

Site:
position = -407
score = 118.66
sequence = CGTATATCGCGCTGA...

Gene: BH1585: Vitamin B12 ABC transporter, B12-binding component BtuF
 
Bacillus clausii KSM-K16

Gene: ABC2981: Vitamin B12 ABC transporter, B12-binding component BtuF
 
Oceanobacillus iheyensis HTE831
*
Paenibacillus sp. JDR-2

Site:
position = -357
score = 95.13
sequence = ACGAATAAATCATGG...

Gene: Pjdr2_3355: Vitamin B12 ABC transporter, B12-binding component BtuF
Vitamin B12 ABC transporter, B12-binding component BtuF
btuC
 
Bacillus subtilis subsp. subtilis str. 168

Gene: BSU33170: Vitamin B12 ABC transporter, permease component BtuC
 
Bacillus amyloliquefaciens FZB42

Gene: RBAM_030300: Vitamin B12 ABC transporter, permease component BtuC
 
Bacillus pumilus SAFR-032

Gene: BPUM_2980: Vitamin B12 ABC transporter, permease component BtuC
 
Bacillus licheniformis DSM 13

Gene: BLi03505: Vitamin B12 ABC transporter, permease component BtuC
 
Anoxybacillus flavithermus WK1

Gene: Aflv_1042: Vitamin B12 ABC transporter, permease component BtuC
 
Geobacillus kaustophilus HTA426

Gene: GK2265: Vitamin B12 ABC transporter, permease component BtuC
 
Bacillus cereus ATCC 14579
 
Bacillus halodurans C-125

Gene: BH1586: Vitamin B12 ABC transporter, permease component BtuC
 
Bacillus clausii KSM-K16

Gene: ABC1837: Vitamin B12 ABC transporter, permease component BtuC
 
Oceanobacillus iheyensis HTE831
 
Paenibacillus sp. JDR-2

Gene: Pjdr2_3354: Vitamin B12 ABC transporter, permease component BtuC
Vitamin B12 ABC transporter, permease component BtuC
btuD-cbiZ
 
Bacillus subtilis subsp. subtilis str. 168

Gene: BSU33160: Vitamin B12 ABC transporter, ATPase component BtuD / Adenosylcobinamide amidohydrolase (EC 3.5.1.90)
 
Bacillus amyloliquefaciens FZB42

Gene: RBAM_030290: Vitamin B12 ABC transporter, ATPase component BtuD / Adenosylcobinamide amidohydrolase (EC 3.5.1.90)
 
Bacillus pumilus SAFR-032

Gene: BPUM_2979: Vitamin B12 ABC transporter, ATPase component BtuD / Adenosylcobinamide amidohydrolase (EC 3.5.1.90)
 
Bacillus licheniformis DSM 13

Gene: BLi03504: Vitamin B12 ABC transporter, ATPase component BtuD / Adenosylcobinamide amidohydrolase (EC 3.5.1.90)
 
Anoxybacillus flavithermus WK1

Gene: Aflv_1043: Vitamin B12 ABC transporter, ATPase component BtuD / Adenosylcobinamide amidohydrolase (EC 3.5.1.90)
 
Geobacillus kaustophilus HTA426

Gene: GK2264: Vitamin B12 ABC transporter, ATPase component BtuD / Adenosylcobinamide amidohydrolase (EC 3.5.1.90)
 
Bacillus cereus ATCC 14579
 
Bacillus halodurans C-125

Gene: BH1587: Vitamin B12 ABC transporter, ATPase component BtuD / Adenosylcobinamide amidohydrolase (EC 3.5.1.90)
 
Bacillus clausii KSM-K16
 
Oceanobacillus iheyensis HTE831
 
Paenibacillus sp. JDR-2
Vitamin B12 ABC transporter, ATPase component BtuD / Adenosylcobinamide amidohydrolase (EC 3.5.1.90)
cbiB
 
Bacillus subtilis subsp. subtilis str. 168
 
Bacillus amyloliquefaciens FZB42
 
Bacillus pumilus SAFR-032
 
Bacillus licheniformis DSM 13
 
Anoxybacillus flavithermus WK1

Gene: Aflv_1044: Adenosylcobinamide-phosphate synthase
 
Geobacillus kaustophilus HTA426

Gene: GK2263: Adenosylcobinamide-phosphate synthase
 
Bacillus cereus ATCC 14579
 
Bacillus halodurans C-125

Gene: BH1588: Adenosylcobinamide-phosphate synthase
 
Bacillus clausii KSM-K16
 
Oceanobacillus iheyensis HTE831
 
Paenibacillus sp. JDR-2

Gene: Pjdr2_3350: Adenosylcobinamide-phosphate synthase
Adenosylcobinamide-phosphate synthase
cobD
 
Bacillus subtilis subsp. subtilis str. 168
 
Bacillus amyloliquefaciens FZB42
 
Bacillus pumilus SAFR-032
 
Bacillus licheniformis DSM 13
 
Anoxybacillus flavithermus WK1

Gene: Aflv_1045: L-threonine 3-O-phosphate decarboxylase (EC 4.1.1.81)
 
Geobacillus kaustophilus HTA426

Gene: GK2262: L-threonine 3-O-phosphate decarboxylase (EC 4.1.1.81)
 
Bacillus cereus ATCC 14579
 
Bacillus halodurans C-125

Gene: BH1589: L-threonine 3-O-phosphate decarboxylase (EC 4.1.1.81)
 
Bacillus clausii KSM-K16
 
Oceanobacillus iheyensis HTE831
 
Paenibacillus sp. JDR-2

Gene: Pjdr2_3348: L-threonine 3-O-phosphate decarboxylase (EC 4.1.1.81)
L-threonine 3-O-phosphate decarboxylase (EC 4.1.1.81)
cobU
 
Bacillus subtilis subsp. subtilis str. 168
 
Bacillus amyloliquefaciens FZB42
 
Bacillus pumilus SAFR-032
 
Bacillus licheniformis DSM 13
 
Anoxybacillus flavithermus WK1

Gene: Aflv_1046: Adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62)
 
Geobacillus kaustophilus HTA426

Gene: GK2261: Adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62)
 
Bacillus cereus ATCC 14579
 
Bacillus halodurans C-125

Gene: BH1590: Adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62)
 
Bacillus clausii KSM-K16
 
Oceanobacillus iheyensis HTE831
 
Paenibacillus sp. JDR-2

Gene: Pjdr2_3351: Adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62)
Adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62)
cobS
 
Bacillus subtilis subsp. subtilis str. 168
 
Bacillus amyloliquefaciens FZB42
 
Bacillus pumilus SAFR-032
 
Bacillus licheniformis DSM 13
 
Anoxybacillus flavithermus WK1

Gene: Aflv_1047: Cobalamin synthase
 
Geobacillus kaustophilus HTA426

Gene: GK2260: Cobalamin synthase
 
Bacillus cereus ATCC 14579
 
Bacillus halodurans C-125

Gene: BH1592: Cobalamin synthase
 
Bacillus clausii KSM-K16
 
Oceanobacillus iheyensis HTE831
 
Paenibacillus sp. JDR-2

Gene: Pjdr2_3349: Cobalamin synthase
Cobalamin synthase
cobC
 
Bacillus subtilis subsp. subtilis str. 168
 
Bacillus amyloliquefaciens FZB42
 
Bacillus pumilus SAFR-032
 
Bacillus licheniformis DSM 13
 
Anoxybacillus flavithermus WK1

Gene: Aflv_1048: Alpha-ribazole-5'-phosphate phosphatase (EC 3.1.3.73)
 
Geobacillus kaustophilus HTA426

Gene: GK2259: Alpha-ribazole-5'-phosphate phosphatase (EC 3.1.3.73)
 
Bacillus cereus ATCC 14579
 
Bacillus halodurans C-125

Gene: BH1593: Alpha-ribazole-5'-phosphate phosphatase (EC 3.1.3.73)
 
Bacillus clausii KSM-K16
 
Oceanobacillus iheyensis HTE831
 
Paenibacillus sp. JDR-2
Alpha-ribazole-5'-phosphate phosphatase (EC 3.1.3.73)
cobU2
 
Bacillus subtilis subsp. subtilis str. 168
 
Bacillus amyloliquefaciens FZB42
 
Bacillus pumilus SAFR-032
 
Bacillus licheniformis DSM 13
 
Anoxybacillus flavithermus WK1

Gene: Aflv_1049: Adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62)
 
Geobacillus kaustophilus HTA426

Gene: GK2258: Adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62)
 
Bacillus cereus ATCC 14579
 
Bacillus halodurans C-125

Gene: BH1594: Adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62)
 
Bacillus clausii KSM-K16
 
Oceanobacillus iheyensis HTE831
 
Paenibacillus sp. JDR-2
Adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62)
pduO
 
Bacillus subtilis subsp. subtilis str. 168

Gene: BSU33150: Cob(I)alamin adenosyltransferase PduO (EC 2.5.1.17)
 
Bacillus amyloliquefaciens FZB42

Gene: RBAM_030280: Cob(I)alamin adenosyltransferase PduO (EC 2.5.1.17)
 
Bacillus pumilus SAFR-032

Gene: BPUM_2969: Cob(I)alamin adenosyltransferase PduO (EC 2.5.1.17)
 
Bacillus licheniformis DSM 13

Gene: BLi03499: Cob(I)alamin adenosyltransferase PduO (EC 2.5.1.17)
 
Anoxybacillus flavithermus WK1

Gene: Aflv_1050: Cob(I)alamin adenosyltransferase PduO (EC 2.5.1.17)
 
Geobacillus kaustophilus HTA426

Gene: GK2257: Cob(I)alamin adenosyltransferase PduO (EC 2.5.1.17)
 
Bacillus cereus ATCC 14579

Gene: BC1479: Cob(I)alamin adenosyltransferase PduO (EC 2.5.1.17)
 
Bacillus halodurans C-125

Gene: BH1595: Cob(I)alamin adenosyltransferase PduO (EC 2.5.1.17)
 
Bacillus clausii KSM-K16

Gene: ABC1839: Cob(I)alamin adenosyltransferase PduO (EC 2.5.1.17)
 
Oceanobacillus iheyensis HTE831
 
Paenibacillus sp. JDR-2

Gene: Pjdr2_1405: Cob(I)alamin adenosyltransferase PduO (EC 2.5.1.17)
Cob(I)alamin adenosyltransferase PduO (EC 2.5.1.17)
cblT
 
Bacillus subtilis subsp. subtilis str. 168
 
Bacillus amyloliquefaciens FZB42
 
Bacillus pumilus SAFR-032
 
Bacillus licheniformis DSM 13
 
Anoxybacillus flavithermus WK1

Gene: Aflv_1051: Substrate-specific component CblT of predicted B12-regulated ECF transporter for dimethylbenzimidazole
 
Geobacillus kaustophilus HTA426

Gene: GK2256: Substrate-specific component CblT of predicted B12-regulated ECF transporter for dimethylbenzimidazole
 
Bacillus cereus ATCC 14579
 
Bacillus halodurans C-125
 
Bacillus clausii KSM-K16
 
Oceanobacillus iheyensis HTE831
 
Paenibacillus sp. JDR-2
Substrate-specific component CblT of predicted B12-regulated ECF transporter for dimethylbenzimidazole
cblS
 
Bacillus subtilis subsp. subtilis str. 168
 
Bacillus amyloliquefaciens FZB42
 
Bacillus pumilus SAFR-032
 
Bacillus licheniformis DSM 13
 
Anoxybacillus flavithermus WK1

Gene: Aflv_1052: Predicted alpha-ribazole-5-phosphate synthase CblS for cobalamin biosynthesis
 
Geobacillus kaustophilus HTA426

Gene: GK2255: Predicted alpha-ribazole-5-phosphate synthase CblS for cobalamin biosynthesis
 
Bacillus cereus ATCC 14579
 
Bacillus halodurans C-125

Gene: BH0853: Predicted alpha-ribazole-5-phosphate synthase CblS for cobalamin biosynthesis
 
Bacillus clausii KSM-K16
 
Oceanobacillus iheyensis HTE831
 
Paenibacillus sp. JDR-2
Predicted alpha-ribazole-5-phosphate synthase CblS for cobalamin biosynthesis
btuD
 
Bacillus subtilis subsp. subtilis str. 168
 
Bacillus amyloliquefaciens FZB42
 
Bacillus pumilus SAFR-032
 
Bacillus licheniformis DSM 13
 
Anoxybacillus flavithermus WK1
 
Geobacillus kaustophilus HTA426
 
Bacillus cereus ATCC 14579
 
Bacillus halodurans C-125
 
Bacillus clausii KSM-K16

Gene: ABC1838: Vitamin B12 ABC transporter, ATPase component BtuD
 
Oceanobacillus iheyensis HTE831
 
Paenibacillus sp. JDR-2

Gene: Pjdr2_3353: Vitamin B12 ABC transporter, ATPase component BtuD
Vitamin B12 ABC transporter, ATPase component BtuD
cbiZ
 
Bacillus subtilis subsp. subtilis str. 168
 
Bacillus amyloliquefaciens FZB42
 
Bacillus pumilus SAFR-032
 
Bacillus licheniformis DSM 13
 
Anoxybacillus flavithermus WK1
 
Geobacillus kaustophilus HTA426
 
Bacillus cereus ATCC 14579
 
Bacillus halodurans C-125
 
Bacillus clausii KSM-K16
 
Oceanobacillus iheyensis HTE831
 
Paenibacillus sp. JDR-2

Gene: Pjdr2_3347: Adenosylcobinamide amidohydrolase (EC 3.5.1.90)
Adenosylcobinamide amidohydrolase (EC 3.5.1.90)
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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