Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog FMN - Ralstonia

Properties
Regulator type: RNA regulatory element
Name: FMN
RFAM: RF00050
Regulation mode:
Biological process: Riboflavin biosynthesis
Effector: Flavin mononucleotide
Phylum: Proteobacteria
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Cupriavidus taiwanensis 1 1
Ralstonia eutropha H16 1 1
Ralstonia eutropha JMP134 1 1
Ralstonia metallidurans CH34 1 1
Ralstonia pickettii 12J 1 1
Ralstonia solanacearum GMI1000 1 1
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
ribB
*
Cupriavidus taiwanensis

Site:
position = -326
score = 98.71
sequence = TACGTCTTCAGGGCG...

Gene: RALTA_B1130: 3,4-dihydroxy-2-butanone 4-phosphate synthase
*
Ralstonia eutropha H16

Site:
position = -309
score = 96.03
sequence = TACGTCTTCAGGGCG...

Gene: H16_B1223: 3,4-dihydroxy-2-butanone 4-phosphate synthase
*
Ralstonia eutropha JMP134

Site:
position = -336
score = 100.11
sequence = TACGTCTTCAGGGCG...

Gene: Reut_B4029: 3,4-dihydroxy-2-butanone 4-phosphate synthase
*
Ralstonia metallidurans CH34

Site:
position = -126
score = 98.93
sequence = GCGGAATTCGCATGA...

Gene: Rmet_4758: 3,4-dihydroxy-2-butanone 4-phosphate synthase
*
Ralstonia pickettii 12J

Site:
position = -281
score = 108.32
sequence = TACGTCTTCAGGGCG...

Gene: Rpic_4191: 3,4-dihydroxy-2-butanone 4-phosphate synthase
*
Ralstonia solanacearum GMI1000

Site:
position = -170
score = 96.08
sequence = GCGGAACGATGCGCG...

Gene: RSp1191: 3,4-dihydroxy-2-butanone 4-phosphate synthase
3,4-dihydroxy-2-butanone 4-phosphate synthase
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD