Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog FMN - Desulfovibrionales

Properties
Regulator type: RNA regulatory element
Name: FMN
RFAM: RF00050
Regulation mode:
Biological process: Riboflavin biosynthesis
Effector: Flavin mononucleotide
Phylum: Proteobacteria/Delta
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Desulfohalobium retbaense DSM 5692
Desulfomicrobium baculatum DSM 4028 1 1
Desulfovibrio desulfuricans G20 1 1
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 1 1
Desulfovibrio magneticus RS-1 1 1
Desulfovibrio piger ATCC 29098 1 1
Desulfovibrio salexigens DSM 2638 1 1
Desulfovibrio vulgaris Hildenborough 1 1
Desulfovibrio vulgaris str. Miyazaki F 1 1
Lawsonia intracellularis PHE/MN1-00
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
ribB
 
Desulfohalobium retbaense DSM 5692
*
Desulfomicrobium baculatum DSM 4028

Site:
position = -71
score = 98.6
sequence = GGCCGCCGTTCACGG...

Gene: Dbac_0862: 3,4-dihydroxy-2-butanone 4-phosphate synthase
*
Desulfovibrio desulfuricans G20

Site:
position = -293
score = 100.11
sequence = CTTATTCTCAGGGCG...

Gene: Dde_1050: 3,4-dihydroxy-2-butanone 4-phosphate synthase
*
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774

Site:
position = -156
score = 102.08
sequence = TTGCAGCCGCCAATG...

Gene: Ddes_2290: 3,4-dihydroxy-2-butanone 4-phosphate synthase
*
Desulfovibrio magneticus RS-1

Site:
position = -267
score = 83.54
sequence = GTTGTCCTCAGGGCG...

Gene: DMR_35270: 3,4-dihydroxy-2-butanone 4-phosphate synthase
*
Desulfovibrio piger ATCC 29098

Site:
position = -271
score = 94.99
sequence = TCCATTCTCAGGGCG...

Gene: DESPIG_01856: 3,4-dihydroxy-2-butanone 4-phosphate synthase
*
Desulfovibrio salexigens DSM 2638

Site:
position = -107
score = 124.77
sequence = GACAGTCTTACCGCA...

Gene: Desal_2097: 3,4-dihydroxy-2-butanone 4-phosphate synthase
*
Desulfovibrio vulgaris Hildenborough

Site:
position = -96
score = 105.13
sequence = GGCGGTGGCATCCGT...

Gene: DVU1775: 3,4-dihydroxy-2-butanone 4-phosphate synthase
*
Desulfovibrio vulgaris str. Miyazaki F

Site:
position = -450
score = 87.96
sequence = CGAATCCTCAGGGCG...

Gene: DvMF_2680: 3,4-dihydroxy-2-butanone 4-phosphate synthase
 
Lawsonia intracellularis PHE/MN1-00
3,4-dihydroxy-2-butanone 4-phosphate synthase
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD