Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog PerR - Cyanobacteria

Properties
Regulator type: Transcription factor
Regulator family: FUR
Regulation mode: repressor
Biological process: Peroxide stress response
Effector: Manganese ion, (Mn2+)
Phylum: Cyanobacteria
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 20 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Trichodesmium erythraeum IMS101
Cyanothece sp. ATCC 51142 3 3
Cyanothece sp. PCC 8801
Nostoc sp. PCC 7120
Microcystis aeruginosa NIES-843
Synechocystis sp. PCC 6803 2 2
Synechococcus sp. PCC 7002 3 2
Cyanothece sp. PCC 7425 3 3
Prochlorococcus marinus str. MIT 9313
Thermosynechococcus elongatus BP-1
Synechococcus elongatus PCC 7942 4 3
Synechococcus sp. WH 8102
Synechococcus sp. JA-3-3Ab
Gloeobacter violaceus PCC 7421 2 2
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
rub
 
Trichodesmium erythraeum IMS101
 
Cyanothece sp. ATCC 51142
 
Cyanothece sp. PCC 8801

Gene: PCC8801_1511: Predicted rubrerythrin
 
Nostoc sp. PCC 7120

Gene: alr1174: Predicted rubrerythrin
 
Microcystis aeruginosa NIES-843
 
Synechocystis sp. PCC 6803
 
Synechococcus sp. PCC 7002
 
Cyanothece sp. PCC 7425
 
Prochlorococcus marinus str. MIT 9313

Gene: PMT2166: Predicted rubrerythrin
 
Thermosynechococcus elongatus BP-1
*
Synechococcus elongatus PCC 7942

Site:
position = -45
score = 5.151
sequence = TAAGACTTATTCTTA

Gene: Synpcc7942_1649: Predicted rubrerythrin
 
Synechococcus sp. WH 8102

Gene: SYNW2369: Predicted rubrerythrin
 
Synechococcus sp. JA-3-3Ab
*
Gloeobacter violaceus PCC 7421

Site:
position = -62
score = 4.41876
sequence = ATAGAACGATTCTTA

Site:
position = -45
score = 4.63516
sequence = TAAGACTTGTTCTAG

Gene: glr3734: Predicted rubrerythrin
Predicted rubrerythrin
 
CRON 2.
isiA
 
Trichodesmium erythraeum IMS101

Gene: Tery_1667: Iron stress-induced chlorophyll-binding protein
 
Cyanothece sp. ATCC 51142

Gene: cce_1785: Iron stress-induced chlorophyll-binding protein
 
Cyanothece sp. PCC 8801
 
Nostoc sp. PCC 7120

Gene: all4001: Iron stress-induced chlorophyll-binding protein
 
Microcystis aeruginosa NIES-843
 
Synechocystis sp. PCC 6803

Gene: sll0247: Iron stress-induced chlorophyll-binding protein
*
Synechococcus sp. PCC 7002

Site:
position = -273
score = 4.89173
sequence = TGAGAATAATTGTAG

Gene: SYNPCC7002_A1292: Iron stress-induced chlorophyll-binding protein
*
Cyanothece sp. PCC 7425

Site:
position = -95
score = 4.85737
sequence = TGAGAAAGATTCTGA

Gene: Cyan7425_2434: Iron stress-induced chlorophyll-binding protein
 
Prochlorococcus marinus str. MIT 9313
 
Thermosynechococcus elongatus BP-1

Gene: null: Iron stress-induced chlorophyll-binding protein
*
Synechococcus elongatus PCC 7942

Site:
position = -43
score = 5.22286
sequence = TGAGAATTATTGTAA

Gene: Synpcc7942_1542: Iron stress-induced chlorophyll-binding protein
 
Synechococcus sp. WH 8102
 
Synechococcus sp. JA-3-3Ab
 
Gloeobacter violaceus PCC 7421
Iron stress-induced chlorophyll-binding protein
isiB
 
Trichodesmium erythraeum IMS101

Gene: Tery_1666: Flavodoxin
*
Cyanothece sp. ATCC 51142

Site:
position = -64
score = 5.70454
sequence = TGAGAATTATTCTAA

Gene: cce_3031: Flavodoxin
 
Cyanothece sp. PCC 8801
 
Nostoc sp. PCC 7120

Gene: alr2405: Flavodoxin
 
Microcystis aeruginosa NIES-843
 
Synechocystis sp. PCC 6803

Gene: sll0248: Flavodoxin
 
Synechococcus sp. PCC 7002

Gene: SYNPCC7002_A1291: Flavodoxin
 
Cyanothece sp. PCC 7425
 
Prochlorococcus marinus str. MIT 9313
 
Thermosynechococcus elongatus BP-1
 
Synechococcus elongatus PCC 7942

Gene: Synpcc7942_1541: Flavodoxin
 
Synechococcus sp. WH 8102
 
Synechococcus sp. JA-3-3Ab

Gene: CYA_2605: Flavodoxin
 2
Gloeobacter violaceus PCC 7421

Gene: gvip027: Flavodoxin

Gene: gvip026: Flavodoxin
Flavodoxin
 
CRON 3.
perR
 
Trichodesmium erythraeum IMS101
*
Cyanothece sp. ATCC 51142

Site:
position = -134
score = 5.55179
sequence = TCAGAATAATTCTTA

Gene: cce_3127: Peroxide stress response transcriptional regulator, Fur family
 
Cyanothece sp. PCC 8801
 
Nostoc sp. PCC 7120
 
Microcystis aeruginosa NIES-843
*
Synechocystis sp. PCC 6803

Site:
position = -233
score = 5.29997
sequence = TCAGAATAGTTCTGA

Site:
position = -181
score = 4.76793
sequence = TTATAATTATTCTAT

Gene: slr1738: Peroxide stress response transcriptional regulator, Fur family
 
Synechococcus sp. PCC 7002

Gene: SYNPCC7002_A1836: Peroxide stress response transcriptional regulator, Fur family
*
Cyanothece sp. PCC 7425

Site:
position = -138
score = 5.20207
sequence = CCAGAATAATTCTGA

Site:
position = -86
score = 5.21115
sequence = TGAGAATTATACTAA

Gene: Cyan7425_1597: Peroxide stress response transcriptional regulator, Fur family
 
Prochlorococcus marinus str. MIT 9313
 
Thermosynechococcus elongatus BP-1
*
Synechococcus elongatus PCC 7942

Site:
position = -119
score = 5.05841
sequence = TAAGAATAAGTCTTA

Gene: Synpcc7942_1648: Peroxide stress response transcriptional regulator, Fur family
 
Synechococcus sp. WH 8102
 
Synechococcus sp. JA-3-3Ab
*
Gloeobacter violaceus PCC 7421

Site:
position = -56
score = 4.85764
sequence = TTAGATCTATTCTAA

Gene: glr3733: Peroxide stress response transcriptional regulator, Fur family
Peroxide stress response transcriptional regulator, Fur family
 
CRON 4.
ahpC
 
Trichodesmium erythraeum IMS101

Gene: Tery_0162: Peroxiredoxin
*
Cyanothece sp. ATCC 51142

Site:
position = -63
score = 5.75852
sequence = TAAGAATTATTCTGA

Gene: cce_3126: Peroxiredoxin
 
Cyanothece sp. PCC 8801

Gene: PCC8801_0474: Peroxiredoxin
 
Nostoc sp. PCC 7120

Gene: all1541: Peroxiredoxin
 
Microcystis aeruginosa NIES-843

Gene: MAE_62780: Peroxiredoxin
*
Synechocystis sp. PCC 6803

Site:
position = -144
score = 4.72516
sequence = ATAGAATAATTATAA

Site:
position = -92
score = 5.3933
sequence = TCAGAACTATTCTGA

Gene: sll1621: Peroxiredoxin
*
Synechococcus sp. PCC 7002

Site:
position = -79
score = 5.50828
sequence = TAAGAATTATTCTGG

Gene: SYNPCC7002_A0793: Peroxiredoxin
*
Cyanothece sp. PCC 7425

Site:
position = -138
score = 4.81945
sequence = TTAGTATAATTCTCA

Site:
position = -86
score = 5.50828
sequence = TCAGAATTATTCTGG

Gene: Cyan7425_1596: Peroxiredoxin
 
Prochlorococcus marinus str. MIT 9313

Gene: PMT1186: Peroxiredoxin
 
Thermosynechococcus elongatus BP-1
 
Synechococcus elongatus PCC 7942
 
Synechococcus sp. WH 8102
 
Synechococcus sp. JA-3-3Ab
 
Gloeobacter violaceus PCC 7421
Peroxiredoxin
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD