Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog HrcA - Cyanobacteria

Properties
Regulator type: Transcription factor
Regulator family: HrcA
Regulation mode: repressor
Biological process: Heat shock response
Effector: Heat shock
Phylum: Cyanobacteria
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 29 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Cyanothece sp. ATCC 51142 4 3
Cyanothece sp. PCC 7425 3 2
Cyanothece sp. PCC 8801 3 2
Gloeobacter violaceus PCC 7421 4 2
Microcystis aeruginosa NIES-843 3 2
Nostoc sp. PCC 7120 4 3
Prochlorococcus marinus str. MIT 9313 2 1
Synechococcus elongatus PCC 7942 2 1
Synechococcus sp. JA-3-3Ab 3 2
Synechococcus sp. PCC 7002 4 3
Synechococcus sp. WH 8102 3 2
Synechocystis sp. PCC 6803 3 2
Thermosynechococcus elongatus BP-1 2 1
Trichodesmium erythraeum IMS101 4 3
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
groES
*
Cyanothece sp. ATCC 51142

Site:
position = -79
score = 10.2105
sequence = TTAGCACTC-(9)-GAGTGCTAA

Gene: cce_1343: Heat shock protein 60 family co-chaperone GroES
*
Cyanothece sp. PCC 7425

Site:
position = -123
score = 10.2105
sequence = TTAGCACTC-(9)-GAGTGCTAA

Gene: Cyan7425_5138: Heat shock protein 60 family co-chaperone GroES
*
Cyanothece sp. PCC 8801

Site:
position = -82
score = 10.2105
sequence = TTAGCACTC-(9)-GAGTGCTAA

Gene: PCC8801_2855: Heat shock protein 60 family co-chaperone GroES
*2
Gloeobacter violaceus PCC 7421

Site:
position = -92
score = 9.61996
sequence = TTAGCACTC-(9)-CAGTGCTAA

Gene: gvip139: Heat shock protein 60 family co-chaperone GroES

Site:
position = -66
score = 9.6194
sequence = TTAGCACTT-(9)-GAGTGCTAA

Gene: gvip396: Heat shock protein 60 family co-chaperone GroES
*
Microcystis aeruginosa NIES-843

Site:
position = -74
score = 10.2105
sequence = TTAGCACTC-(9)-GAGTGCTAA

Gene: MAE_46070: Heat shock protein 60 family co-chaperone GroES
*
Nostoc sp. PCC 7120

Site:
position = -45
score = 10.2105
sequence = TTAGCACTC-(9)-GAGTGCTAA

Gene: alr3661: Heat shock protein 60 family co-chaperone GroES
*
Prochlorococcus marinus str. MIT 9313

Site:
position = -81
score = 9.15116
sequence = TTGGCACTC-(9)-GAGTGCTAC

Gene: PMT1450: Heat shock protein 60 family co-chaperone GroES
*
Synechococcus elongatus PCC 7942

Site:
position = -81
score = 10.2105
sequence = TTAGCACTC-(9)-GAGTGCTAA

Gene: Synpcc7942_2314: Heat shock protein 60 family co-chaperone GroES
*
Synechococcus sp. JA-3-3Ab

Site:
position = -108
score = 9.73197
sequence = CTAGCACTC-(9)-GAGTGCTAA

Gene: CYA_1406: Heat shock protein 60 family co-chaperone GroES
*
Synechococcus sp. PCC 7002

Site:
position = -76
score = 10.2105
sequence = TTAGCACTC-(9)-GAGTGCTAA

Gene: SYNPCC7002_A2457: Heat shock protein 60 family co-chaperone GroES
*
Synechococcus sp. WH 8102

Site:
position = -77
score = 8.56063
sequence = TTGGCACTC-(9)-GAGTGCCAG

Gene: SYNW0513: Heat shock protein 60 family co-chaperone GroES
*
Synechocystis sp. PCC 6803

Site:
position = -74
score = 10.2105
sequence = TTAGCACTC-(9)-GAGTGCTAA

Gene: slr2075: Heat shock protein 60 family co-chaperone GroES
*
Thermosynechococcus elongatus BP-1

Site:
position = -126
score = 10.2105
sequence = TTAGCACTC-(9)-GAGTGCTAA

Gene: null: Heat shock protein 60 family co-chaperone GroES
*
Trichodesmium erythraeum IMS101

Site:
position = -104
score = 10.2105
sequence = TTAGCACTC-(9)-GAGTGCTAA

Gene: Tery_4326: Heat shock protein 60 family co-chaperone GroES
Heat shock protein 60 family co-chaperone GroES
groEL
 
Cyanothece sp. ATCC 51142

Gene: cce_1344: Heat shock protein 60 family chaperone GroEL
 
Cyanothece sp. PCC 7425

Gene: Cyan7425_5137: Heat shock protein 60 family chaperone GroEL
 
Cyanothece sp. PCC 8801

Gene: PCC8801_2854: Heat shock protein 60 family chaperone GroEL
 2
Gloeobacter violaceus PCC 7421

Gene: gvip138: Heat shock protein 60 family chaperone GroEL

Gene: gvip397: Heat shock protein 60 family chaperone GroEL
 
Microcystis aeruginosa NIES-843

Gene: MAE_46080: Heat shock protein 60 family chaperone GroEL
 
Nostoc sp. PCC 7120

Gene: alr3662: Heat shock protein 60 family chaperone GroEL
 
Prochlorococcus marinus str. MIT 9313

Gene: PMT1449: Heat shock protein 60 family chaperone GroEL
 
Synechococcus elongatus PCC 7942

Gene: Synpcc7942_2313: Heat shock protein 60 family chaperone GroEL
 
Synechococcus sp. JA-3-3Ab

Gene: CYA_1407: Heat shock protein 60 family chaperone GroEL
 
Synechococcus sp. PCC 7002

Gene: SYNPCC7002_A2458: Heat shock protein 60 family chaperone GroEL
 
Synechococcus sp. WH 8102

Gene: SYNW0514: Heat shock protein 60 family chaperone GroEL
 
Synechocystis sp. PCC 6803

Gene: slr2076: Heat shock protein 60 family chaperone GroEL
 
Thermosynechococcus elongatus BP-1

Gene: null: Heat shock protein 60 family chaperone GroEL
 
Trichodesmium erythraeum IMS101

Gene: Tery_4327: Heat shock protein 60 family chaperone GroEL
Heat shock protein 60 family chaperone GroEL
 
CRON 2.
groEL2
*
Cyanothece sp. ATCC 51142

Site:
position = -114
score = 10.2105
sequence = TTAGCACTC-(9)-GAGTGCTAA

Gene: cce_3330: Heat shock protein 60 family chaperone GroEL
*
Cyanothece sp. PCC 7425

Site:
position = -139
score = 10.2105
sequence = TTAGCACTC-(9)-GAGTGCTAA

Gene: Cyan7425_2334: Heat shock protein 60 family chaperone GroEL
*
Cyanothece sp. PCC 8801

Site:
position = -199
score = 10.2105
sequence = TTAGCACTC-(9)-GAGTGCTAA

Gene: PCC8801_1190: Heat shock protein 60 family chaperone GroEL
 
Gloeobacter violaceus PCC 7421
*
Microcystis aeruginosa NIES-843

Site:
position = -63
score = 10.2105
sequence = TTAGCACTC-(9)-GAGTGCTAA

Gene: MAE_03410: Heat shock protein 60 family chaperone GroEL
*
Nostoc sp. PCC 7120

Site:
position = -59
score = 10.2105
sequence = TTAGCACTC-(9)-GAGTGCTAA

Gene: alr1896: Heat shock protein 60 family chaperone GroEL
 
Prochlorococcus marinus str. MIT 9313

Gene: PMT1334: Heat shock protein 60 family chaperone GroEL
 
Synechococcus elongatus PCC 7942

Gene: Synpcc7942_0685: Heat shock protein 60 family chaperone GroEL
*
Synechococcus sp. JA-3-3Ab

Site:
position = -131
score = 10.2105
sequence = TTAGCACTC-(9)-GAGTGCTAA

Gene: CYA_0332: Heat shock protein 60 family chaperone GroEL
*
Synechococcus sp. PCC 7002

Site:
position = -65
score = 9.6194
sequence = TTAGCAGTC-(9)-GAGTGCTAA

Gene: SYNPCC7002_A0147: Heat shock protein 60 family chaperone GroEL
 
Synechococcus sp. WH 8102

Gene: SYNW1854: Heat shock protein 60 family chaperone GroEL
*
Synechocystis sp. PCC 6803

Site:
position = -81
score = 10.2105
sequence = TTAGCACTC-(9)-GAGTGCTAA

Gene: sll0416: Heat shock protein 60 family chaperone GroEL
 
Thermosynechococcus elongatus BP-1

Gene: null: Heat shock protein 60 family chaperone GroEL
*
Trichodesmium erythraeum IMS101

Site:
position = -58
score = 9.73197
sequence = CTAGCACTC-(9)-GAGTGCTAA

Gene: Tery_0270: Heat shock protein 60 family chaperone GroEL
Heat shock protein 60 family chaperone GroEL
 
CRON 3.
SYNPCC7002_A0107
*
Cyanothece sp. ATCC 51142

Site:
position = -108
score = 9.42606
sequence = TTAGCACTC-(9)-AAGTGCTAA

Gene: cce_0796: Conserved hypothetical protein
 
Cyanothece sp. PCC 7425

Gene: Cyan7425_2301: Conserved hypothetical protein
 
Cyanothece sp. PCC 8801
 
Gloeobacter violaceus PCC 7421
 
Microcystis aeruginosa NIES-843
*
Nostoc sp. PCC 7120

Site:
position = -166
score = 10.2105
sequence = TTAGCACTC-(9)-GAGTGCTAA

Gene: all4757: Conserved hypothetical protein
 
Prochlorococcus marinus str. MIT 9313
 
Synechococcus elongatus PCC 7942

Gene: Synpcc7942_1042: Conserved hypothetical protein
 
Synechococcus sp. JA-3-3Ab

Gene: CYA_1572: Conserved hypothetical protein
*
Synechococcus sp. PCC 7002

Site:
position = -238
score = 8.6323
sequence = TTAGCACTC-(9)-AACTGCTAA

Gene: SYNPCC7002_A0107: Conserved hypothetical protein
*
Synechococcus sp. WH 8102

Site:
position = -119
score = 10.2105
sequence = TTAGCACTC-(9)-GAGTGCTAA

Gene: SYNW2498: Conserved hypothetical protein
 
Synechocystis sp. PCC 6803

Gene: slr1770: Conserved hypothetical protein
 
Thermosynechococcus elongatus BP-1
*
Trichodesmium erythraeum IMS101

Site:
position = -281
score = 9.41674
sequence = TTAGCACTC-(9)-GACTGCTAA

Gene: Tery_2626: Conserved hypothetical protein
Conserved hypothetical protein
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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