Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog Rex1 - Thermotogales

Properties
Regulator type: Transcription factor
Regulator family: Rex
Regulation mode: repressor
Biological process: Energy metabolism
Effector: NADH
Phylum: Thermotogae
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 10 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Fervidobacterium nodosum Rt17-B1 5 2
Petrotoga mobilis SJ95
Thermosipho africanus TCF52B 7 1
Thermosipho melanesiensis BI429 7 1
Thermotoga lettingae TMO 7 1
Thermotoga maritima MSB8 8 1
Thermotoga naphthophila RKU-10 2 1
Thermotoga neapolitana DSM 4359 7 1
Thermotoga petrophila RKU-1 7 1
Thermotoga sp. RQ2 7 1
Thermotogales bacterium TBF 19.5.1
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
TM1420
*
Fervidobacterium nodosum Rt17-B1

Site:
position = -52
score = 5.99255
sequence = TCGTGAAATAATTAACGA

Gene: Fnod_0319: Fe-hydrogenase, thioredoxin subunit, 2Fe-2S cluster binding protein
 
Petrotoga mobilis SJ95
*
Thermosipho africanus TCF52B

Site:
position = -49
score = 5.03286
sequence = TCGTGAAAATAATAACGT

Gene: THA_782: Fe-hydrogenase, thioredoxin subunit, 2Fe-2S cluster binding protein
*
Thermosipho melanesiensis BI429

Site:
position = -43
score = 5.1331
sequence = TCGTGAAAAATATAACGT

Gene: Tmel_0495: Fe-hydrogenase, thioredoxin subunit, 2Fe-2S cluster binding protein
*
Thermotoga lettingae TMO

Site:
position = 32
score = 6.09555
sequence = TCGTGAAATAAATAACGA

Gene: Tlet_0957: Fe-hydrogenase, thioredoxin subunit, 2Fe-2S cluster binding protein
*
Thermotoga maritima MSB8

Site:
position = -95
score = 6.57891
sequence = TTGTGAAGTAGGTAACAA

Gene: TM1420: Fe-hydrogenase, thioredoxin subunit, 2Fe-2S cluster binding protein
*
Thermotoga naphthophila RKU-10

Site:
position = -101
score = 6.57891
sequence = TTGTGAAGTAGGTAACAA

Gene: Tnap_1390: Fe-hydrogenase, thioredoxin subunit, 2Fe-2S cluster binding protein
*
Thermotoga neapolitana DSM 4359

Site:
position = -101
score = 5.85098
sequence = TTGTGAATACAGTAACAA

Gene: CTN_1072: Fe-hydrogenase, thioredoxin subunit, 2Fe-2S cluster binding protein
*
Thermotoga petrophila RKU-1

Site:
position = -119
score = 6.57891
sequence = TTGTGAAGTAGGTAACAA

Gene: Tpet_1372: Fe-hydrogenase, thioredoxin subunit, 2Fe-2S cluster binding protein
*
Thermotoga sp. RQ2

Site:
position = -101
score = 6.57891
sequence = TTGTGAAGTAGGTAACAA

Gene: TRQ2_1314: Fe-hydrogenase, thioredoxin subunit, 2Fe-2S cluster binding protein
 
Thermotogales bacterium TBF 19.5.1
Fe-hydrogenase, thioredoxin subunit, 2Fe-2S cluster binding protein
TM1421
 
Fervidobacterium nodosum Rt17-B1

Gene: Fnod_0318: Fe-hydrogenase, 2Fe-2S iron-sulfur cluster binding protein
 
Petrotoga mobilis SJ95
 
Thermosipho africanus TCF52B

Gene: THA_783: Fe-hydrogenase, 2Fe-2S iron-sulfur cluster binding protein
 
Thermosipho melanesiensis BI429

Gene: Tmel_0494: Fe-hydrogenase, 2Fe-2S iron-sulfur cluster binding protein
 
Thermotoga lettingae TMO

Gene: Tlet_0956: Fe-hydrogenase, 2Fe-2S iron-sulfur cluster binding protein
 2
Thermotoga maritima MSB8

Gene: TM1421: Fe-hydrogenase, 2Fe-2S iron-sulfur cluster binding protein

Gene: TM1422: Fe-hydrogenase, 2Fe-2S iron-sulfur cluster binding protein
 
Thermotoga naphthophila RKU-10

Gene: Tnap_1389: Fe-hydrogenase, 2Fe-2S iron-sulfur cluster binding protein
 
Thermotoga neapolitana DSM 4359

Gene: CTN_1071: Fe-hydrogenase, 2Fe-2S iron-sulfur cluster binding protein
 
Thermotoga petrophila RKU-1

Gene: Tpet_1371: Fe-hydrogenase, 2Fe-2S iron-sulfur cluster binding protein
 
Thermotoga sp. RQ2

Gene: TRQ2_1315: Fe-hydrogenase, 2Fe-2S iron-sulfur cluster binding protein
 
Thermotogales bacterium TBF 19.5.1
Fe-hydrogenase, 2Fe-2S iron-sulfur cluster binding protein
TM1423
 
Fervidobacterium nodosum Rt17-B1

Gene: Fnod_0317: predicted protein serine/threonine phosphatase
 
Petrotoga mobilis SJ95
 
Thermosipho africanus TCF52B

Gene: THA_784: predicted protein serine/threonine phosphatase
 
Thermosipho melanesiensis BI429

Gene: Tmel_0493: predicted protein serine/threonine phosphatase
 
Thermotoga lettingae TMO

Gene: Tlet_0955: predicted protein serine/threonine phosphatase
 
Thermotoga maritima MSB8

Gene: TM1423: predicted protein serine/threonine phosphatase
 
Thermotoga naphthophila RKU-10
 
Thermotoga neapolitana DSM 4359

Gene: CTN_1070: predicted protein serine/threonine phosphatase
 
Thermotoga petrophila RKU-1

Gene: Tpet_1370: predicted protein serine/threonine phosphatase
 
Thermotoga sp. RQ2

Gene: TRQ2_1316: predicted protein serine/threonine phosphatase
 
Thermotogales bacterium TBF 19.5.1
predicted protein serine/threonine phosphatase
hydC
*
Fervidobacterium nodosum Rt17-B1

Site:
position = -125
score = 5.77582
sequence = TTGTGAAAAAAATAACGT

Gene: Fnod_0227: Fe-hydrogenase, gamma subunit, FeS cluster containing
 
Petrotoga mobilis SJ95
 
Thermosipho africanus TCF52B

Gene: THA_785: Fe-hydrogenase, gamma subunit, FeS cluster containing
 
Thermosipho melanesiensis BI429

Gene: Tmel_0492: Fe-hydrogenase, gamma subunit, FeS cluster containing
 
Thermotoga lettingae TMO

Gene: Tlet_0954: Fe-hydrogenase, gamma subunit, FeS cluster containing
 
Thermotoga maritima MSB8

Gene: TM1424: Fe-hydrogenase, gamma subunit, FeS cluster containing
 
Thermotoga naphthophila RKU-10

Gene: Tnap_1387: Fe-hydrogenase, gamma subunit, FeS cluster containing
 
Thermotoga neapolitana DSM 4359

Gene: CTN_1069: Fe-hydrogenase, gamma subunit, FeS cluster containing
 
Thermotoga petrophila RKU-1

Gene: Tpet_1369: Fe-hydrogenase, gamma subunit, FeS cluster containing
 
Thermotoga sp. RQ2

Gene: TRQ2_1317: Fe-hydrogenase, gamma subunit, FeS cluster containing
 
Thermotogales bacterium TBF 19.5.1
Fe-hydrogenase, gamma subunit, FeS cluster containing
hydB
 
Fervidobacterium nodosum Rt17-B1

Gene: Fnod_0226: Fe-hydrogenase, beta subunit, FeS cluster, FMN, NAD(P)H dehydrogenase activity
 
Petrotoga mobilis SJ95
 
Thermosipho africanus TCF52B

Gene: THA_786: Fe-hydrogenase, beta subunit, FeS cluster, FMN, NAD(P)H dehydrogenase activity
 
Thermosipho melanesiensis BI429

Gene: Tmel_0491: Fe-hydrogenase, beta subunit, FeS cluster, FMN, NAD(P)H dehydrogenase activity
 
Thermotoga lettingae TMO

Gene: Tlet_0953: Fe-hydrogenase, beta subunit, FeS cluster, FMN, NAD(P)H dehydrogenase activity
 
Thermotoga maritima MSB8

Gene: TM1425: Fe-hydrogenase, beta subunit, FeS cluster, FMN, NAD(P)H dehydrogenase activity
 
Thermotoga naphthophila RKU-10

Gene: Tnap_1386: Fe-hydrogenase, beta subunit, FeS cluster, FMN, NAD(P)H dehydrogenase activity
 
Thermotoga neapolitana DSM 4359

Gene: CTN_1068: Fe-hydrogenase, beta subunit, FeS cluster, FMN, NAD(P)H dehydrogenase activity
 
Thermotoga petrophila RKU-1

Gene: Tpet_1368: Fe-hydrogenase, beta subunit, FeS cluster, FMN, NAD(P)H dehydrogenase activity
 
Thermotoga sp. RQ2

Gene: TRQ2_1318: Fe-hydrogenase, beta subunit, FeS cluster, FMN, NAD(P)H dehydrogenase activity
 
Thermotogales bacterium TBF 19.5.1
Fe-hydrogenase, beta subunit, FeS cluster, FMN, NAD(P)H dehydrogenase activity
hydA
 
Fervidobacterium nodosum Rt17-B1

Gene: Fnod_0225: Fe-hydrogenase, alpha subunit, FeS cluster, hydrogenase activity
 
Petrotoga mobilis SJ95
 
Thermosipho africanus TCF52B

Gene: THA_787: Fe-hydrogenase, alpha subunit, FeS cluster, hydrogenase activity
 
Thermosipho melanesiensis BI429

Gene: Tmel_0490: Fe-hydrogenase, alpha subunit, FeS cluster, hydrogenase activity
 
Thermotoga lettingae TMO

Gene: Tlet_0952: Fe-hydrogenase, alpha subunit, FeS cluster, hydrogenase activity
 
Thermotoga maritima MSB8

Gene: TM1426: Fe-hydrogenase, alpha subunit, FeS cluster, hydrogenase activity
 
Thermotoga naphthophila RKU-10

Gene: Tnap_1385: Fe-hydrogenase, alpha subunit, FeS cluster, hydrogenase activity
 
Thermotoga neapolitana DSM 4359

Gene: CTN_1067: Fe-hydrogenase, alpha subunit, FeS cluster, hydrogenase activity
 
Thermotoga petrophila RKU-1

Gene: Tpet_1367: Fe-hydrogenase, alpha subunit, FeS cluster, hydrogenase activity
 
Thermotoga sp. RQ2

Gene: TRQ2_1319: Fe-hydrogenase, alpha subunit, FeS cluster, hydrogenase activity
 
Thermotogales bacterium TBF 19.5.1
Fe-hydrogenase, alpha subunit, FeS cluster, hydrogenase activity
rex1
 
Fervidobacterium nodosum Rt17-B1

Gene: Fnod_0224: Redox sensitive transcriptional regulator paralog, Rex family
 
Petrotoga mobilis SJ95
 
Thermosipho africanus TCF52B

Gene: THA_788: Redox sensitive transcriptional regulator paralog, Rex family
 
Thermosipho melanesiensis BI429

Gene: Tmel_0489: Redox sensitive transcriptional regulator paralog, Rex family
 
Thermotoga lettingae TMO

Gene: Tlet_0951: Redox sensitive transcriptional regulator paralog, Rex family
 
Thermotoga maritima MSB8

Gene: TM1427: Redox sensitive transcriptional regulator paralog, Rex family
 
Thermotoga naphthophila RKU-10

Gene: Tnap_1384: Redox sensitive transcriptional regulator paralog, Rex family
 
Thermotoga neapolitana DSM 4359

Gene: CTN_1066: Redox sensitive transcriptional regulator paralog, Rex family
 
Thermotoga petrophila RKU-1

Gene: Tpet_1366: Redox sensitive transcriptional regulator paralog, Rex family
 
Thermotoga sp. RQ2

Gene: TRQ2_1320: Redox sensitive transcriptional regulator paralog, Rex family
 
Thermotogales bacterium TBF 19.5.1
Redox sensitive transcriptional regulator paralog, Rex family
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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