Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog CsoR - Bacillales

Properties
Regulator type: Transcription factor
Regulator family: CsoR
Regulation mode: repressor
Biological process: Copper resistance
Effector: Copper ion, (Cu+)
Phylum: Firmicutes
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 25 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Bacillus subtilis subsp. subtilis str. 168 3 3
Bacillus amyloliquefaciens FZB42 2 2
Bacillus pumilus SAFR-032 2 2
Bacillus licheniformis DSM 13 2 2
Anoxybacillus flavithermus WK1 3 1
Geobacillus kaustophilus HTA426 3 1
Bacillus cereus ATCC 14579 2 2
Bacillus halodurans C-125 2 2
Bacillus clausii KSM-K16 3 3
Oceanobacillus iheyensis HTE831 4 2
Paenibacillus sp. JDR-2 7 3
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
csoR
 
Bacillus subtilis subsp. subtilis str. 168

Gene: BSU33520: Transcriptional repressor of copper utilisation, RcnR family
 
Bacillus amyloliquefaciens FZB42

Gene: RBAM_030700: Transcriptional repressor of copper utilisation, RcnR family
 
Bacillus pumilus SAFR-032

Gene: BPUM_3023: Transcriptional repressor of copper utilisation, RcnR family
 
Bacillus licheniformis DSM 13

Gene: BLi03555: Transcriptional repressor of copper utilisation, RcnR family
*
Anoxybacillus flavithermus WK1

Site:
position = -42
score = 4.32281
sequence = ATACCCATTACCGGTAT

Gene: Aflv_1217: Transcriptional repressor of copper utilisation, RcnR family
*
Geobacillus kaustophilus HTA426

Site:
position = -43
score = 4.32281
sequence = ATACCCATTACCGGTAT

Gene: GK0901: Transcriptional repressor of copper utilisation, RcnR family
 
Bacillus cereus ATCC 14579

Gene: BC3732: Transcriptional repressor of copper utilisation, RcnR family
 
Bacillus halodurans C-125

Gene: BH0558: Transcriptional repressor of copper utilisation, RcnR family
 
Bacillus clausii KSM-K16

Gene: ABC2444: Transcriptional repressor of copper utilisation, RcnR family
*
Oceanobacillus iheyensis HTE831

Site:
position = -194
score = 4.60647
sequence = ATACCCCAACGAAGTAT

Site:
position = -49
score = 5.2131
sequence = ATACATTAGGGGGGTAT

Gene: OB1141: Transcriptional repressor of copper utilisation, RcnR family
*
Paenibacillus sp. JDR-2

Site:
position = -59
score = 5.86074
sequence = ATACCCCTAGGGGGTAT

Site:
position = -23
score = 5.55422
sequence = ATACCCCCTGGAGGTAT

Gene: Pjdr2_5324: Transcriptional repressor of copper utilisation, RcnR family
Transcriptional repressor of copper utilisation, RcnR family
copA
*
Bacillus subtilis subsp. subtilis str. 168

Site:
position = -34
score = 5.51705
sequence = ATACCCCCCAGGTGTAT

Gene: BSU33500: Copper-translocating P-type ATPase (EC 3.6.3.4)
*
Bacillus amyloliquefaciens FZB42

Site:
position = -27
score = 5.39408
sequence = ATACCCCCTGGGGGTTT

Gene: RBAM_030680: Copper-translocating P-type ATPase (EC 3.6.3.4)
*
Bacillus pumilus SAFR-032

Site:
position = -34
score = 5.57323
sequence = ATACCCCCATGGTGTAT

Gene: BPUM_3021: Copper-translocating P-type ATPase (EC 3.6.3.4)
*
Bacillus licheniformis DSM 13

Site:
position = -33
score = 5.17188
sequence = ATACCTACAAGGGGTAT

Gene: BLi03553: Copper-translocating P-type ATPase (EC 3.6.3.4)
 
Anoxybacillus flavithermus WK1

Gene: Aflv_1218: Copper-translocating P-type ATPase (EC 3.6.3.4)
 
Geobacillus kaustophilus HTA426

Gene: GK0902: Copper-translocating P-type ATPase (EC 3.6.3.4)
*
Bacillus cereus ATCC 14579

Site:
position = -32
score = 5.55679
sequence = ATACCTCATAAGGGTAT

Gene: BC3730: Copper-translocating P-type ATPase (EC 3.6.3.4)
*
Bacillus halodurans C-125

Site:
position = -31
score = 5.25769
sequence = ATACCTAATAGGGGTAT

Gene: BH0557: Copper-translocating P-type ATPase (EC 3.6.3.4)
*
Bacillus clausii KSM-K16

Site:
position = -64
score = 5.86331
sequence = ATACCCCTATAGGGTAT

Gene: ABC3231: Copper-translocating P-type ATPase (EC 3.6.3.4)
 
Oceanobacillus iheyensis HTE831

Gene: OB1142: Copper-translocating P-type ATPase (EC 3.6.3.4)
*
Paenibacillus sp. JDR-2

Site:
position = -85
score = 5.17188
sequence = ATACCCCCAGTAGGTAT

Gene: Pjdr2_2774: Copper-translocating P-type ATPase (EC 3.6.3.4)
Copper-translocating P-type ATPase (EC 3.6.3.4)
copZ
*
Bacillus subtilis subsp. subtilis str. 168

Site:
position = -57
score = 5.89293
sequence = ATACCCTACGGGGGTAT

Gene: BSU33510: Copper insertion chaperone and transporter component
*
Bacillus amyloliquefaciens FZB42

Site:
position = -44
score = 5.89293
sequence = ATACCCTACAGGGGTAT

Gene: RBAM_030690: Copper insertion chaperone and transporter component
*
Bacillus pumilus SAFR-032

Site:
position = -55
score = 5.8955
sequence = ATACCCTACTAGGGTAT

Gene: BPUM_3022: Copper insertion chaperone and transporter component
*
Bacillus licheniformis DSM 13

Site:
position = -65
score = 5.89293
sequence = ATACCCTACAGGGGTAT

Gene: BLi03554: Copper insertion chaperone and transporter component
 
Anoxybacillus flavithermus WK1

Gene: Aflv_1219: Copper insertion chaperone and transporter component
 
Geobacillus kaustophilus HTA426

Gene: GK0903: Copper insertion chaperone and transporter component
*
Bacillus cereus ATCC 14579

Site:
position = -71
score = 5.11976
sequence = TTACCTTAGGGGGGTAT

Gene: BC3731: Copper insertion chaperone and transporter component
*
Bacillus halodurans C-125

Site:
position = -54
score = 4.90852
sequence = ATACAATAGGGGGGTAT

Gene: BH0556: Copper insertion chaperone and transporter component
*
Bacillus clausii KSM-K16

Site:
position = -57
score = 5.12515
sequence = ATACCTGACGGGGGTAT

Gene: ABC2443: Copper insertion chaperone and transporter component
 
Oceanobacillus iheyensis HTE831

Gene: OB1143: Copper insertion chaperone and transporter component
 
Paenibacillus sp. JDR-2

Gene: Pjdr2_5323: Copper insertion chaperone and transporter component
Copper insertion chaperone and transporter component
 
CRON 2.
Pjdr2_3010
 
Bacillus subtilis subsp. subtilis str. 168
 
Bacillus amyloliquefaciens FZB42
 
Bacillus pumilus SAFR-032
 
Bacillus licheniformis DSM 13
 
Anoxybacillus flavithermus WK1
 
Geobacillus kaustophilus HTA426

Gene: GK1690: Two component transcriptional regulator, winged helix family
 
Bacillus cereus ATCC 14579
 
Bacillus halodurans C-125
 
Bacillus clausii KSM-K16
 
Oceanobacillus iheyensis HTE831
*
Paenibacillus sp. JDR-2

Site:
position = -69
score = 5.50803
sequence = ATACCCATGGGGGGTAT

Gene: Pjdr2_3010: Two component transcriptional regulator, winged helix family
Two component transcriptional regulator, winged helix family
Pjdr2_3011
 
Bacillus subtilis subsp. subtilis str. 168
 
Bacillus amyloliquefaciens FZB42
 
Bacillus pumilus SAFR-032
 
Bacillus licheniformis DSM 13
 
Anoxybacillus flavithermus WK1
 
Geobacillus kaustophilus HTA426

Gene: GK1689: Two-component sensor histidine kinase
 
Bacillus cereus ATCC 14579
 
Bacillus halodurans C-125
 
Bacillus clausii KSM-K16
 
Oceanobacillus iheyensis HTE831
 
Paenibacillus sp. JDR-2

Gene: Pjdr2_3011: Two-component sensor histidine kinase
Two-component sensor histidine kinase
ydhK
*
Bacillus subtilis subsp. subtilis str. 168

Site:
position = -43
score = 5.19603
sequence = ATACCGTTCGGGGGTAT

Gene: BSU05790: Hypothetical protein
 
Bacillus amyloliquefaciens FZB42
 
Bacillus pumilus SAFR-032
 
Bacillus licheniformis DSM 13
 
Anoxybacillus flavithermus WK1
 
Geobacillus kaustophilus HTA426

Gene: GK1692: Hypothetical protein
 
Bacillus cereus ATCC 14579
 
Bacillus halodurans C-125
*
Bacillus clausii KSM-K16

Site:
position = -51
score = 5.97874
sequence = ATACCCCACTAGGGTAT

Gene: ABC3339: Hypothetical protein
*
Oceanobacillus iheyensis HTE831

Site:
position = -128
score = 5.2131
sequence = ATACCCCCCTAATGTAT

Gene: OB1140: Hypothetical protein
 
Paenibacillus sp. JDR-2

Gene: Pjdr2_3012: Hypothetical protein
Hypothetical protein
yoxB
 
Bacillus subtilis subsp. subtilis str. 168

Gene: BSU18520: Hypothetical protein
 
Bacillus amyloliquefaciens FZB42

Gene: RBAM_018730: Hypothetical protein
 
Bacillus pumilus SAFR-032
 
Bacillus licheniformis DSM 13
 
Anoxybacillus flavithermus WK1
 
Geobacillus kaustophilus HTA426
 
Bacillus cereus ATCC 14579
 
Bacillus halodurans C-125
 
Bacillus clausii KSM-K16
 
Oceanobacillus iheyensis HTE831
 
Paenibacillus sp. JDR-2

Gene: Pjdr2_3013: Hypothetical protein
Hypothetical protein
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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