Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog IolR1 - Bacillales

Properties
Regulator type: Transcription factor
Regulator family: LacI
Regulation mode: repressor
Biological process: Inositol utilization
Effector:
Phylum: Firmicutes
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 13 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Bacillus subtilis subsp. subtilis str. 168 2 2
Bacillus amyloliquefaciens FZB42
Bacillus pumilus SAFR-032
Bacillus licheniformis DSM 13 1 1
Anoxybacillus flavithermus WK1
Geobacillus kaustophilus HTA426 13 2
Bacillus cereus ATCC 14579
Bacillus halodurans C-125 6 2
Bacillus clausii KSM-K16
Oceanobacillus iheyensis HTE831
Paenibacillus sp. JDR-2 7 1
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
BH2322
 
Bacillus subtilis subsp. subtilis str. 168
 
Bacillus amyloliquefaciens FZB42
 
Bacillus pumilus SAFR-032
 
Bacillus licheniformis DSM 13
 
Anoxybacillus flavithermus WK1
*
Geobacillus kaustophilus HTA426

Site:
position = -208
score = 5.31641
sequence = GGAAAGCGCTTGCC

Gene: GK1894: Inositol transport system ATP-binding protein
 
Bacillus cereus ATCC 14579
 
Bacillus halodurans C-125

Gene: BH2322: Inositol transport system ATP-binding protein
 
Bacillus clausii KSM-K16
 
Oceanobacillus iheyensis HTE831
 
Paenibacillus sp. JDR-2
Inositol transport system ATP-binding protein
BH2321
 
Bacillus subtilis subsp. subtilis str. 168
 
Bacillus amyloliquefaciens FZB42
 
Bacillus pumilus SAFR-032
 
Bacillus licheniformis DSM 13
 
Anoxybacillus flavithermus WK1
 
Geobacillus kaustophilus HTA426

Gene: GK1893: Inositol transport system permease protein
 
Bacillus cereus ATCC 14579
 
Bacillus halodurans C-125

Gene: BH2321: Inositol transport system permease protein
 
Bacillus clausii KSM-K16
 
Oceanobacillus iheyensis HTE831
 
Paenibacillus sp. JDR-2
Inositol transport system permease protein
iolI
 
Bacillus subtilis subsp. subtilis str. 168

Gene: BSU39680: Inosose isomerase (EC 5.3.99.-)
 
Bacillus amyloliquefaciens FZB42

Gene: RBAM_036700: Inosose isomerase (EC 5.3.99.-)
 
Bacillus pumilus SAFR-032
 
Bacillus licheniformis DSM 13

Gene: BLi04243: Inosose isomerase (EC 5.3.99.-)
 
Anoxybacillus flavithermus WK1
 
Geobacillus kaustophilus HTA426

Gene: GK1892: Inosose isomerase (EC 5.3.99.-)
 
Bacillus cereus ATCC 14579
 
Bacillus halodurans C-125

Gene: BH2315: Inosose isomerase (EC 5.3.99.-)
 
Bacillus clausii KSM-K16
 
Oceanobacillus iheyensis HTE831
 
Paenibacillus sp. JDR-2
Inosose isomerase (EC 5.3.99.-)
iolD
 
Bacillus subtilis subsp. subtilis str. 168

Gene: BSU39730: 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase
 
Bacillus amyloliquefaciens FZB42

Gene: RBAM_036750: 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase
 
Bacillus pumilus SAFR-032
 
Bacillus licheniformis DSM 13

Gene: BLi04248: 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase
 
Anoxybacillus flavithermus WK1
 
Geobacillus kaustophilus HTA426

Gene: GK1891: 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase
 
Bacillus cereus ATCC 14579
 
Bacillus halodurans C-125

Gene: BH2318: 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase
 
Bacillus clausii KSM-K16

Gene: ABC0425: 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase
 
Oceanobacillus iheyensis HTE831
*
Paenibacillus sp. JDR-2

Site:
position = -108
score = 4.97551
sequence = GTTAAGCGCTTAAC

Gene: Pjdr2_1948: 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase
3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase
iolE
 
Bacillus subtilis subsp. subtilis str. 168
 
Bacillus amyloliquefaciens FZB42
 
Bacillus pumilus SAFR-032
 
Bacillus licheniformis DSM 13
 
Anoxybacillus flavithermus WK1
 
Geobacillus kaustophilus HTA426

Gene: GK1890: Inosose dehydratase (EC 4.2.1.44)
 
Bacillus cereus ATCC 14579
 
Bacillus halodurans C-125
 
Bacillus clausii KSM-K16
 
Oceanobacillus iheyensis HTE831
 
Paenibacillus sp. JDR-2

Gene: Pjdr2_1949: Inosose dehydratase (EC 4.2.1.44)
Inosose dehydratase (EC 4.2.1.44)
iolB
 
Bacillus subtilis subsp. subtilis str. 168

Gene: BSU39750: 5-deoxy-glucuronate isomerase (EC 5.3.1.-)
 
Bacillus amyloliquefaciens FZB42

Gene: RBAM_036770: 5-deoxy-glucuronate isomerase (EC 5.3.1.-)
 
Bacillus pumilus SAFR-032
 
Bacillus licheniformis DSM 13

Gene: BLi04250: 5-deoxy-glucuronate isomerase (EC 5.3.1.-)
 
Anoxybacillus flavithermus WK1
 
Geobacillus kaustophilus HTA426

Gene: GK1889: 5-deoxy-glucuronate isomerase (EC 5.3.1.-)
 
Bacillus cereus ATCC 14579
 
Bacillus halodurans C-125

Gene: BH2320: 5-deoxy-glucuronate isomerase (EC 5.3.1.-)
 
Bacillus clausii KSM-K16

Gene: ABC0423: 5-deoxy-glucuronate isomerase (EC 5.3.1.-)
 
Oceanobacillus iheyensis HTE831
 
Paenibacillus sp. JDR-2

Gene: Pjdr2_1953: 5-deoxy-glucuronate isomerase (EC 5.3.1.-)
5-deoxy-glucuronate isomerase (EC 5.3.1.-)
iolC
 
Bacillus subtilis subsp. subtilis str. 168

Gene: BSU39740: 5-keto-2-deoxygluconokinase (EC 2.7.1.92)
 
Bacillus amyloliquefaciens FZB42

Gene: RBAM_036760: 5-keto-2-deoxygluconokinase (EC 2.7.1.92)
 
Bacillus pumilus SAFR-032
 
Bacillus licheniformis DSM 13

Gene: BLi04249: 5-keto-2-deoxygluconokinase (EC 2.7.1.92)
 
Anoxybacillus flavithermus WK1
 
Geobacillus kaustophilus HTA426

Gene: GK1888: 5-keto-2-deoxygluconokinase (EC 2.7.1.92)
 
Bacillus cereus ATCC 14579
 
Bacillus halodurans C-125

Gene: BH2319: 5-keto-2-deoxygluconokinase (EC 2.7.1.92)
 
Bacillus clausii KSM-K16

Gene: ABC0424: 5-keto-2-deoxygluconokinase (EC 2.7.1.92)
 
Oceanobacillus iheyensis HTE831
 
Paenibacillus sp. JDR-2

Gene: Pjdr2_1950: 5-keto-2-deoxygluconokinase (EC 2.7.1.92)
5-keto-2-deoxygluconokinase (EC 2.7.1.92)
iolA
 
Bacillus subtilis subsp. subtilis str. 168

Gene: BSU39760: Methylmalonate-semialdehyde dehydrogenase (EC 1.2.1.27)
 
Bacillus amyloliquefaciens FZB42

Gene: RBAM_036780: Methylmalonate-semialdehyde dehydrogenase (EC 1.2.1.27)
 
Bacillus pumilus SAFR-032
 
Bacillus licheniformis DSM 13

Gene: BLi04251: Methylmalonate-semialdehyde dehydrogenase (EC 1.2.1.27)
 
Anoxybacillus flavithermus WK1
 
Geobacillus kaustophilus HTA426

Gene: GK1887: Methylmalonate-semialdehyde dehydrogenase (EC 1.2.1.27)
 
Bacillus cereus ATCC 14579
 
Bacillus halodurans C-125

Gene: BH2312: Methylmalonate-semialdehyde dehydrogenase (EC 1.2.1.27)
 
Bacillus clausii KSM-K16

Gene: ABC0422: Methylmalonate-semialdehyde dehydrogenase (EC 1.2.1.27)
 
Oceanobacillus iheyensis HTE831
 
Paenibacillus sp. JDR-2

Gene: Pjdr2_1951: Methylmalonate-semialdehyde dehydrogenase (EC 1.2.1.27)
Methylmalonate-semialdehyde dehydrogenase (EC 1.2.1.27)
iolJ
 
Bacillus subtilis subsp. subtilis str. 168

Gene: BSU39670: 5-keto-2-deoxy-D-gluconate-6 phosphate aldolase (EC 4.1.2.29)
 
Bacillus amyloliquefaciens FZB42

Gene: RBAM_036690: 5-keto-2-deoxy-D-gluconate-6 phosphate aldolase (EC 4.1.2.29)
 
Bacillus pumilus SAFR-032
 
Bacillus licheniformis DSM 13

Gene: BLi04242: 5-keto-2-deoxy-D-gluconate-6 phosphate aldolase (EC 4.1.2.29)
 
Anoxybacillus flavithermus WK1
 
Geobacillus kaustophilus HTA426

Gene: GK1886: 5-keto-2-deoxy-D-gluconate-6 phosphate aldolase (EC 4.1.2.29)
 
Bacillus cereus ATCC 14579
 
Bacillus halodurans C-125

Gene: BH2314: 5-keto-2-deoxy-D-gluconate-6 phosphate aldolase (EC 4.1.2.29)
 
Bacillus clausii KSM-K16

Gene: ABC0428: 5-keto-2-deoxy-D-gluconate-6 phosphate aldolase (EC 4.1.2.29)
 
Oceanobacillus iheyensis HTE831
 
Paenibacillus sp. JDR-2
5-keto-2-deoxy-D-gluconate-6 phosphate aldolase (EC 4.1.2.29)
yrbE
*
Bacillus subtilis subsp. subtilis str. 168

Site:
position = -38
score = 4.63434
sequence = ATAAAGCGCTTTCG

Gene: BSU27770: Predicted inositol derivative dehydrogenase
 
Bacillus amyloliquefaciens FZB42
 
Bacillus pumilus SAFR-032
 
Bacillus licheniformis DSM 13
 
Anoxybacillus flavithermus WK1
 
Geobacillus kaustophilus HTA426
 
Bacillus cereus ATCC 14579
 
Bacillus halodurans C-125

Gene: BH2221: Predicted inositol derivative dehydrogenase
 
Bacillus clausii KSM-K16
 
Oceanobacillus iheyensis HTE831
 
Paenibacillus sp. JDR-2

Gene: Pjdr2_1952: Predicted inositol derivative dehydrogenase
Predicted inositol derivative dehydrogenase
iolR1
 
Bacillus subtilis subsp. subtilis str. 168

Gene: BSU10840: Transcriptional regulator of inositol utilization, LacI family
 
Bacillus amyloliquefaciens FZB42
 
Bacillus pumilus SAFR-032
 
Bacillus licheniformis DSM 13

Gene: BLi01180: Transcriptional regulator of inositol utilization, LacI family
 
Anoxybacillus flavithermus WK1
 
Geobacillus kaustophilus HTA426

Gene: GK1901: Transcriptional regulator of inositol utilization, LacI family
 
Bacillus cereus ATCC 14579
 
Bacillus halodurans C-125

Gene: BH2219: Transcriptional regulator of inositol utilization, LacI family
 
Bacillus clausii KSM-K16
 
Oceanobacillus iheyensis HTE831
 
Paenibacillus sp. JDR-2

Gene: Pjdr2_1954: Transcriptional regulator of inositol utilization, LacI family
Transcriptional regulator of inositol utilization, LacI family
BH2222
 
Bacillus subtilis subsp. subtilis str. 168
 
Bacillus amyloliquefaciens FZB42
 
Bacillus pumilus SAFR-032
 
Bacillus licheniformis DSM 13

Gene: BLi02212: Na+:myo-inositol cotransporter
 
Anoxybacillus flavithermus WK1
 
Geobacillus kaustophilus HTA426
 
Bacillus cereus ATCC 14579
*
Bacillus halodurans C-125

Site:
position = -118
score = 5.3419
sequence = GGAAAGCGCTTACT

Site:
position = -39
score = 4.97551
sequence = GTTAAGCGCTTAAC

Gene: BH2222: Na+:myo-inositol cotransporter
 
Bacillus clausii KSM-K16

Gene: ABC0430: Na+:myo-inositol cotransporter
 
Oceanobacillus iheyensis HTE831
 
Paenibacillus sp. JDR-2
Na+:myo-inositol cotransporter
BH0710
 
Bacillus subtilis subsp. subtilis str. 168
 
Bacillus amyloliquefaciens FZB42
 
Bacillus pumilus SAFR-032
 
Bacillus licheniformis DSM 13
 
Anoxybacillus flavithermus WK1
 
Geobacillus kaustophilus HTA426

Gene: GK1898: Predicted inositol derivative dehydrogenase
 
Bacillus cereus ATCC 14579
 
Bacillus halodurans C-125

Gene: BH2220: Predicted inositol derivative dehydrogenase
 
Bacillus clausii KSM-K16

Gene: ABC0577: Predicted inositol derivative dehydrogenase
 
Oceanobacillus iheyensis HTE831
 
Paenibacillus sp. JDR-2

Gene: Pjdr2_1117: Predicted inositol derivative dehydrogenase
Predicted inositol derivative dehydrogenase
BC4668
 
Bacillus subtilis subsp. subtilis str. 168
 
Bacillus amyloliquefaciens FZB42
 
Bacillus pumilus SAFR-032
 
Bacillus licheniformis DSM 13
 
Anoxybacillus flavithermus WK1
*
Geobacillus kaustophilus HTA426

Site:
position = -44
score = 4.88717
sequence = AGAAAGCGCTTCCC

Site:
position = -129
score = 5.14294
sequence = GGAAAGCGCTTGCT

Gene: GK1899: Predicted inositol derivative dehydrogenase
 
Bacillus cereus ATCC 14579
 
Bacillus halodurans C-125
 
Bacillus clausii KSM-K16
 
Oceanobacillus iheyensis HTE831
 
Paenibacillus sp. JDR-2
Predicted inositol derivative dehydrogenase
iolX
*
Bacillus subtilis subsp. subtilis str. 168

Site:
position = -112
score = 4.54116
sequence = AGAAAGCGCTTGCG

Site:
position = -53
score = 5.01559
sequence = AGAAAACGCTTTCT

Gene: BSU10850: Scyllo-inositol 2-dehydrogenase like (EC 1.1.1.-)
 
Bacillus amyloliquefaciens FZB42
 
Bacillus pumilus SAFR-032
*
Bacillus licheniformis DSM 13

Site:
position = -59
score = 4.96947
sequence = AGCAAGCGCTTTCT

Site:
position = -137
score = 4.61934
sequence = AGCAAGCGCTTGAC

Site:
position = -38
score = 4.63434
sequence = ATAAAGCGCTTTCA

Gene: BLi01181: Scyllo-inositol 2-dehydrogenase like (EC 1.1.1.-)
 
Anoxybacillus flavithermus WK1
 
Geobacillus kaustophilus HTA426

Gene: GK1897: Scyllo-inositol 2-dehydrogenase like (EC 1.1.1.-)
 
Bacillus cereus ATCC 14579
 
Bacillus halodurans C-125
 
Bacillus clausii KSM-K16

Gene: ABC0429: Scyllo-inositol 2-dehydrogenase like (EC 1.1.1.-)
 
Oceanobacillus iheyensis HTE831
 
Paenibacillus sp. JDR-2
Scyllo-inositol 2-dehydrogenase like (EC 1.1.1.-)
BH3901
 
Bacillus subtilis subsp. subtilis str. 168
 
Bacillus amyloliquefaciens FZB42
 
Bacillus pumilus SAFR-032
 
Bacillus licheniformis DSM 13
 
Anoxybacillus flavithermus WK1
 
Geobacillus kaustophilus HTA426

Gene: GK1896: Inositol transport system sugar-binding protein
 
Bacillus cereus ATCC 14579
*
Bacillus halodurans C-125

Site:
position = -127
score = 5.12669
sequence = AGAAAGCGCTTAAC

Gene: BH3901: Inositol transport system sugar-binding protein
 
Bacillus clausii KSM-K16
 
Oceanobacillus iheyensis HTE831
 
Paenibacillus sp. JDR-2
Inositol transport system sugar-binding protein
BH3900
 
Bacillus subtilis subsp. subtilis str. 168
 
Bacillus amyloliquefaciens FZB42
 
Bacillus pumilus SAFR-032
 
Bacillus licheniformis DSM 13
 
Anoxybacillus flavithermus WK1
 
Geobacillus kaustophilus HTA426
 
Bacillus cereus ATCC 14579
 
Bacillus halodurans C-125

Gene: BH3900: Methyl-accepting chemotaxis protein
 
Bacillus clausii KSM-K16
 
Oceanobacillus iheyensis HTE831
 
Paenibacillus sp. JDR-2
Methyl-accepting chemotaxis protein
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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