Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog Desal_2066 - Desulfovibrionales

Properties
Regulator type: Transcription factor
Regulator family: CRP
Regulation mode:
Biological process:
Effector:
Phylum: Proteobacteria/delta
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 6 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Desulfovibrio vulgaris Hildenborough
Desulfovibrio vulgaris str. Miyazaki F
Desulfovibrio desulfuricans G20
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774
Desulfovibrio piger ATCC 29098
Desulfovibrio salexigens DSM 2638 2 2
Desulfovibrio magneticus RS-1 3 2
Lawsonia intracellularis PHE/MN1-00
Desulfomicrobium baculatum DSM 4028
Desulfohalobium retbaense DSM 5692 2 2
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
DMR_38640
 
Desulfovibrio vulgaris Hildenborough
 
Desulfovibrio vulgaris str. Miyazaki F
 
Desulfovibrio desulfuricans G20
 
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774
 
Desulfovibrio piger ATCC 29098
*
Desulfovibrio salexigens DSM 2638

Site:
position = -40
score = 6.18918
sequence = CATTGATCTCGATCAACA

Gene: Desal_2066: transcriptional regulator, Crp/Fnr family
*
Desulfovibrio magneticus RS-1

Site:
position = -87
score = 6.34392
sequence = CATTGATGTGGATCAACG

Gene: DMR_38640: transcriptional regulator, Crp/Fnr family
 
Lawsonia intracellularis PHE/MN1-00
 
Desulfomicrobium baculatum DSM 4028
*
Desulfohalobium retbaense DSM 5692

Site:
position = -85
score = 6.10594
sequence = CATTGATGCAGATCAAGG

Gene: Dret_1643: transcriptional regulator, Crp/Fnr family
transcriptional regulator, Crp/Fnr family
 
CRON 2.
Desal_2272
 
Desulfovibrio vulgaris Hildenborough
 
Desulfovibrio vulgaris str. Miyazaki F
 
Desulfovibrio desulfuricans G20
 
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774
 
Desulfovibrio piger ATCC 29098
*
Desulfovibrio salexigens DSM 2638

Site:
position = -97
score = 6.41613
sequence = CGTTGATCTGGATCAATG

Gene: Desal_2272: FAD-dependent pyridine nucleotide-disulphide oxidoreductase
 
Desulfovibrio magneticus RS-1

Gene: DMR_26230: FAD-dependent pyridine nucleotide-disulphide oxidoreductase
 
Lawsonia intracellularis PHE/MN1-00
 
Desulfomicrobium baculatum DSM 4028
*
Desulfohalobium retbaense DSM 5692

Site:
position = -305
score = 6.30364
sequence = CATTGATCTCAATCAATG

Gene: Dret_2254: FAD-dependent pyridine nucleotide-disulphide oxidoreductase
FAD-dependent pyridine nucleotide-disulphide oxidoreductase
 
CRON 3.
DMR_38630
 
Desulfovibrio vulgaris Hildenborough

Gene: DVU3143: 4Fe-4S ferredoxin iron-sulfur binding domain protein
 
Desulfovibrio vulgaris str. Miyazaki F

Gene: DvMF_1693: 4Fe-4S ferredoxin iron-sulfur binding domain protein
 
Desulfovibrio desulfuricans G20

Gene: Dde_0657: 4Fe-4S ferredoxin iron-sulfur binding domain protein
 2
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774

Gene: Ddes_0544: 4Fe-4S ferredoxin iron-sulfur binding domain protein

Gene: Ddes_2065: 4Fe-4S ferredoxin iron-sulfur binding domain protein
 
Desulfovibrio piger ATCC 29098

Gene: DESPIG_02228: 4Fe-4S ferredoxin iron-sulfur binding domain protein
 
Desulfovibrio salexigens DSM 2638

Gene: Desal_0829: 4Fe-4S ferredoxin iron-sulfur binding domain protein
*
Desulfovibrio magneticus RS-1

Site:
position = -82
score = 6.05265
sequence = CGTTGATCCACATCAATG

Gene: DMR_38630: 4Fe-4S ferredoxin iron-sulfur binding domain protein
 
Lawsonia intracellularis PHE/MN1-00
 
Desulfomicrobium baculatum DSM 4028

Gene: Dbac_1361: 4Fe-4S ferredoxin iron-sulfur binding domain protein
 
Desulfohalobium retbaense DSM 5692

Gene: Dret_0164: 4Fe-4S ferredoxin iron-sulfur binding domain protein
4Fe-4S ferredoxin iron-sulfur binding domain protein
DMR_38620
 
Desulfovibrio vulgaris Hildenborough
 
Desulfovibrio vulgaris str. Miyazaki F
 
Desulfovibrio desulfuricans G20

Gene: Dde_0656: iron-sulfur cluster-binding protein
 
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774

Gene: Ddes_2066: iron-sulfur cluster-binding protein
 
Desulfovibrio piger ATCC 29098

Gene: DESPIG_02229: iron-sulfur cluster-binding protein
 
Desulfovibrio salexigens DSM 2638

Gene: Desal_0830: iron-sulfur cluster-binding protein
 
Desulfovibrio magneticus RS-1

Gene: DMR_38620: iron-sulfur cluster-binding protein
 
Lawsonia intracellularis PHE/MN1-00
 
Desulfomicrobium baculatum DSM 4028

Gene: Dbac_1360: iron-sulfur cluster-binding protein
 
Desulfohalobium retbaense DSM 5692

Gene: Dret_0165: iron-sulfur cluster-binding protein
iron-sulfur cluster-binding protein
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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