Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog CssR - Bacillales

Properties
Regulator type: Transcription factor
Regulator family: OmpR
Regulation mode: activator
Biological process: Protein secretion stress response
Effector: CssS, sensor histidine kinase
Phylum: Firmicutes
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 25 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Bacillus subtilis subsp. subtilis str. 168 4 3
Bacillus amyloliquefaciens FZB42 4 3
Bacillus pumilus SAFR-032 4 3
Bacillus licheniformis DSM 13 4 3
Anoxybacillus flavithermus WK1
Geobacillus kaustophilus HTA426
Bacillus cereus ATCC 14579
Bacillus halodurans C-125
Bacillus clausii KSM-K16
Oceanobacillus iheyensis HTE831 3 2
Paenibacillus sp. JDR-2
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
htrB
*
Bacillus subtilis subsp. subtilis str. 168

Site:
position = -200
score = 6.39995
sequence = TTTTCATT-(1)-TTATCCCA

Site:
position = -221
score = 8.48492
sequence = TTTTCATA-(0)-ATTTCACA

Gene: BSU33000: Serine protease, DegP/HtrA, do-like (EC 3.4.21.-)
*
Bacillus amyloliquefaciens FZB42

Site:
position = -200
score = 6.39995
sequence = TTTTCATT-(1)-TTATCCCA

Site:
position = -221
score = 8.48492
sequence = TTTTCATA-(0)-ATTTCACA

Gene: RBAM_030110: Serine protease, DegP/HtrA, do-like (EC 3.4.21.-)
*
Bacillus pumilus SAFR-032

Site:
position = -122
score = 6.2324
sequence = ATTATATA-(0)-ATTTGACA

Gene: BPUM_2952: Serine protease, DegP/HtrA, do-like (EC 3.4.21.-)
*
Bacillus licheniformis DSM 13

Site:
position = -161
score = 6.39995
sequence = TTTTCATT-(1)-TTATCCCA

Site:
position = -182
score = 8.48492
sequence = TTTTCATA-(0)-ATTTCACA

Gene: BLi03481: Serine protease, DegP/HtrA, do-like (EC 3.4.21.-)
 
Anoxybacillus flavithermus WK1
 
Geobacillus kaustophilus HTA426
 
Bacillus cereus ATCC 14579

Gene: BC5458: Serine protease, DegP/HtrA, do-like (EC 3.4.21.-)
 
Bacillus halodurans C-125

Gene: BH4022: Serine protease, DegP/HtrA, do-like (EC 3.4.21.-)
 
Bacillus clausii KSM-K16

Gene: ABC4094: Serine protease, DegP/HtrA, do-like (EC 3.4.21.-)
*
Oceanobacillus iheyensis HTE831

Site:
position = -88
score = 6.77016
sequence = ATTACACA-(1)-TTTTTCCA

Gene: OB0583: Serine protease, DegP/HtrA, do-like (EC 3.4.21.-)
 
Paenibacillus sp. JDR-2
Serine protease, DegP/HtrA, do-like (EC 3.4.21.-)
 
CRON 2.
htrA
*
Bacillus subtilis subsp. subtilis str. 168

Site:
position = -99
score = 6.39995
sequence = TTTTCATT-(1)-TTATCCCA

Site:
position = -120
score = 8.48492
sequence = TTTTCACA-(0)-ATTTCCCA

Gene: BSU12900: Serine protease, DegP/HtrA, do-like (EC 3.4.21.-)
*
Bacillus amyloliquefaciens FZB42

Site:
position = -90
score = 6.39995
sequence = TTTTCATT-(1)-TTATCCCA

Site:
position = -111
score = 8.48492
sequence = TTTTCACA-(0)-ATTTCCCA

Gene: RBAM_012750: Serine protease, DegP/HtrA, do-like (EC 3.4.21.-)
*
Bacillus pumilus SAFR-032

Site:
position = -100
score = 6.39995
sequence = TTTTCATT-(1)-TTATCCCA

Site:
position = -121
score = 7.63701
sequence = TTTTAACA-(0)-ATTTCCCA

Gene: BPUM_1181: Serine protease, DegP/HtrA, do-like (EC 3.4.21.-)
*
Bacillus licheniformis DSM 13

Site:
position = -73
score = 6.39995
sequence = TTTTCATG-(1)-TTATCCCA

Site:
position = -94
score = 7.52716
sequence = CTTTGACA-(0)-ATTTCCCA

Gene: BLi01390: Serine protease, DegP/HtrA, do-like (EC 3.4.21.-)
 
Anoxybacillus flavithermus WK1
 
Geobacillus kaustophilus HTA426
 
Bacillus cereus ATCC 14579
 
Bacillus halodurans C-125
 
Bacillus clausii KSM-K16
 
Oceanobacillus iheyensis HTE831
 
Paenibacillus sp. JDR-2
Serine protease, DegP/HtrA, do-like (EC 3.4.21.-)
 
CRON 3.
cssR
*
Bacillus subtilis subsp. subtilis str. 168

Site:
position = -72
score = 1.11975
sequence = TGTGAAAT-(0)-TATGAAAA

Site:
position = -94
score = 0.352088
sequence = TGGGATAA-(1)-AATGAAAA

Gene: BSU33010: Two-component response regulator of protein secretion stress, OmpR family
*
Bacillus amyloliquefaciens FZB42

Site:
position = -71
score = 1.11975
sequence = TGTGAAAT-(0)-TATGAAAA

Site:
position = -93
score = 0.352088
sequence = TGGGATAA-(1)-AATGAAAA

Gene: RBAM_030120: Two-component response regulator of protein secretion stress, OmpR family
*
Bacillus pumilus SAFR-032

Site:
position = -84
score = 1.11975
sequence = TGTGAAAT-(0)-TGTGAAAA

Site:
position = -230
score = 0.252899
sequence = TGTCAAAT-(0)-TATATAAT

Gene: BPUM_2953: Two-component response regulator of protein secretion stress, OmpR family
*
Bacillus licheniformis DSM 13

Site:
position = -72
score = 1.11975
sequence = TGTGAAAT-(0)-TATGAAAA

Site:
position = -94
score = 0.352088
sequence = TGGGATAA-(1)-AATGAAAA

Gene: BLi03482: Two-component response regulator of protein secretion stress, OmpR family
 
Anoxybacillus flavithermus WK1
 
Geobacillus kaustophilus HTA426
 
Bacillus cereus ATCC 14579
 
Bacillus halodurans C-125
 
Bacillus clausii KSM-K16
*
Oceanobacillus iheyensis HTE831

Site:
position = -91
score = 0.252899
sequence = TGGAAAAA-(1)-TGTGTAAT

Gene: OB0584: Two-component response regulator of protein secretion stress, OmpR family
 
Paenibacillus sp. JDR-2
Two-component response regulator of protein secretion stress, OmpR family
cssS
 
Bacillus subtilis subsp. subtilis str. 168

Gene: BSU33020: Two-component sensor histidine kinase
 
Bacillus amyloliquefaciens FZB42

Gene: RBAM_030130: Two-component sensor histidine kinase
 
Bacillus pumilus SAFR-032

Gene: BPUM_2954: Two-component sensor histidine kinase
 
Bacillus licheniformis DSM 13

Gene: BLi03483: Two-component sensor histidine kinase
 
Anoxybacillus flavithermus WK1
 
Geobacillus kaustophilus HTA426
 
Bacillus cereus ATCC 14579
 
Bacillus halodurans C-125
 
Bacillus clausii KSM-K16
 
Oceanobacillus iheyensis HTE831

Gene: OB0585: Two-component sensor histidine kinase
 
Paenibacillus sp. JDR-2
Two-component sensor histidine kinase
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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