Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog DesR - Bacillales

Properties
Regulator type: Transcription factor
Regulator family: LuxR
Regulation mode: repressor
Biological process: Cold shock response
Effector:
Phylum: Firmicutes
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 6 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Bacillus subtilis subsp. subtilis str. 168 3 1
Bacillus amyloliquefaciens FZB42 3 1
Bacillus pumilus SAFR-032 3 1
Bacillus licheniformis DSM 13 3 1
Anoxybacillus flavithermus WK1
Geobacillus kaustophilus HTA426
Bacillus cereus ATCC 14579
Bacillus halodurans C-125
Bacillus clausii KSM-K16 3 1
Oceanobacillus iheyensis HTE831 1 1
Paenibacillus sp. JDR-2
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
des
*
Bacillus subtilis subsp. subtilis str. 168

Site:
position = -99
score = 7.855
sequence = ATGACAA-(0)-ATGTCAT

Gene: BSU19180: Fatty-acid desaturase (EC 1.14.99.-)
*
Bacillus amyloliquefaciens FZB42

Site:
position = -101
score = 7.855
sequence = ATGACAA-(0)-ATGTCAT

Gene: RBAM_036870: Fatty-acid desaturase (EC 1.14.99.-)
*
Bacillus pumilus SAFR-032

Site:
position = -102
score = 7.855
sequence = ATGACAA-(0)-ATGTCAT

Gene: BPUM_2588: Fatty-acid desaturase (EC 1.14.99.-)
*
Bacillus licheniformis DSM 13

Site:
position = -102
score = 7.55858
sequence = ATGACAA-(0)-GTGTCAT

Gene: BLi02807: Fatty-acid desaturase (EC 1.14.99.-)
 
Anoxybacillus flavithermus WK1
 
Geobacillus kaustophilus HTA426
 
Bacillus cereus ATCC 14579
 
Bacillus halodurans C-125
*
Bacillus clausii KSM-K16

Site:
position = -98
score = 7.02844
sequence = ATGACAT-(0)-TTGTCAT

Gene: ABC0734: Fatty-acid desaturase (EC 1.14.99.-)
*
Oceanobacillus iheyensis HTE831

Site:
position = -99
score = 7.855
sequence = ATGACAA-(0)-ATGTCAT

Gene: OB2852: Fatty-acid desaturase (EC 1.14.99.-)
 
Paenibacillus sp. JDR-2
Fatty-acid desaturase (EC 1.14.99.-)
desK
 
Bacillus subtilis subsp. subtilis str. 168

Gene: BSU19190: Two-component sensor histidine kinase
 
Bacillus amyloliquefaciens FZB42

Gene: RBAM_036860: Two-component sensor histidine kinase
 
Bacillus pumilus SAFR-032

Gene: BPUM_2589: Two-component sensor histidine kinase
 
Bacillus licheniformis DSM 13

Gene: BLi02808: Two-component sensor histidine kinase
 
Anoxybacillus flavithermus WK1
 
Geobacillus kaustophilus HTA426
 
Bacillus cereus ATCC 14579
 
Bacillus halodurans C-125
 
Bacillus clausii KSM-K16

Gene: ABC0735: Two-component sensor histidine kinase
 
Oceanobacillus iheyensis HTE831

Gene: OB2851: Two-component sensor histidine kinase
 
Paenibacillus sp. JDR-2
Two-component sensor histidine kinase
desR
 
Bacillus subtilis subsp. subtilis str. 168

Gene: BSU19200: Two-component response regulator of cold shock, OmpR family
 
Bacillus amyloliquefaciens FZB42

Gene: RBAM_036850: Two-component response regulator of cold shock, OmpR family
 
Bacillus pumilus SAFR-032

Gene: BPUM_2590: Two-component response regulator of cold shock, OmpR family
 
Bacillus licheniformis DSM 13

Gene: BLi02809: Two-component response regulator of cold shock, OmpR family
 
Anoxybacillus flavithermus WK1
 
Geobacillus kaustophilus HTA426
 
Bacillus cereus ATCC 14579
 
Bacillus halodurans C-125
 
Bacillus clausii KSM-K16

Gene: ABC0736: Two-component response regulator of cold shock, OmpR family
 
Oceanobacillus iheyensis HTE831

Gene: OB2850: Two-component response regulator of cold shock, OmpR family
 
Paenibacillus sp. JDR-2
Two-component response regulator of cold shock, OmpR family
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD