Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog Crp - Cyanobacteria

Properties
Regulator type: Transcription factor
Regulator family: CRP
Regulation mode: repressor (activator)
Biological process:
Effector: Cyclic 3',5'-AMP
Phylum: Cyanobacteria
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 106 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Synechococcus sp. PCC 7002 6 5
Synechocystis sp. PCC 6803 14 12
Cyanothece sp. ATCC 51142 23 16
Cyanothece sp. PCC 8801 21 16
Cyanothece sp. PCC 7425 13 10
Microcystis aeruginosa NIES-843 6 6
Nostoc sp. PCC 7120 17 10
Trichodesmium erythraeum IMS101 16 12
Synechococcus elongatus PCC 7942 2 2
Prochlorococcus marinus str. MIT 9313 3 3
Synechococcus sp. JA-3-3Ab 4 3
Synechococcus sp. WH 8102 1 1
Gloeobacter violaceus PCC 7421
Thermosynechococcus elongatus BP-1 6 5
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
coxB
 
Synechococcus sp. PCC 7002

Gene: SYNPCC7002_A1162: Cytochrome c oxidase subunit 2 (EC 1.9.3.1)
 
Synechocystis sp. PCC 6803

Gene: slr1136: Cytochrome c oxidase subunit 2 (EC 1.9.3.1)
*
Cyanothece sp. ATCC 51142

Site:
position = -78
score = 3.73328
sequence = TGTGATAAAAAAGCCA

Gene: cce_1977: Cytochrome c oxidase subunit 2 (EC 1.9.3.1)
 
Cyanothece sp. PCC 8801

Gene: PCC8801_0567: Cytochrome c oxidase subunit 2 (EC 1.9.3.1)
 2
Cyanothece sp. PCC 7425

Gene: Cyan7425_1211: Cytochrome c oxidase subunit 2 (EC 1.9.3.1)

Gene: Cyan7425_3958: Cytochrome c oxidase subunit 2 (EC 1.9.3.1)
 
Microcystis aeruginosa NIES-843

Gene: MAE_22930: Cytochrome c oxidase subunit 2 (EC 1.9.3.1)
*2
Nostoc sp. PCC 7120

Gene: alr0950: Cytochrome c oxidase subunit 2 (EC 1.9.3.1)

Site:
position = -222
score = 3.0999
sequence = TCTGGAATAATTCCCC

Gene: alr2514: Cytochrome c oxidase subunit 2 (EC 1.9.3.1)
*
Trichodesmium erythraeum IMS101

Site:
position = -193
score = 3.98704
sequence = TGTAACCTAAAACAAA

Site:
position = -93
score = 3.88004
sequence = TCTGAGAAATATCAAA

Gene: Tery_1779: Cytochrome c oxidase subunit 2 (EC 1.9.3.1)
 
Synechococcus elongatus PCC 7942

Gene: Synpcc7942_2602: Cytochrome c oxidase subunit 2 (EC 1.9.3.1)
 
Prochlorococcus marinus str. MIT 9313

Gene: PMT1341: Cytochrome c oxidase subunit 2 (EC 1.9.3.1)
 
Synechococcus sp. JA-3-3Ab

Gene: CYA_1514: Cytochrome c oxidase subunit 2 (EC 1.9.3.1)
 
Synechococcus sp. WH 8102

Gene: SYNW1861: Cytochrome c oxidase subunit 2 (EC 1.9.3.1)
 
Gloeobacter violaceus PCC 7421

Gene: gvip300: Cytochrome c oxidase subunit 2 (EC 1.9.3.1)
 
Thermosynechococcus elongatus BP-1

Gene: null: Cytochrome c oxidase subunit 2 (EC 1.9.3.1)
Cytochrome c oxidase subunit 2 (EC 1.9.3.1)
coxA
 
Synechococcus sp. PCC 7002

Gene: SYNPCC7002_A1163: Cytochrome c oxidase subunit 1 (EC 1.9.3.1)
 
Synechocystis sp. PCC 6803

Gene: slr1137: Cytochrome c oxidase subunit 1 (EC 1.9.3.1)
 
Cyanothece sp. ATCC 51142

Gene: cce_1976: Cytochrome c oxidase subunit 1 (EC 1.9.3.1)
 
Cyanothece sp. PCC 8801

Gene: PCC8801_0568: Cytochrome c oxidase subunit 1 (EC 1.9.3.1)
 2
Cyanothece sp. PCC 7425

Gene: Cyan7425_1212: Cytochrome c oxidase subunit 1 (EC 1.9.3.1)

Gene: Cyan7425_3957: Cytochrome c oxidase subunit 1 (EC 1.9.3.1)
 
Microcystis aeruginosa NIES-843

Gene: MAE_22940: Cytochrome c oxidase subunit 1 (EC 1.9.3.1)
 2
Nostoc sp. PCC 7120

Gene: alr0951: Cytochrome c oxidase subunit 1 (EC 1.9.3.1)

Gene: alr2515: Cytochrome c oxidase subunit 1 (EC 1.9.3.1)
 
Trichodesmium erythraeum IMS101

Gene: Tery_1778: Cytochrome c oxidase subunit 1 (EC 1.9.3.1)
 
Synechococcus elongatus PCC 7942

Gene: Synpcc7942_2603: Cytochrome c oxidase subunit 1 (EC 1.9.3.1)
 
Prochlorococcus marinus str. MIT 9313

Gene: PMT1342: Cytochrome c oxidase subunit 1 (EC 1.9.3.1)
 
Synechococcus sp. JA-3-3Ab

Gene: CYA_1513: Cytochrome c oxidase subunit 1 (EC 1.9.3.1)
 
Synechococcus sp. WH 8102

Gene: SYNW1862: Cytochrome c oxidase subunit 1 (EC 1.9.3.1)
 
Gloeobacter violaceus PCC 7421

Gene: gvip299: Cytochrome c oxidase subunit 1 (EC 1.9.3.1)
 
Thermosynechococcus elongatus BP-1

Gene: null: Cytochrome c oxidase subunit 1 (EC 1.9.3.1)
Cytochrome c oxidase subunit 1 (EC 1.9.3.1)
coxC
 
Synechococcus sp. PCC 7002

Gene: SYNPCC7002_A1164: Cytochrome c oxidase subunit 3 (EC 1.9.3.1)
 
Synechocystis sp. PCC 6803

Gene: slr1138: Cytochrome c oxidase subunit 3 (EC 1.9.3.1)
 
Cyanothece sp. ATCC 51142

Gene: cce_1975: Cytochrome c oxidase subunit 3 (EC 1.9.3.1)
 
Cyanothece sp. PCC 8801

Gene: PCC8801_0569: Cytochrome c oxidase subunit 3 (EC 1.9.3.1)
 2
Cyanothece sp. PCC 7425

Gene: Cyan7425_1213: Cytochrome c oxidase subunit 3 (EC 1.9.3.1)

Gene: Cyan7425_3956: Cytochrome c oxidase subunit 3 (EC 1.9.3.1)
 
Microcystis aeruginosa NIES-843

Gene: MAE_22950: Cytochrome c oxidase subunit 3 (EC 1.9.3.1)
 
Nostoc sp. PCC 7120

Gene: alr2516: Cytochrome c oxidase subunit 3 (EC 1.9.3.1)
 
Trichodesmium erythraeum IMS101

Gene: Tery_1777: Cytochrome c oxidase subunit 3 (EC 1.9.3.1)
 
Synechococcus elongatus PCC 7942

Gene: Synpcc7942_2604: Cytochrome c oxidase subunit 3 (EC 1.9.3.1)
 
Prochlorococcus marinus str. MIT 9313

Gene: PMT1343: Cytochrome c oxidase subunit 3 (EC 1.9.3.1)
 
Synechococcus sp. JA-3-3Ab

Gene: CYA_1512: Cytochrome c oxidase subunit 3 (EC 1.9.3.1)
 
Synechococcus sp. WH 8102

Gene: SYNW1863: Cytochrome c oxidase subunit 3 (EC 1.9.3.1)
 
Gloeobacter violaceus PCC 7421

Gene: gvip298: Cytochrome c oxidase subunit 3 (EC 1.9.3.1)
 
Thermosynechococcus elongatus BP-1

Gene: null: Cytochrome c oxidase subunit 3 (EC 1.9.3.1)
Cytochrome c oxidase subunit 3 (EC 1.9.3.1)
 
CRON 2.
SYNPCC7002_A0129
 
Synechococcus sp. PCC 7002

Gene: SYNPCC7002_A0129: Transcription regulator, AbrB family
 
Synechocystis sp. PCC 6803
 
Cyanothece sp. ATCC 51142
 
Cyanothece sp. PCC 8801
 
Cyanothece sp. PCC 7425
 
Microcystis aeruginosa NIES-843

Gene: MAE_35130: Transcription regulator, AbrB family
 
Nostoc sp. PCC 7120

Gene: all2080: Transcription regulator, AbrB family
 
Trichodesmium erythraeum IMS101

Gene: Tery_1859: Transcription regulator, AbrB family
*
Synechococcus elongatus PCC 7942

Site:
position = -1
score = 4.11762
sequence = AATGACATCAATCACG

Gene: Synpcc7942_1969: Transcription regulator, AbrB family
*
Prochlorococcus marinus str. MIT 9313

Site:
position = -222
score = 3.76819
sequence = AGTGATCAGAATGCCC

Gene: PMT0464: Transcription regulator, AbrB family
 
Synechococcus sp. JA-3-3Ab

Gene: CYA_0162: Transcription regulator, AbrB family
 
Synechococcus sp. WH 8102
 
Gloeobacter violaceus PCC 7421
*
Thermosynechococcus elongatus BP-1

Site:
position = -437
score = 4.16121
sequence = TGTGAGCATATTCAAC

Gene: null: Transcription regulator, AbrB family
Transcription regulator, AbrB family
 
CRON 3.
rlpA
 
Synechococcus sp. PCC 7002

Gene: SYNPCC7002_A0344: Predicted lipoprotein A
 
Synechocystis sp. PCC 6803

Gene: slr0423: Predicted lipoprotein A
*
Cyanothece sp. ATCC 51142

Site:
position = -215
score = 4.00951
sequence = TGTTAACTAGATCACA

Gene: cce_3687: Predicted lipoprotein A
*
Cyanothece sp. PCC 8801

Site:
position = -239
score = 3.83208
sequence = GGTGAAATTAGGCAAA

Gene: PCC8801_1079: Predicted lipoprotein A
*
Cyanothece sp. PCC 7425

Site:
position = -328
score = 4.21465
sequence = CGTGATTCGGATCACA

Gene: Cyan7425_3340: Predicted lipoprotein A
 
Microcystis aeruginosa NIES-843

Gene: MAE_42190: Predicted lipoprotein A
 
Nostoc sp. PCC 7120

Gene: alr2935: Predicted lipoprotein A
 
Trichodesmium erythraeum IMS101
 
Synechococcus elongatus PCC 7942

Gene: Synpcc7942_1152: Predicted lipoprotein A
 
Prochlorococcus marinus str. MIT 9313

Gene: PMT1690: Predicted lipoprotein A
 
Synechococcus sp. JA-3-3Ab

Gene: CYA_2884: Predicted lipoprotein A
 
Synechococcus sp. WH 8102

Gene: SYNW2028: Predicted lipoprotein A
 
Gloeobacter violaceus PCC 7421

Gene: glr1148: Predicted lipoprotein A
*
Thermosynechococcus elongatus BP-1

Site:
position = -317
score = 4.80335
sequence = GGTGATCTGAGTCACA

Gene: tlr0333: Predicted lipoprotein A
Predicted lipoprotein A
 
CRON 4.
ackA
 
Synechococcus sp. PCC 7002
 
Synechocystis sp. PCC 6803

Gene: sll1299: Acetate kinase (EC 2.7.2.1)
*2
Cyanothece sp. ATCC 51142

Site:
position = -23
score = 3.59212
sequence = CATGATTTTATTCAGA

Gene: cce_0800: Acetate kinase (EC 2.7.2.1)

Gene: cce_5183: Acetate kinase (EC 2.7.2.1)
*
Cyanothece sp. PCC 8801

Site:
position = -203
score = 4.33407
sequence = GGTGACAGAAATCAAA

Gene: PCC8801_3887: Acetate kinase (EC 2.7.2.1)
 
Cyanothece sp. PCC 7425

Gene: Cyan7425_2207: Acetate kinase (EC 2.7.2.1)
*
Microcystis aeruginosa NIES-843

Site:
position = -44
score = 3.63095
sequence = TTTGATTATGATCGCC

Gene: MAE_02800: Acetate kinase (EC 2.7.2.1)
*
Nostoc sp. PCC 7120

Site:
position = -44
score = 4.38041
sequence = AATGATATAGCTCACA

Gene: all2561: Acetate kinase (EC 2.7.2.1)
 
Trichodesmium erythraeum IMS101
*
Synechococcus elongatus PCC 7942

Site:
position = -63
score = 4.24484
sequence = TGTGATTAAGCACACA

Gene: Synpcc7942_2079: Acetate kinase (EC 2.7.2.1)
 
Prochlorococcus marinus str. MIT 9313
 
Synechococcus sp. JA-3-3Ab

Gene: CYA_2688: Acetate kinase (EC 2.7.2.1)
 
Synechococcus sp. WH 8102

Gene: SYNW0155: Acetate kinase (EC 2.7.2.1)
 
Gloeobacter violaceus PCC 7421

Gene: glr1000: Acetate kinase (EC 2.7.2.1)
 
Thermosynechococcus elongatus BP-1

Gene: tlr2340: Acetate kinase (EC 2.7.2.1)
Acetate kinase (EC 2.7.2.1)
 
CRON 5.
chlA-II
 
Synechococcus sp. PCC 7002

Gene: SYNPCC7002_A1992: Magnesium-protoporphyrin IX monomethyl ester cyclase 2 (EC 1.14.13.81)
*
Synechocystis sp. PCC 6803

Site:
position = -403
score = 4.75912
sequence = TGTGAGAATAATCACA

Gene: sll1874: Magnesium-protoporphyrin IX monomethyl ester cyclase 2 (EC 1.14.13.81)
 
Cyanothece sp. ATCC 51142

Gene: cce_4412: Magnesium-protoporphyrin IX monomethyl ester cyclase 2 (EC 1.14.13.81)
*
Cyanothece sp. PCC 8801

Site:
position = -250
score = 4.30686
sequence = TTTGATTTAATTCAAC

Gene: PCC8801_3705: Magnesium-protoporphyrin IX monomethyl ester cyclase 2 (EC 1.14.13.81)
 
Cyanothece sp. PCC 7425

Gene: Cyan7425_4781: Magnesium-protoporphyrin IX monomethyl ester cyclase 2 (EC 1.14.13.81)
*
Microcystis aeruginosa NIES-843

Site:
position = -45
score = 3.69203
sequence = TATGTTTAAAATCCTA

Gene: MAE_46620: Magnesium-protoporphyrin IX monomethyl ester cyclase 2 (EC 1.14.13.81)
 2
Nostoc sp. PCC 7120

Gene: alr1358: Magnesium-protoporphyrin IX monomethyl ester cyclase 2 (EC 1.14.13.81)

Gene: all1880: Magnesium-protoporphyrin IX monomethyl ester cyclase 2 (EC 1.14.13.81)
 
Trichodesmium erythraeum IMS101
 
Synechococcus elongatus PCC 7942
 
Prochlorococcus marinus str. MIT 9313
 
Synechococcus sp. JA-3-3Ab
 
Synechococcus sp. WH 8102

Gene: SYNW1198: Magnesium-protoporphyrin IX monomethyl ester cyclase 2 (EC 1.14.13.81)
 
Gloeobacter violaceus PCC 7421
 
Thermosynechococcus elongatus BP-1

Gene: tlr1722: Magnesium-protoporphyrin IX monomethyl ester cyclase 2 (EC 1.14.13.81)
Magnesium-protoporphyrin IX monomethyl ester cyclase 2 (EC 1.14.13.81)
 
CRON 6.
crp
 
Synechococcus sp. PCC 7002

Gene: SYNPCC7002_A1789: cAMP responsive transcription regulator, Fnr-Crp family
*2
Synechocystis sp. PCC 6803

Site:
position = -159
score = 4.00871
sequence = AGTGAAAAAACTCACT

Gene: sll1371: cAMP responsive transcription regulator, Fnr-Crp family

Site:
position = -106
score = 4.46334
sequence = TGTGACAATAAACACC

Gene: sll1924: cAMP responsive transcription regulator, Fnr-Crp family
 
Cyanothece sp. ATCC 51142

Gene: cce_1423: cAMP responsive transcription regulator, Fnr-Crp family
 
Cyanothece sp. PCC 8801

Gene: PCC8801_0890: cAMP responsive transcription regulator, Fnr-Crp family
 
Cyanothece sp. PCC 7425

Gene: Cyan7425_1533: cAMP responsive transcription regulator, Fnr-Crp family
 
Microcystis aeruginosa NIES-843

Gene: MAE_49390: cAMP responsive transcription regulator, Fnr-Crp family
 
Nostoc sp. PCC 7120

Gene: alr0295: cAMP responsive transcription regulator, Fnr-Crp family
*
Trichodesmium erythraeum IMS101

Site:
position = -259
score = 4.15415
sequence = CATGATCAAAGTCAAG

Gene: Tery_1557: cAMP responsive transcription regulator, Fnr-Crp family
 
Synechococcus elongatus PCC 7942

Gene: Synpcc7942_1243: cAMP responsive transcription regulator, Fnr-Crp family
 
Prochlorococcus marinus str. MIT 9313

Gene: PMT2151: cAMP responsive transcription regulator, Fnr-Crp family
 
Synechococcus sp. JA-3-3Ab

Gene: CYA_1331: cAMP responsive transcription regulator, Fnr-Crp family
 
Synechococcus sp. WH 8102
 
Gloeobacter violaceus PCC 7421
 
Thermosynechococcus elongatus BP-1

Gene: null: cAMP responsive transcription regulator, Fnr-Crp family
cAMP responsive transcription regulator, Fnr-Crp family
sll1372
 
Synechococcus sp. PCC 7002

Gene: SYNPCC7002_A1790: Predicted membrane protein
 
Synechocystis sp. PCC 6803

Gene: sll1372: Predicted membrane protein
 
Cyanothece sp. ATCC 51142

Gene: cce_1422: Predicted membrane protein
 
Cyanothece sp. PCC 8801

Gene: PCC8801_0891: Predicted membrane protein
 
Cyanothece sp. PCC 7425

Gene: Cyan7425_0341: Predicted membrane protein
 
Microcystis aeruginosa NIES-843
 
Nostoc sp. PCC 7120

Gene: alr0296: Predicted membrane protein
 
Trichodesmium erythraeum IMS101

Gene: Tery_1556: Predicted membrane protein
 
Synechococcus elongatus PCC 7942

Gene: Synpcc7942_2269: Predicted membrane protein
 
Prochlorococcus marinus str. MIT 9313

Gene: PMT1351: Predicted membrane protein
 
Synechococcus sp. JA-3-3Ab

Gene: CYA_0813: Predicted membrane protein
 
Synechococcus sp. WH 8102

Gene: SYNW1870: Predicted membrane protein
 
Gloeobacter violaceus PCC 7421
 
Thermosynechococcus elongatus BP-1

Gene: tlr1402: Predicted membrane protein
Predicted membrane protein
 
CRON 7.
sigF
*
Synechococcus sp. PCC 7002

Site:
position = -223
score = 4.31142
sequence = TTTGATAAAAATCAAT

Gene: SYNPCC7002_A1924: RNA polymerase sigma-37
 
Synechocystis sp. PCC 6803

Gene: slr1564: RNA polymerase sigma-37
 
Cyanothece sp. ATCC 51142

Gene: cce_2566: RNA polymerase sigma-37
*
Cyanothece sp. PCC 8801

Site:
position = -271
score = 3.66906
sequence = AGTGACCTAAATTCCG

Gene: PCC8801_4329: RNA polymerase sigma-37
*
Cyanothece sp. PCC 7425

Site:
position = -91
score = 4.35814
sequence = TGTGTTCTAGATCACT

Gene: Cyan7425_3949: RNA polymerase sigma-37
 
Microcystis aeruginosa NIES-843

Gene: MAE_52920: RNA polymerase sigma-37
 
Nostoc sp. PCC 7120

Gene: all3853: RNA polymerase sigma-37
*
Trichodesmium erythraeum IMS101

Site:
position = -118
score = 4.05575
sequence = TGTGTTTGATATCACA

Gene: Tery_3916: RNA polymerase sigma-37
 
Synechococcus elongatus PCC 7942

Gene: Synpcc7942_1510: RNA polymerase sigma-37
 
Prochlorococcus marinus str. MIT 9313
 
Synechococcus sp. JA-3-3Ab

Gene: CYA_0597: RNA polymerase sigma-37
 
Synechococcus sp. WH 8102
 
Gloeobacter violaceus PCC 7421
*
Thermosynechococcus elongatus BP-1

Site:
position = -174
score = 4.66581
sequence = TGTGGTCAAGATCACA

Gene: null: RNA polymerase sigma-37
RNA polymerase sigma-37
 
CRON 8.
cupA
*
Synechococcus sp. PCC 7002

Site:
position = -300
score = 3.95983
sequence = CGTGATTTTGCTCAAC

Gene: SYNPCC7002_A0174: Carbon dioxide hydration protein
 
Synechocystis sp. PCC 6803

Gene: sll1734: Carbon dioxide hydration protein
 
Cyanothece sp. ATCC 51142

Gene: cce_0605: Carbon dioxide hydration protein
 
Cyanothece sp. PCC 8801

Gene: PCC8801_4250: Carbon dioxide hydration protein
*
Cyanothece sp. PCC 7425

Site:
position = -303
score = 4.67784
sequence = TGTGATTTTGATCAAC

Gene: Cyan7425_4859: Carbon dioxide hydration protein
*
Microcystis aeruginosa NIES-843

Site:
position = 5
score = 4.04709
sequence = TGGGACATTAATCAAA

Gene: MAE_15160: Carbon dioxide hydration protein
 
Nostoc sp. PCC 7120

Gene: alr4158: Carbon dioxide hydration protein
 
Trichodesmium erythraeum IMS101
 
Synechococcus elongatus PCC 7942

Gene: Synpcc7942_2093: Carbon dioxide hydration protein
 
Prochlorococcus marinus str. MIT 9313
*
Synechococcus sp. JA-3-3Ab

Site:
position = -325
score = 4.26414
sequence = TGTGATTTTGCTCAAC

Gene: CYA_0638: Carbon dioxide hydration protein
 
Synechococcus sp. WH 8102
 
Gloeobacter violaceus PCC 7421

Gene: gvip134: Carbon dioxide hydration protein
 
Thermosynechococcus elongatus BP-1

Gene: tlr0906: Carbon dioxide hydration protein
Carbon dioxide hydration protein
cupS
 
Synechococcus sp. PCC 7002

Gene: SYNPCC7002_A0175: Carbon dioxide uptake protein
 
Synechocystis sp. PCC 6803

Gene: sll1735: Carbon dioxide uptake protein
 
Cyanothece sp. ATCC 51142

Gene: cce_1049: Carbon dioxide uptake protein
*
Cyanothece sp. PCC 8801

Site:
position = -199
score = 4.20851
sequence = ACTGATTTAATTCACT

Gene: PCC8801_1006: Carbon dioxide uptake protein
 
Cyanothece sp. PCC 7425

Gene: Cyan7425_4858: Carbon dioxide uptake protein
 
Microcystis aeruginosa NIES-843

Gene: MAE_54040: Carbon dioxide uptake protein
*
Nostoc sp. PCC 7120

Site:
position = -62
score = 4.27783
sequence = TGTGATAAAAATTAAA

Site:
position = -141
score = 4.22746
sequence = TTTGATAATTATCATA

Gene: alr1320: Carbon dioxide uptake protein
 
Trichodesmium erythraeum IMS101
 
Synechococcus elongatus PCC 7942
 
Prochlorococcus marinus str. MIT 9313
 
Synechococcus sp. JA-3-3Ab

Gene: CYA_0636: Carbon dioxide uptake protein
 
Synechococcus sp. WH 8102
 
Gloeobacter violaceus PCC 7421

Gene: glr1006: Carbon dioxide uptake protein
 
Thermosynechococcus elongatus BP-1

Gene: null: Carbon dioxide uptake protein
Carbon dioxide uptake protein
 
CRON 9.
apcC
 
Synechococcus sp. PCC 7002

Gene: SYNPCC7002_A1928: Phycobilisome linker polypeptide, allophycocyanin-associated
 
Synechocystis sp. PCC 6803

Gene: ssr3383: Phycobilisome linker polypeptide, allophycocyanin-associated
*
Cyanothece sp. ATCC 51142

Site:
position = 5
score = 4.05882
sequence = AATGTTTAAAGTCACC

Gene: cce_2911: Phycobilisome linker polypeptide, allophycocyanin-associated
*
Cyanothece sp. PCC 8801

Site:
position = 5
score = 3.87731
sequence = GATGTTTAAAGTCACC

Gene: PCC8801_2788: Phycobilisome linker polypeptide, allophycocyanin-associated
 
Cyanothece sp. PCC 7425

Gene: Cyan7425_4996: Phycobilisome linker polypeptide, allophycocyanin-associated
*
Microcystis aeruginosa NIES-843

Site:
position = 5
score = 4.13621
sequence = GATGTTCAAAATCACC

Gene: MAE_10240: Phycobilisome linker polypeptide, allophycocyanin-associated
 
Nostoc sp. PCC 7120

Gene: asr0023: Phycobilisome linker polypeptide, allophycocyanin-associated
*
Trichodesmium erythraeum IMS101

Site:
position = 5
score = 4.15511
sequence = AATGTTTAAGATCACA

Gene: Tery_3647: Phycobilisome linker polypeptide, allophycocyanin-associated
 
Synechococcus elongatus PCC 7942

Gene: Synpcc7942_0325: Phycobilisome linker polypeptide, allophycocyanin-associated
 
Prochlorococcus marinus str. MIT 9313
*
Synechococcus sp. JA-3-3Ab

Site:
position = 5
score = 3.73248
sequence = CATGTTTAAGATCACG

Gene: CYA_2225: Phycobilisome linker polypeptide, allophycocyanin-associated
*
Synechococcus sp. WH 8102

Site:
position = 5
score = 3.92608
sequence = GTTGTTCAAAGTCACC

Gene: SYNW0483: Phycobilisome linker polypeptide, allophycocyanin-associated
 2
Gloeobacter violaceus PCC 7421

Gene: gvip184: Phycobilisome linker polypeptide, allophycocyanin-associated

Gene: gvip174: Phycobilisome linker polypeptide, allophycocyanin-associated
*
Thermosynechococcus elongatus BP-1

Site:
position = -233
score = 3.62587
sequence = CATGAAAGAAGTCACC

Gene: null: Phycobilisome linker polypeptide, allophycocyanin-associated
Phycobilisome linker polypeptide, allophycocyanin-associated
 
CRON 10.
sufR
 
Synechococcus sp. PCC 7002

Gene: SYNPCC7002_A1815: Iron-sulfur cluster biogenesis regulator, DeoR family
 
Synechocystis sp. PCC 6803

Gene: sll0088: Iron-sulfur cluster biogenesis regulator, DeoR family
*
Cyanothece sp. ATCC 51142

Site:
position = -95
score = 3.88898
sequence = TGTTGTCAAAGTCACA

Gene: cce_0683: Iron-sulfur cluster biogenesis regulator, DeoR family
*
Cyanothece sp. PCC 8801

Site:
position = -41
score = 3.82281
sequence = GTTGATTTAAGTCCTA

Gene: PCC8801_0414: Iron-sulfur cluster biogenesis regulator, DeoR family
 
Cyanothece sp. PCC 7425

Gene: Cyan7425_3451: Iron-sulfur cluster biogenesis regulator, DeoR family
*
Microcystis aeruginosa NIES-843

Site:
position = -128
score = 3.69999
sequence = TGTTGTCAAAGTCACG

Gene: MAE_23100: Iron-sulfur cluster biogenesis regulator, DeoR family
*
Nostoc sp. PCC 7120

Site:
position = -42
score = 3.66096
sequence = TGTTGTCAAAGTCAAA

Gene: all2491: Iron-sulfur cluster biogenesis regulator, DeoR family
 
Trichodesmium erythraeum IMS101

Gene: Tery_4354: Iron-sulfur cluster biogenesis regulator, DeoR family
 
Synechococcus elongatus PCC 7942

Gene: Synpcc7942_1733: Iron-sulfur cluster biogenesis regulator, DeoR family
*
Prochlorococcus marinus str. MIT 9313

Site:
position = -71
score = 3.87094
sequence = CCTGATCTAAGGCAAC

Gene: PMT1607: Iron-sulfur cluster biogenesis regulator, DeoR family
 
Synechococcus sp. JA-3-3Ab

Gene: CYA_2189: Iron-sulfur cluster biogenesis regulator, DeoR family
 
Synechococcus sp. WH 8102

Gene: SYNW0317: Iron-sulfur cluster biogenesis regulator, DeoR family
 
Gloeobacter violaceus PCC 7421
 
Thermosynechococcus elongatus BP-1

Gene: tlr0491: Iron-sulfur cluster biogenesis regulator, DeoR family
Iron-sulfur cluster biogenesis regulator, DeoR family
 
CRON 11.
SYNPCC7002_A0687
 
Synechococcus sp. PCC 7002

Gene: SYNPCC7002_A0687: Conserved hypothetical protein
*
Synechocystis sp. PCC 6803

Site:
position = -56
score = 4.09661
sequence = TTTGATCAAAGTCCTA

Gene: slr0013: Conserved hypothetical protein
*
Cyanothece sp. ATCC 51142

Site:
position = -137
score = 3.83478
sequence = TTTGACTTAAATAACC

Gene: cce_3288: Conserved hypothetical protein
*
Cyanothece sp. PCC 8801

Site:
position = -153
score = 3.78484
sequence = TTTGATCTCGATCATT

Gene: PCC8801_0091: Conserved hypothetical protein
 
Cyanothece sp. PCC 7425

Gene: Cyan7425_1612: Conserved hypothetical protein
 
Microcystis aeruginosa NIES-843

Gene: MAE_46800: Conserved hypothetical protein
 
Nostoc sp. PCC 7120

Gene: alr4373: Conserved hypothetical protein
 
Trichodesmium erythraeum IMS101

Gene: Tery_2251: Conserved hypothetical protein
 
Synechococcus elongatus PCC 7942

Gene: Synpcc7942_1932: Conserved hypothetical protein
*
Prochlorococcus marinus str. MIT 9313

Site:
position = 17
score = 3.74245
sequence = TTTGAAACAATTCACC

Gene: PMT0719: Conserved hypothetical protein
 
Synechococcus sp. JA-3-3Ab

Gene: CYA_1016: Conserved hypothetical protein
 
Synechococcus sp. WH 8102

Gene: SYNW1251: Conserved hypothetical protein
 
Gloeobacter violaceus PCC 7421

Gene: glr4266: Conserved hypothetical protein
 
Thermosynechococcus elongatus BP-1

Gene: tlr0729: Conserved hypothetical protein
Conserved hypothetical protein
 
CRON 12.
ppa
 
Synechococcus sp. PCC 7002

Gene: SYNPCC7002_A1228: inorganic pyrophosphatase
 
Synechocystis sp. PCC 6803

Gene: slr1622: inorganic pyrophosphatase
*
Cyanothece sp. ATCC 51142

Site:
position = -265
score = 4.5421
sequence = TGTGATTATTATCAAA

Site:
position = -104
score = 4.41084
sequence = TGTGATTATTATCAAC

Gene: cce_4329: inorganic pyrophosphatase
*
Cyanothece sp. PCC 8801

Site:
position = -177
score = 3.95437
sequence = TGTGATACTCATCATA

Gene: PCC8801_2042: inorganic pyrophosphatase
*
Cyanothece sp. PCC 7425

Site:
position = -273
score = 3.70376
sequence = ACTGATTAAGGGCACT

Gene: Cyan7425_1645: inorganic pyrophosphatase
 
Microcystis aeruginosa NIES-843

Gene: MAE_47020: inorganic pyrophosphatase
*
Nostoc sp. PCC 7120

Site:
position = -160
score = 3.71295
sequence = TGTGATATTTTTCCAC

Gene: all3570: inorganic pyrophosphatase
*
Trichodesmium erythraeum IMS101

Site:
position = -237
score = 3.91078
sequence = AATGATAGAGTTCACG

Gene: Tery_1519: inorganic pyrophosphatase
 
Synechococcus elongatus PCC 7942

Gene: Synpcc7942_1383: inorganic pyrophosphatase
 
Prochlorococcus marinus str. MIT 9313

Gene: PMT1257: inorganic pyrophosphatase
 
Synechococcus sp. JA-3-3Ab

Gene: CYA_0251: inorganic pyrophosphatase
 
Synechococcus sp. WH 8102

Gene: SYNW1769: inorganic pyrophosphatase
 
Gloeobacter violaceus PCC 7421

Gene: glr4227: inorganic pyrophosphatase
 
Thermosynechococcus elongatus BP-1

Gene: null: inorganic pyrophosphatase
inorganic pyrophosphatase
 
CRON 13.
nifX
 
Synechococcus sp. PCC 7002
 
Synechocystis sp. PCC 6803
 
Cyanothece sp. ATCC 51142

Gene: cce_0565: Nitrogen fixation protein
*
Cyanothece sp. PCC 8801

Site:
position = 21
score = 4.26022
sequence = AGTGACAATGTTCATA

Gene: PCC8801_1790: Nitrogen fixation protein
 
Cyanothece sp. PCC 7425

Gene: Cyan7425_4798: Nitrogen fixation protein
 
Microcystis aeruginosa NIES-843
*
Nostoc sp. PCC 7120

Site:
position = 21
score = 4.25267
sequence = AGTGACAGAATTCATA

Gene: all1436: Nitrogen fixation protein
*
Trichodesmium erythraeum IMS101

Site:
position = 21
score = 4.27724
sequence = ACTGATTTTATTCATA

Gene: Tery_4140: Nitrogen fixation protein
 
Synechococcus elongatus PCC 7942
 
Prochlorococcus marinus str. MIT 9313
 
Synechococcus sp. JA-3-3Ab
 
Synechococcus sp. WH 8102
 
Gloeobacter violaceus PCC 7421
 
Thermosynechococcus elongatus BP-1
Nitrogen fixation protein
nifK1
 
Synechococcus sp. PCC 7002
 
Synechocystis sp. PCC 6803
 
Cyanothece sp. ATCC 51142

Gene: cce_0566: Nitrogen fixation protein
 
Cyanothece sp. PCC 8801

Gene: PCC8801_1791: Nitrogen fixation protein
 
Cyanothece sp. PCC 7425

Gene: Cyan7425_4799: Nitrogen fixation protein
 
Microcystis aeruginosa NIES-843
 
Nostoc sp. PCC 7120

Gene: all1435: Nitrogen fixation protein
 
Trichodesmium erythraeum IMS101

Gene: Tery_4141: Nitrogen fixation protein
 
Synechococcus elongatus PCC 7942
 
Prochlorococcus marinus str. MIT 9313
 
Synechococcus sp. JA-3-3Ab

Gene: CYA_1837: Nitrogen fixation protein
 
Synechococcus sp. WH 8102
 
Gloeobacter violaceus PCC 7421
 
Thermosynechococcus elongatus BP-1
Nitrogen fixation protein
nifK2
 
Synechococcus sp. PCC 7002
 
Synechocystis sp. PCC 6803
*
Cyanothece sp. ATCC 51142

Site:
position = 12
score = 4.20535
sequence = ACTGATAATAATCCCA

Gene: cce_0567: Nitrogen fixation protein
 
Cyanothece sp. PCC 8801

Gene: PCC8801_1792: Nitrogen fixation protein
 
Cyanothece sp. PCC 7425

Gene: Cyan7425_4800: Nitrogen fixation protein
 
Microcystis aeruginosa NIES-843
 
Nostoc sp. PCC 7120

Gene: asl1434: Nitrogen fixation protein
 
Trichodesmium erythraeum IMS101
 
Synechococcus elongatus PCC 7942
 
Prochlorococcus marinus str. MIT 9313
 
Synechococcus sp. JA-3-3Ab

Gene: CYA_1838: Nitrogen fixation protein
 
Synechococcus sp. WH 8102
 
Gloeobacter violaceus PCC 7421
 
Thermosynechococcus elongatus BP-1
Nitrogen fixation protein
nifW
 
Synechococcus sp. PCC 7002
 
Synechocystis sp. PCC 6803
*
Cyanothece sp. ATCC 51142

Site:
position = -221
score = 4.20535
sequence = ACTGATAATAATCCCA

Site:
position = -53
score = 4.05683
sequence = CGTGAGTTAGATCAAC

Gene: cce_0568: Nitrogenase-stabilizing/protective protein
 
Cyanothece sp. PCC 8801

Gene: PCC8801_1793: Nitrogenase-stabilizing/protective protein
 
Cyanothece sp. PCC 7425

Gene: Cyan7425_4801: Nitrogenase-stabilizing/protective protein
 
Microcystis aeruginosa NIES-843
 
Nostoc sp. PCC 7120

Gene: all1433: Nitrogenase-stabilizing/protective protein
 
Trichodesmium erythraeum IMS101

Gene: Tery_4142: Nitrogenase-stabilizing/protective protein
 
Synechococcus elongatus PCC 7942
 
Prochlorococcus marinus str. MIT 9313
 
Synechococcus sp. JA-3-3Ab

Gene: CYA_1839: Nitrogenase-stabilizing/protective protein
 
Synechococcus sp. WH 8102
 
Gloeobacter violaceus PCC 7421
 
Thermosynechococcus elongatus BP-1
Nitrogenase-stabilizing/protective protein
hesA
 
Synechococcus sp. PCC 7002
 
Synechocystis sp. PCC 6803
 
Cyanothece sp. ATCC 51142

Gene: cce_0569: Nitrogen fixation related protein
 
Cyanothece sp. PCC 8801

Gene: PCC8801_1794: Nitrogen fixation related protein
 
Cyanothece sp. PCC 7425

Gene: Cyan7425_4802: Nitrogen fixation related protein
 
Microcystis aeruginosa NIES-843
 
Nostoc sp. PCC 7120

Gene: all1432: Nitrogen fixation related protein
*
Trichodesmium erythraeum IMS101

Site:
position = -98
score = 4.1804
sequence = AGTGACTCAAGTCAAC

Gene: Tery_4143: Nitrogen fixation related protein
 
Synechococcus elongatus PCC 7942
 
Prochlorococcus marinus str. MIT 9313
 
Synechococcus sp. JA-3-3Ab
 
Synechococcus sp. WH 8102
 
Gloeobacter violaceus PCC 7421
 
Thermosynechococcus elongatus BP-1
Nitrogen fixation related protein
hesB
 
Synechococcus sp. PCC 7002
 
Synechocystis sp. PCC 6803
 
Cyanothece sp. ATCC 51142

Gene: cce_0570: Nitrogen fixation related protein
 
Cyanothece sp. PCC 8801

Gene: PCC8801_1795: Nitrogen fixation related protein
*
Cyanothece sp. PCC 7425

Site:
position = -227
score = 4.15441
sequence = AGCGATCAAAATCATC

Gene: Cyan7425_4803: Nitrogen fixation related protein
 
Microcystis aeruginosa NIES-843
 
Nostoc sp. PCC 7120

Gene: all1431: Nitrogen fixation related protein
 
Trichodesmium erythraeum IMS101

Gene: Tery_4144: Nitrogen fixation related protein
 
Synechococcus elongatus PCC 7942
 
Prochlorococcus marinus str. MIT 9313
 
Synechococcus sp. JA-3-3Ab
 
Synechococcus sp. WH 8102
 
Gloeobacter violaceus PCC 7421
 
Thermosynechococcus elongatus BP-1
Nitrogen fixation related protein
 
CRON 14.
Cyan7425_4795
 
Synechococcus sp. PCC 7002
 
Synechocystis sp. PCC 6803
 
Cyanothece sp. ATCC 51142
 
Cyanothece sp. PCC 8801
*
Cyanothece sp. PCC 7425

Site:
position = -208
score = 3.77547
sequence = TCTGAGCTGAAACACG

Gene: Cyan7425_4795: Mo-dependent nitrogenase family protein
 
Microcystis aeruginosa NIES-843
*
Nostoc sp. PCC 7120

Site:
position = -343
score = 3.13226
sequence = GATGAAATGGATCGCA

Gene: all1439: Mo-dependent nitrogenase family protein
 
Trichodesmium erythraeum IMS101
 
Synechococcus elongatus PCC 7942
 
Prochlorococcus marinus str. MIT 9313
 
Synechococcus sp. JA-3-3Ab
 
Synechococcus sp. WH 8102
 
Gloeobacter violaceus PCC 7421
 
Thermosynechococcus elongatus BP-1
Mo-dependent nitrogenase family protein
 
CRON 15.
nifB
 
Synechococcus sp. PCC 7002
 
Synechocystis sp. PCC 6803
*
Cyanothece sp. ATCC 51142

Site:
position = -123
score = 3.99619
sequence = GGTGGTATAAATGACA

Gene: cce_0554: FeMo nitrogenase cofactor biosynthesis protein
 
Cyanothece sp. PCC 8801

Gene: PCC8801_1780: FeMo nitrogenase cofactor biosynthesis protein
*
Cyanothece sp. PCC 7425

Site:
position = -40
score = 3.92179
sequence = ACTGTTATAAAGCACC

Gene: Cyan7425_2361: FeMo nitrogenase cofactor biosynthesis protein
 
Microcystis aeruginosa NIES-843
*
Nostoc sp. PCC 7120

Site:
position = -299
score = 3.14452
sequence = ACTGCTATAAATCTTA

Gene: all1517: FeMo nitrogenase cofactor biosynthesis protein
*
Trichodesmium erythraeum IMS101

Site:
position = -356
score = 3.69485
sequence = TATGACTTATAGCATG

Gene: Tery_4133: FeMo nitrogenase cofactor biosynthesis protein
 
Synechococcus elongatus PCC 7942
 
Prochlorococcus marinus str. MIT 9313
 
Synechococcus sp. JA-3-3Ab

Gene: CYA_1828: FeMo nitrogenase cofactor biosynthesis protein
 
Synechococcus sp. WH 8102
 
Gloeobacter violaceus PCC 7421
 
Thermosynechococcus elongatus BP-1
FeMo nitrogenase cofactor biosynthesis protein
cce_0555
 
Synechococcus sp. PCC 7002
 
Synechocystis sp. PCC 6803
 
Cyanothece sp. ATCC 51142

Gene: cce_0555: Conserved hypothetical protein, putatuve subunit of nitrogenase
 
Cyanothece sp. PCC 8801

Gene: PCC8801_1781: Conserved hypothetical protein, putatuve subunit of nitrogenase
 
Cyanothece sp. PCC 7425
 
Microcystis aeruginosa NIES-843
 
Nostoc sp. PCC 7120
 
Trichodesmium erythraeum IMS101
 
Synechococcus elongatus PCC 7942
 
Prochlorococcus marinus str. MIT 9313
 
Synechococcus sp. JA-3-3Ab
 
Synechococcus sp. WH 8102
 
Gloeobacter violaceus PCC 7421
 
Thermosynechococcus elongatus BP-1
Conserved hypothetical protein, putatuve subunit of nitrogenase
cce_0556
 
Synechococcus sp. PCC 7002
 
Synechocystis sp. PCC 6803
 
Cyanothece sp. ATCC 51142

Gene: cce_0556: 4Fe-4S ferredoxin subunit of nitrogenase
 
Cyanothece sp. PCC 8801

Gene: PCC8801_1782: 4Fe-4S ferredoxin subunit of nitrogenase
 
Cyanothece sp. PCC 7425
 
Microcystis aeruginosa NIES-843
 
Nostoc sp. PCC 7120
 
Trichodesmium erythraeum IMS101
 
Synechococcus elongatus PCC 7942
 
Prochlorococcus marinus str. MIT 9313
 
Synechococcus sp. JA-3-3Ab
 
Synechococcus sp. WH 8102
 
Gloeobacter violaceus PCC 7421
 
Thermosynechococcus elongatus BP-1
4Fe-4S ferredoxin subunit of nitrogenase
nifS
 
Synechococcus sp. PCC 7002
 
Synechocystis sp. PCC 6803
 
Cyanothece sp. ATCC 51142

Gene: cce_0557: Cysteine desulfurase (EC 2.8.1.7)
*
Cyanothece sp. PCC 8801

Site:
position = -80
score = 3.85589
sequence = TTTGAAAATTATCACC

Gene: PCC8801_1783: Cysteine desulfurase (EC 2.8.1.7)
 
Cyanothece sp. PCC 7425

Gene: Cyan7425_2362: Cysteine desulfurase (EC 2.8.1.7)
 
Microcystis aeruginosa NIES-843
 
Nostoc sp. PCC 7120

Gene: all1457: Cysteine desulfurase (EC 2.8.1.7)
 
Trichodesmium erythraeum IMS101

Gene: Tery_4134: Cysteine desulfurase (EC 2.8.1.7)
 
Synechococcus elongatus PCC 7942
 
Prochlorococcus marinus str. MIT 9313
 
Synechococcus sp. JA-3-3Ab

Gene: CYA_1826: Cysteine desulfurase (EC 2.8.1.7)
 
Synechococcus sp. WH 8102
 
Gloeobacter violaceus PCC 7421
 
Thermosynechococcus elongatus BP-1
Cysteine desulfurase (EC 2.8.1.7)
nifU
 
Synechococcus sp. PCC 7002
 
Synechocystis sp. PCC 6803
 
Cyanothece sp. ATCC 51142

Gene: cce_0558: Nitrogen fixation protein
 
Cyanothece sp. PCC 8801

Gene: PCC8801_1784: Nitrogen fixation protein
 
Cyanothece sp. PCC 7425

Gene: Cyan7425_2363: Nitrogen fixation protein
 
Microcystis aeruginosa NIES-843
 
Nostoc sp. PCC 7120

Gene: all1456: Nitrogen fixation protein
 
Trichodesmium erythraeum IMS101

Gene: Tery_4135: Nitrogen fixation protein
 
Synechococcus elongatus PCC 7942
 
Prochlorococcus marinus str. MIT 9313
 
Synechococcus sp. JA-3-3Ab

Gene: CYA_1825: Nitrogen fixation protein
 
Synechococcus sp. WH 8102
 
Gloeobacter violaceus PCC 7421
 
Thermosynechococcus elongatus BP-1
Nitrogen fixation protein
 
CRON 16.
serS
 
Synechococcus sp. PCC 7002

Gene: SYNPCC7002_A2328: Seryl-tRNA synthetase (EC 6.1.1.11)
*
Synechocystis sp. PCC 6803

Site:
position = -211
score = 3.6212
sequence = ATTGATAGAAGGCACT

Gene: slr1703: Seryl-tRNA synthetase (EC 6.1.1.11)
*
Cyanothece sp. ATCC 51142

Site:
position = -170
score = 3.99029
sequence = GTTGATAAAGTTCATA

Gene: cce_0927: Seryl-tRNA synthetase (EC 6.1.1.11)
*
Cyanothece sp. PCC 8801

Site:
position = -155
score = 3.67233
sequence = TTTGATCAATTTGACA

Gene: PCC8801_3186: Seryl-tRNA synthetase (EC 6.1.1.11)
*
Cyanothece sp. PCC 7425

Site:
position = -420
score = 3.65031
sequence = TGTGATACATCACACC

Gene: Cyan7425_4645: Seryl-tRNA synthetase (EC 6.1.1.11)
 
Microcystis aeruginosa NIES-843

Gene: MAE_13050: Seryl-tRNA synthetase (EC 6.1.1.11)
 
Nostoc sp. PCC 7120

Gene: all3976: Seryl-tRNA synthetase (EC 6.1.1.11)
 
Trichodesmium erythraeum IMS101

Gene: Tery_3523: Seryl-tRNA synthetase (EC 6.1.1.11)
 
Synechococcus elongatus PCC 7942

Gene: Synpcc7942_0449: Seryl-tRNA synthetase (EC 6.1.1.11)
 
Prochlorococcus marinus str. MIT 9313
 
Synechococcus sp. JA-3-3Ab

Gene: CYA_0247: Seryl-tRNA synthetase (EC 6.1.1.11)
 
Synechococcus sp. WH 8102

Gene: SYNW1894: Seryl-tRNA synthetase (EC 6.1.1.11)
 
Gloeobacter violaceus PCC 7421

Gene: gvip075: Seryl-tRNA synthetase (EC 6.1.1.11)
*
Thermosynechococcus elongatus BP-1

Site:
position = 3
score = 4.21046
sequence = ATTGATCTAAAACAAC

Gene: null: Seryl-tRNA synthetase (EC 6.1.1.11)
Seryl-tRNA synthetase (EC 6.1.1.11)
murF
*
Synechococcus sp. PCC 7002

Site:
position = -92
score = 4.11588
sequence = GGTGACAAATATCACT

Gene: SYNPCC7002_A2693: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase (EC 6.3.2.10)
*
Synechocystis sp. PCC 6803

Site:
position = -101
score = 5.00672
sequence = GGTGATCTAGATCACA

Gene: slr1351: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase (EC 6.3.2.10)
*
Cyanothece sp. ATCC 51142

Site:
position = -83
score = 5.138
sequence = TGTGATCTTGATCACA

Gene: cce_4424: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase (EC 6.3.2.10)
*
Cyanothece sp. PCC 8801

Site:
position = -74
score = 4.79187
sequence = AGTGATCTGGGTCACA

Gene: PCC8801_2372: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase (EC 6.3.2.10)
 
Cyanothece sp. PCC 7425

Gene: Cyan7425_5148: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase (EC 6.3.2.10)
 
Microcystis aeruginosa NIES-843

Gene: MAE_23180: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase (EC 6.3.2.10)
 
Nostoc sp. PCC 7120

Gene: all0036: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase (EC 6.3.2.10)
 
Trichodesmium erythraeum IMS101

Gene: Tery_0495: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase (EC 6.3.2.10)
 
Synechococcus elongatus PCC 7942

Gene: Synpcc7942_1841: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase (EC 6.3.2.10)
 
Prochlorococcus marinus str. MIT 9313

Gene: PMT0401: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase (EC 6.3.2.10)
*
Synechococcus sp. JA-3-3Ab

Site:
position = -32
score = 3.84522
sequence = ATTGACTAGAGTCATG

Gene: CYA_0077: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase (EC 6.3.2.10)
 
Synechococcus sp. WH 8102

Gene: SYNW1002: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase (EC 6.3.2.10)
 
Gloeobacter violaceus PCC 7421

Gene: gvip335: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase (EC 6.3.2.10)
 
Thermosynechococcus elongatus BP-1

Gene: null: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase (EC 6.3.2.10)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase (EC 6.3.2.10)
 
CRON 17.
SYNPCC7002_A1600
*
Synechococcus sp. PCC 7002

Site:
position = -141
score = 4.48296
sequence = CGTGATCAGAGTCACG

Gene: SYNPCC7002_A1600: Conserved hypothetical protein
*2
Synechocystis sp. PCC 6803

Site:
position = -203
score = 4.85819
sequence = TGTGATCCAGATCACA

Gene: slr0442: Conserved hypothetical protein

Site:
position = -162
score = 5.25891
sequence = TGTGATCTAGATCACA

Gene: sll1268: Conserved hypothetical protein
*
Cyanothece sp. ATCC 51142

Site:
position = -48
score = 4.37711
sequence = TCTGACTGAAATCACA

Gene: cce_3647: Conserved hypothetical protein
 
Cyanothece sp. PCC 8801
*
Cyanothece sp. PCC 7425

Site:
position = -102
score = 4.40902
sequence = TGTGATCTCAGTCATG

Gene: Cyan7425_5163: Conserved hypothetical protein
*
Microcystis aeruginosa NIES-843

Site:
position = -130
score = 4.8164
sequence = TGTGATTTTACTCACA

Gene: MAE_53490: Conserved hypothetical protein
 
Nostoc sp. PCC 7120
 
Trichodesmium erythraeum IMS101
 
Synechococcus elongatus PCC 7942
 
Prochlorococcus marinus str. MIT 9313
 
Synechococcus sp. JA-3-3Ab
 
Synechococcus sp. WH 8102
 
Gloeobacter violaceus PCC 7421
 
Thermosynechococcus elongatus BP-1
Conserved hypothetical protein
 
CRON 18.
sll1708
 
Synechococcus sp. PCC 7002
*
Synechocystis sp. PCC 6803

Site:
position = -77
score = 4.43972
sequence = CGTGATAGTAATCACC

Gene: sll1708: Two component transcriptional regulator, LuxR family
*
Cyanothece sp. ATCC 51142

Site:
position = -1
score = 3.78591
sequence = GGTGAATTTAAGCATG

Gene: cce_2365: Two component transcriptional regulator, LuxR family
 
Cyanothece sp. PCC 8801

Gene: PCC8801_2623: Two component transcriptional regulator, LuxR family
 
Cyanothece sp. PCC 7425

Gene: Cyan7425_4561: Two component transcriptional regulator, LuxR family
 
Microcystis aeruginosa NIES-843

Gene: MAE_19750: Two component transcriptional regulator, LuxR family
 
Nostoc sp. PCC 7120

Gene: alr0913: Two component transcriptional regulator, LuxR family
 
Trichodesmium erythraeum IMS101
 
Synechococcus elongatus PCC 7942
 
Prochlorococcus marinus str. MIT 9313
 
Synechococcus sp. JA-3-3Ab
 
Synechococcus sp. WH 8102
 
Gloeobacter violaceus PCC 7421
 
Thermosynechococcus elongatus BP-1

Gene: tlr0724: Two component transcriptional regulator, LuxR family
Two component transcriptional regulator, LuxR family
 
CRON 19.
slr1667
 
Synechococcus sp. PCC 7002
*
Synechocystis sp. PCC 6803

Site:
position = -259
score = 4.86255
sequence = TGTGATCTGGGTCACA

Gene: slr1667: Hypothetical protein
 
Cyanothece sp. ATCC 51142
 
Cyanothece sp. PCC 8801
 
Cyanothece sp. PCC 7425
 
Microcystis aeruginosa NIES-843
 
Nostoc sp. PCC 7120
 
Trichodesmium erythraeum IMS101
 
Synechococcus elongatus PCC 7942
 
Prochlorococcus marinus str. MIT 9313
 
Synechococcus sp. JA-3-3Ab
 
Synechococcus sp. WH 8102
 
Gloeobacter violaceus PCC 7421
 
Thermosynechococcus elongatus BP-1
Hypothetical protein
slr1668
 
Synechococcus sp. PCC 7002
 
Synechocystis sp. PCC 6803

Gene: slr1668: Hypothetical protein
 
Cyanothece sp. ATCC 51142
 
Cyanothece sp. PCC 8801
 
Cyanothece sp. PCC 7425
 
Microcystis aeruginosa NIES-843
 
Nostoc sp. PCC 7120
 
Trichodesmium erythraeum IMS101
 
Synechococcus elongatus PCC 7942
 
Prochlorococcus marinus str. MIT 9313
 
Synechococcus sp. JA-3-3Ab
 
Synechococcus sp. WH 8102
 
Gloeobacter violaceus PCC 7421
 
Thermosynechococcus elongatus BP-1
Hypothetical protein
 
CRON 20.
Cyan7425_1076
 
Synechococcus sp. PCC 7002
 
Synechocystis sp. PCC 6803
 
Cyanothece sp. ATCC 51142
 
Cyanothece sp. PCC 8801
*
Cyanothece sp. PCC 7425

Site:
position = -107
score = 4.75764
sequence = AGTGATCAAAGTCATG

Gene: Cyan7425_1076: Hypothetical protein
 
Microcystis aeruginosa NIES-843
 
Nostoc sp. PCC 7120
 
Trichodesmium erythraeum IMS101
 
Synechococcus elongatus PCC 7942
 
Prochlorococcus marinus str. MIT 9313
 
Synechococcus sp. JA-3-3Ab
 
Synechococcus sp. WH 8102
 
Gloeobacter violaceus PCC 7421
 
Thermosynechococcus elongatus BP-1
Hypothetical protein
SYNPCC7002_A2113
 
Synechococcus sp. PCC 7002

Gene: SYNPCC7002_A2113: Transglutaminase-like protein
*
Synechocystis sp. PCC 6803

Site:
position = -188
score = 3.79727
sequence = AATGATAAACATCACT

Gene: sll1608: Transglutaminase-like protein
 
Cyanothece sp. ATCC 51142

Gene: cce_2150: Transglutaminase-like protein
*
Cyanothece sp. PCC 8801

Site:
position = -115
score = 4.1991
sequence = ATTGATATTAATCAAT

Gene: PCC8801_3693: Transglutaminase-like protein
 
Cyanothece sp. PCC 7425

Gene: Cyan7425_1077: Transglutaminase-like protein
 
Microcystis aeruginosa NIES-843

Gene: MAE_06550: Transglutaminase-like protein
 
Nostoc sp. PCC 7120

Gene: alr0103: Transglutaminase-like protein
*
Trichodesmium erythraeum IMS101

Site:
position = -50
score = 4.69315
sequence = AATGATCTTAATCAAA

Gene: Tery_0156: Transglutaminase-like protein
 
Synechococcus elongatus PCC 7942
 
Prochlorococcus marinus str. MIT 9313
 
Synechococcus sp. JA-3-3Ab
 
Synechococcus sp. WH 8102
 
Gloeobacter violaceus PCC 7421
 
Thermosynechococcus elongatus BP-1

Gene: tlr0984: Transglutaminase-like protein
Transglutaminase-like protein
 
CRON 21.
slr1503
 
Synechococcus sp. PCC 7002

Gene: SYNPCC7002_A0741: Predicted aldo/keto reductase
*
Synechocystis sp. PCC 6803

Site:
position = -1
score = 3.79561
sequence = TATGACAATTAGCACC

Gene: slr1503: Predicted aldo/keto reductase
*
Cyanothece sp. ATCC 51142

Site:
position = -72
score = 4.06477
sequence = TGTGAGTTTTGTCACG

Gene: cce_2512: Predicted aldo/keto reductase
*
Cyanothece sp. PCC 8801

Site:
position = -35
score = 4.62734
sequence = TGTGAGCTAAATCACT

Gene: PCC8801_0019: Predicted aldo/keto reductase
 
Cyanothece sp. PCC 7425

Gene: Cyan7425_5143: Predicted aldo/keto reductase
 
Microcystis aeruginosa NIES-843

Gene: MAE_37350: Predicted aldo/keto reductase
 
Nostoc sp. PCC 7120

Gene: alr0300: Predicted aldo/keto reductase
*
Trichodesmium erythraeum IMS101

Site:
position = -99
score = 3.87552
sequence = CATGGTTTTAATCATA

Gene: Tery_2155: Predicted aldo/keto reductase
 
Synechococcus elongatus PCC 7942
 
Prochlorococcus marinus str. MIT 9313
 
Synechococcus sp. JA-3-3Ab
 
Synechococcus sp. WH 8102

Gene: SYNW2031: Predicted aldo/keto reductase
 
Gloeobacter violaceus PCC 7421
 
Thermosynechococcus elongatus BP-1
Predicted aldo/keto reductase
 
CRON 22.
cce_0244
 
Synechococcus sp. PCC 7002
 
Synechocystis sp. PCC 6803
*
Cyanothece sp. ATCC 51142

Site:
position = -138
score = 4.61225
sequence = GGTGATTTAAGTCATC

Gene: cce_0244: Conserved hypothetical protein
 
Cyanothece sp. PCC 8801

Gene: PCC8801_3629: Conserved hypothetical protein
 
Cyanothece sp. PCC 7425
 
Microcystis aeruginosa NIES-843

Gene: MAE_09560: Conserved hypothetical protein
*
Nostoc sp. PCC 7120

Site:
position = -54
score = 4.21664
sequence = GTTGATTTAATTCATA

Gene: all1210: Conserved hypothetical protein
*
Trichodesmium erythraeum IMS101

Site:
position = -345
score = 3.95371
sequence = AATGATCAAAATTATA

Gene: Tery_3463: Conserved hypothetical protein
 
Synechococcus elongatus PCC 7942
 
Prochlorococcus marinus str. MIT 9313
 
Synechococcus sp. JA-3-3Ab
 
Synechococcus sp. WH 8102
 
Gloeobacter violaceus PCC 7421

Gene: glr1294: Conserved hypothetical protein
 
Thermosynechococcus elongatus BP-1
Conserved hypothetical protein
 
CRON 23.
gap2
*
Synechococcus sp. PCC 7002

Site:
position = -65
score = 3.69325
sequence = TATGATTGGGGTCATC

Gene: SYNPCC7002_A0106: Glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.59)
 
Synechocystis sp. PCC 6803

Gene: sll1342: Glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.59)
 
Cyanothece sp. ATCC 51142
*
Cyanothece sp. PCC 8801

Site:
position = -31
score = 3.98695
sequence = ATTGAGCTAAAGCATA

Gene: PCC8801_2557: Glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.59)
 
Cyanothece sp. PCC 7425

Gene: Cyan7425_0946: Glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.59)
 
Microcystis aeruginosa NIES-843

Gene: MAE_25030: Glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.59)
*
Nostoc sp. PCC 7120

Site:
position = -1
score = 4.071
sequence = TGTGATTAGAGTCGCA

Site:
position = -56
score = 3.79379
sequence = TATGATTGGGGTCAAA

Gene: all5062: Glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.59)
*
Trichodesmium erythraeum IMS101

Site:
position = -410
score = 3.64617
sequence = TATGATAATTCTCAAG

Gene: Tery_4030: Glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.59)
 
Synechococcus elongatus PCC 7942

Gene: Synpcc7942_1742: Glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.59)
 
Prochlorococcus marinus str. MIT 9313

Gene: PMT0028: Glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.59)
 
Synechococcus sp. JA-3-3Ab

Gene: CYA_0325: Glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.59)
 
Synechococcus sp. WH 8102

Gene: SYNW0030: Glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.59)
 
Gloeobacter violaceus PCC 7421

Gene: gvip056: Glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.59)
 
Thermosynechococcus elongatus BP-1

Gene: null: Glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.59)
Glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.59)
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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