Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog DgoR - Enterobacteriales

Properties
Regulator type: Transcription factor
Regulator family: GntR/Others
Regulation mode: repressor
Biological process: Galactonate utilization
Effector: Galactonate
Phylum: Proteobacteria/gamma
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 19 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Escherichia coli str. K-12 substr. MG1655 5 1
Salmonella typhimurium LT2 4 1
Citrobacter koseri ATCC BAA-895
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 5 1
Enterobacter sp. 638 5 1
Erwinia amylovora ATCC 49946
Yersinia pestis KIM
Serratia proteamaculans 568 6 2
Erwinia carotovora subsp. atroseptica SCRI1043 5 1
Edwardsiella tarda EIB202
Proteus mirabilis HI4320
Photorhabdus luminescens subsp. laumondii TTO1
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
Spro_0710
 
Escherichia coli str. K-12 substr. MG1655
 
Salmonella typhimurium LT2
 
Citrobacter koseri ATCC BAA-895
 
Klebsiella pneumoniae subsp. pneumoniae MGH 78578
 
Enterobacter sp. 638
 
Erwinia amylovora ATCC 49946
 
Yersinia pestis KIM
*
Serratia proteamaculans 568

Site:
position = -118
score = 3.63876
sequence = TTGTATTACCT

Site:
position = -140
score = 4.75763
sequence = TTGTATTACAA

Gene: Spro_0710: Galactose-proton symport
 
Erwinia carotovora subsp. atroseptica SCRI1043
 
Edwardsiella tarda EIB202
 
Proteus mirabilis HI4320
 
Photorhabdus luminescens subsp. laumondii TTO1
Galactose-proton symport
 
CRON 2.
dgoR
*
Escherichia coli str. K-12 substr. MG1655

Site:
position = -76
score = 4.03213
sequence = TGGTACTACAA

Site:
position = -119
score = 4.05878
sequence = TTGTACTACAT

Site:
position = -140
score = 5.48313
sequence = TTGTAGTACAA

Gene: b4479: D-Galactonate repressor DgoR, GntR family
*
Salmonella typhimurium LT2

Site:
position = -76
score = 4.03213
sequence = TAGTACTACAA

Site:
position = -140
score = 5.48313
sequence = TTGTAGTACAA

Site:
position = -119
score = 4.05878
sequence = TTGTACTACAT

Gene: STM3830: D-Galactonate repressor DgoR, GntR family
 
Citrobacter koseri ATCC BAA-895
*
Klebsiella pneumoniae subsp. pneumoniae MGH 78578

Site:
position = -76
score = 4.75763
sequence = TAGTAGTACAA

Site:
position = -119
score = 4.05878
sequence = TTGTACTACAT

Site:
position = -140
score = 5.48313
sequence = TTGTAGTACAA

Gene: KPN_04098: D-Galactonate repressor DgoR, GntR family
*
Enterobacter sp. 638

Site:
position = -76
score = 4.33761
sequence = TTGTACTGCAA

Site:
position = -119
score = 4.05878
sequence = TTGTACTACAT

Site:
position = -140
score = 5.48313
sequence = TTGTAGTACAA

Gene: Ent638_0006: D-Galactonate repressor DgoR, GntR family
 
Erwinia amylovora ATCC 49946
 
Yersinia pestis KIM
*
Serratia proteamaculans 568

Site:
position = -68
score = 3.30663
sequence = AGGTACTACAA

Site:
position = -24
score = 3.91758
sequence = TTGTGCTGCAA

Site:
position = -89
score = 5.48313
sequence = TTGTAGTACAA

Gene: Spro_0041: D-Galactonate repressor DgoR, GntR family
*
Erwinia carotovora subsp. atroseptica SCRI1043

Site:
position = -129
score = 4.03213
sequence = TGGTACTACAA

Site:
position = -150
score = 5.48313
sequence = TTGTAGTACAA

Gene: ECA4419: D-Galactonate repressor DgoR, GntR family
 
Edwardsiella tarda EIB202
 
Proteus mirabilis HI4320
 
Photorhabdus luminescens subsp. laumondii TTO1
D-Galactonate repressor DgoR, GntR family
dgoK
 
Escherichia coli str. K-12 substr. MG1655

Gene: b3693: 2-dehydro-3-deoxygalactonokinase (EC 2.7.1.58)
 
Salmonella typhimurium LT2

Gene: STM3829: 2-dehydro-3-deoxygalactonokinase (EC 2.7.1.58)
 
Citrobacter koseri ATCC BAA-895
 
Klebsiella pneumoniae subsp. pneumoniae MGH 78578

Gene: KPN_04097: 2-dehydro-3-deoxygalactonokinase (EC 2.7.1.58)
 
Enterobacter sp. 638

Gene: Ent638_0007: 2-dehydro-3-deoxygalactonokinase (EC 2.7.1.58)
 
Erwinia amylovora ATCC 49946
 
Yersinia pestis KIM
 
Serratia proteamaculans 568

Gene: Spro_0042: 2-dehydro-3-deoxygalactonokinase (EC 2.7.1.58)
 
Erwinia carotovora subsp. atroseptica SCRI1043

Gene: ECA4418: 2-dehydro-3-deoxygalactonokinase (EC 2.7.1.58)
 
Edwardsiella tarda EIB202
 
Proteus mirabilis HI4320
 
Photorhabdus luminescens subsp. laumondii TTO1
2-dehydro-3-deoxygalactonokinase (EC 2.7.1.58)
dgoA
 
Escherichia coli str. K-12 substr. MG1655

Gene: b4477: 2-dehydro-3-deoxyphosphogalactonate aldolase (EC 4.1.2.21)
 
Salmonella typhimurium LT2
 
Citrobacter koseri ATCC BAA-895
 
Klebsiella pneumoniae subsp. pneumoniae MGH 78578

Gene: KPN_04096: 2-dehydro-3-deoxyphosphogalactonate aldolase (EC 4.1.2.21)
 
Enterobacter sp. 638

Gene: Ent638_0008: 2-dehydro-3-deoxyphosphogalactonate aldolase (EC 4.1.2.21)
 
Erwinia amylovora ATCC 49946
 
Yersinia pestis KIM
 
Serratia proteamaculans 568

Gene: Spro_0043: 2-dehydro-3-deoxyphosphogalactonate aldolase (EC 4.1.2.21)
 
Erwinia carotovora subsp. atroseptica SCRI1043

Gene: ECA4417: 2-dehydro-3-deoxyphosphogalactonate aldolase (EC 4.1.2.21)
 
Edwardsiella tarda EIB202
 
Proteus mirabilis HI4320
 
Photorhabdus luminescens subsp. laumondii TTO1
2-dehydro-3-deoxyphosphogalactonate aldolase (EC 4.1.2.21)
dgoD
 
Escherichia coli str. K-12 substr. MG1655

Gene: b4478: Galactonate dehydratase (EC 4.2.1.6)
 
Salmonella typhimurium LT2

Gene: STM3828: Galactonate dehydratase (EC 4.2.1.6)
 
Citrobacter koseri ATCC BAA-895
 
Klebsiella pneumoniae subsp. pneumoniae MGH 78578

Gene: KPN_04095: Galactonate dehydratase (EC 4.2.1.6)
 
Enterobacter sp. 638

Gene: Ent638_0009: Galactonate dehydratase (EC 4.2.1.6)
 
Erwinia amylovora ATCC 49946
 
Yersinia pestis KIM
 
Serratia proteamaculans 568

Gene: Spro_0044: Galactonate dehydratase (EC 4.2.1.6)
 
Erwinia carotovora subsp. atroseptica SCRI1043

Gene: ECA4416: Galactonate dehydratase (EC 4.2.1.6)
 
Edwardsiella tarda EIB202
 
Proteus mirabilis HI4320
 
Photorhabdus luminescens subsp. laumondii TTO1
Galactonate dehydratase (EC 4.2.1.6)
dgoT
 
Escherichia coli str. K-12 substr. MG1655

Gene: b3691: D-galactonate transport
 
Salmonella typhimurium LT2

Gene: STM3827: D-galactonate transport
 
Citrobacter koseri ATCC BAA-895
 
Klebsiella pneumoniae subsp. pneumoniae MGH 78578

Gene: KPN_04094: D-galactonate transport
 
Enterobacter sp. 638

Gene: Ent638_0010: D-galactonate transport
 
Erwinia amylovora ATCC 49946
 
Yersinia pestis KIM
 
Serratia proteamaculans 568

Gene: Spro_0045: D-galactonate transport
 
Erwinia carotovora subsp. atroseptica SCRI1043

Gene: ECA4415: D-galactonate transport
 
Edwardsiella tarda EIB202
 
Proteus mirabilis HI4320
 
Photorhabdus luminescens subsp. laumondii TTO1
D-galactonate transport
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulatory Sites [ FASTA format ] DOWNLOAD