Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog AgaR - Enterobacteriales

Properties
Regulator type: Transcription factor
Regulator family: DeoR
Regulation mode: repressor
Biological process: N-acetylgalactosamine utilization
Effector: N-acetylgalactosamine-6-phosphate; Galactosamine-6-phosphate
Phylum: Proteobacteria/gamma
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 19 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Escherichia coli str. K-12 substr. MG1655 9 3
Salmonella typhimurium LT2
Citrobacter koseri ATCC BAA-895 9 3
Klebsiella pneumoniae subsp. pneumoniae MGH 78578
Enterobacter sp. 638 12 3
Erwinia amylovora ATCC 49946
Yersinia pestis KIM
Serratia proteamaculans 568
Erwinia carotovora subsp. atroseptica SCRI1043
Edwardsiella tarda EIB202
Proteus mirabilis HI4320
Photorhabdus luminescens subsp. laumondii TTO1
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
agaS
*
Escherichia coli str. K-12 substr. MG1655

Site:
position = -150
score = 5.63346
sequence = ATTTCGTTTTATTTC

Site:
position = -119
score = 5.1155
sequence = CTTTCAGTTTCTTTT

Gene: b3136: Galactosamine-6-phosphate isomerase (EC 5.3.1.-)
 
Salmonella typhimurium LT2
*
Citrobacter koseri ATCC BAA-895

Site:
position = -119
score = 5.44751
sequence = CTTTCGATTTCTTTT

Site:
position = -252
score = 5.2971
sequence = CTTTCTTTTTCTTTC

Site:
position = -150
score = 5.68728
sequence = TTTTCGTTTTATTTC

Gene: CKO_04536: Galactosamine-6-phosphate isomerase (EC 5.3.1.-)
 
Klebsiella pneumoniae subsp. pneumoniae MGH 78578
*
Enterobacter sp. 638

Site:
position = -144
score = 5.68728
sequence = TTTTCGTTTTATTTC

Site:
position = -113
score = 4.6128
sequence = CTTTCACTTTCCTTT

Gene: Ent638_3577: Galactosamine-6-phosphate isomerase (EC 5.3.1.-)
 
Erwinia amylovora ATCC 49946
 
Yersinia pestis KIM

Gene: y3218: Galactosamine-6-phosphate isomerase (EC 5.3.1.-)
 
Serratia proteamaculans 568

Gene: Spro_2578: Galactosamine-6-phosphate isomerase (EC 5.3.1.-)
 
Erwinia carotovora subsp. atroseptica SCRI1043
 
Edwardsiella tarda EIB202
 
Proteus mirabilis HI4320
 
Photorhabdus luminescens subsp. laumondii TTO1

Gene: plu0834: Galactosamine-6-phosphate isomerase (EC 5.3.1.-)
Galactosamine-6-phosphate isomerase (EC 5.3.1.-)
agaY
 
Escherichia coli str. K-12 substr. MG1655

Gene: b3137: Tagatose-1,6-bisphosphate aldolase (EC 4.1.2.-)
 
Salmonella typhimurium LT2
 
Citrobacter koseri ATCC BAA-895

Gene: CKO_04537: Tagatose-1,6-bisphosphate aldolase (EC 4.1.2.-)
 
Klebsiella pneumoniae subsp. pneumoniae MGH 78578
 
Enterobacter sp. 638

Gene: Ent638_3578: Tagatose-1,6-bisphosphate aldolase (EC 4.1.2.-)
 
Erwinia amylovora ATCC 49946
 
Yersinia pestis KIM

Gene: y3229: Tagatose-1,6-bisphosphate aldolase (EC 4.1.2.-)
 
Serratia proteamaculans 568

Gene: Spro_2579: Tagatose-1,6-bisphosphate aldolase (EC 4.1.2.-)
 
Erwinia carotovora subsp. atroseptica SCRI1043
 
Edwardsiella tarda EIB202

Gene: ETAE_2526: Tagatose-1,6-bisphosphate aldolase (EC 4.1.2.-)
 
Proteus mirabilis HI4320

Gene: PMI2145: Tagatose-1,6-bisphosphate aldolase (EC 4.1.2.-)
 
Photorhabdus luminescens subsp. laumondii TTO1

Gene: plu0839: Tagatose-1,6-bisphosphate aldolase (EC 4.1.2.-)
Tagatose-1,6-bisphosphate aldolase (EC 4.1.2.-)
agaB
 
Escherichia coli str. K-12 substr. MG1655

Gene: b3138: PTS system, galactosamine-specific IIB component (EC 2.7.1.69)
 
Salmonella typhimurium LT2
 
Citrobacter koseri ATCC BAA-895
 
Klebsiella pneumoniae subsp. pneumoniae MGH 78578
 
Enterobacter sp. 638

Gene: Ent638_3579: PTS system, galactosamine-specific IIB component (EC 2.7.1.69)
 
Erwinia amylovora ATCC 49946
 
Yersinia pestis KIM
 
Serratia proteamaculans 568
 
Erwinia carotovora subsp. atroseptica SCRI1043
 
Edwardsiella tarda EIB202
 
Proteus mirabilis HI4320
 
Photorhabdus luminescens subsp. laumondii TTO1
PTS system, galactosamine-specific IIB component (EC 2.7.1.69)
agaC
 
Escherichia coli str. K-12 substr. MG1655

Gene: b3139: PTS system, galactosamine-specific IIC component (EC 2.7.1.69)
 
Salmonella typhimurium LT2
 
Citrobacter koseri ATCC BAA-895
 
Klebsiella pneumoniae subsp. pneumoniae MGH 78578
 
Enterobacter sp. 638

Gene: Ent638_3580: PTS system, galactosamine-specific IIC component (EC 2.7.1.69)
 
Erwinia amylovora ATCC 49946
 
Yersinia pestis KIM
 
Serratia proteamaculans 568
 
Erwinia carotovora subsp. atroseptica SCRI1043
 
Edwardsiella tarda EIB202
 
Proteus mirabilis HI4320
 
Photorhabdus luminescens subsp. laumondii TTO1
PTS system, galactosamine-specific IIC component (EC 2.7.1.69)
agaD
 
Escherichia coli str. K-12 substr. MG1655

Gene: b3140: PTS system, galactosamine-specific IID component (EC 2.7.1.69)
 
Salmonella typhimurium LT2
 
Citrobacter koseri ATCC BAA-895
 
Klebsiella pneumoniae subsp. pneumoniae MGH 78578
 
Enterobacter sp. 638

Gene: Ent638_3581: PTS system, galactosamine-specific IID component (EC 2.7.1.69)
 
Erwinia amylovora ATCC 49946
 
Yersinia pestis KIM
 
Serratia proteamaculans 568
 
Erwinia carotovora subsp. atroseptica SCRI1043
 
Edwardsiella tarda EIB202
 
Proteus mirabilis HI4320
 
Photorhabdus luminescens subsp. laumondii TTO1
PTS system, galactosamine-specific IID component (EC 2.7.1.69)
agaI
 
Escherichia coli str. K-12 substr. MG1655

Gene: b3141: Galactosamine-6-phosphate isomerase (EC 5.3.1.-)
 
Salmonella typhimurium LT2
 
Citrobacter koseri ATCC BAA-895
 
Klebsiella pneumoniae subsp. pneumoniae MGH 78578
 
Enterobacter sp. 638

Gene: Ent638_3582: Galactosamine-6-phosphate isomerase (EC 5.3.1.-)
 
Erwinia amylovora ATCC 49946
 
Yersinia pestis KIM
 
Serratia proteamaculans 568
 
Erwinia carotovora subsp. atroseptica SCRI1043
 
Edwardsiella tarda EIB202
 
Proteus mirabilis HI4320
 
Photorhabdus luminescens subsp. laumondii TTO1
Galactosamine-6-phosphate isomerase (EC 5.3.1.-)
agaZ
*
Escherichia coli str. K-12 substr. MG1655

Site:
position = -134
score = 5.35272
sequence = CTTTCATTATGTTTC

Site:
position = -90
score = 5.85709
sequence = CTTTCGTTTTATTTT

Site:
position = -229
score = 5.90906
sequence = CTTTCGTTTCATTTC

Gene: b3132: Tagatose-6-phosphate kinase (EC 2.7.1.144)
 
Salmonella typhimurium LT2
*
Citrobacter koseri ATCC BAA-895

Site:
position = -247
score = 5.90906
sequence = CTTTCGTTTCATTTC

Site:
position = -152
score = 5.35272
sequence = CTTTCATTATGTTTC

Site:
position = -108
score = 5.85709
sequence = CTTTCGTTTTATTTT

Gene: CKO_04530: Tagatose-6-phosphate kinase (EC 2.7.1.144)
 
Klebsiella pneumoniae subsp. pneumoniae MGH 78578
*
Enterobacter sp. 638

Site:
position = -90
score = 5.85709
sequence = CTTTCGTTTTATTTT

Site:
position = -230
score = 5.90906
sequence = CTTTCGTTTCATTTC

Site:
position = -134
score = 5.58962
sequence = CTTTCGTTATGTTTC

Gene: Ent638_3572: Tagatose-6-phosphate kinase (EC 2.7.1.144)
 
Erwinia amylovora ATCC 49946
 
Yersinia pestis KIM

Gene: y3217: Tagatose-6-phosphate kinase (EC 2.7.1.144)
 
Serratia proteamaculans 568
 
Erwinia carotovora subsp. atroseptica SCRI1043
 
Edwardsiella tarda EIB202

Gene: ETAE_2537: Tagatose-6-phosphate kinase (EC 2.7.1.144)
 
Proteus mirabilis HI4320

Gene: PMI2140: Tagatose-6-phosphate kinase (EC 2.7.1.144)
 
Photorhabdus luminescens subsp. laumondii TTO1
Tagatose-6-phosphate kinase (EC 2.7.1.144)
agaV
 
Escherichia coli str. K-12 substr. MG1655

Gene: b3133: PTS system, N-acetylgalactosamine-specific IIB component (EC 2.7.1.69)
 
Salmonella typhimurium LT2
 
Citrobacter koseri ATCC BAA-895

Gene: CKO_04531: PTS system, N-acetylgalactosamine-specific IIB component (EC 2.7.1.69)
 
Klebsiella pneumoniae subsp. pneumoniae MGH 78578
 
Enterobacter sp. 638

Gene: Ent638_3573: PTS system, N-acetylgalactosamine-specific IIB component (EC 2.7.1.69)
 
Erwinia amylovora ATCC 49946
 
Yersinia pestis KIM
 
Serratia proteamaculans 568
 
Erwinia carotovora subsp. atroseptica SCRI1043
 
Edwardsiella tarda EIB202
 
Proteus mirabilis HI4320
 
Photorhabdus luminescens subsp. laumondii TTO1
PTS system, N-acetylgalactosamine-specific IIB component (EC 2.7.1.69)
agaW
 
Escherichia coli str. K-12 substr. MG1655
 
Salmonella typhimurium LT2
 
Citrobacter koseri ATCC BAA-895

Gene: CKO_04532: PTS system, N-acetylgalactosamine-specific IIC component (EC 2.7.1.69)
 
Klebsiella pneumoniae subsp. pneumoniae MGH 78578
 
Enterobacter sp. 638

Gene: Ent638_3574: PTS system, N-acetylgalactosamine-specific IIC component (EC 2.7.1.69)
 
Erwinia amylovora ATCC 49946
 
Yersinia pestis KIM
 
Serratia proteamaculans 568
 
Erwinia carotovora subsp. atroseptica SCRI1043
 
Edwardsiella tarda EIB202
 
Proteus mirabilis HI4320
 
Photorhabdus luminescens subsp. laumondii TTO1
PTS system, N-acetylgalactosamine-specific IIC component (EC 2.7.1.69)
agaE
 
Escherichia coli str. K-12 substr. MG1655
 
Salmonella typhimurium LT2
 
Citrobacter koseri ATCC BAA-895

Gene: CKO_04533: PTS system, N-acetylgalactosamine-specific IID component (EC 2.7.1.69)
 
Klebsiella pneumoniae subsp. pneumoniae MGH 78578
 
Enterobacter sp. 638

Gene: Ent638_3575: PTS system, N-acetylgalactosamine-specific IID component (EC 2.7.1.69)
 
Erwinia amylovora ATCC 49946
 
Yersinia pestis KIM
 
Serratia proteamaculans 568
 
Erwinia carotovora subsp. atroseptica SCRI1043
 
Edwardsiella tarda EIB202
 
Proteus mirabilis HI4320
 
Photorhabdus luminescens subsp. laumondii TTO1
PTS system, N-acetylgalactosamine-specific IID component (EC 2.7.1.69)
agaF
 
Escherichia coli str. K-12 substr. MG1655
 
Salmonella typhimurium LT2
 
Citrobacter koseri ATCC BAA-895

Gene: CKO_04534: PTS system, N-acetylgalactosamine- and galactosamine-specific IIA component (EC 2.7.1.69)
 
Klebsiella pneumoniae subsp. pneumoniae MGH 78578
 
Enterobacter sp. 638

Gene: Ent638_3576: PTS system, N-acetylgalactosamine- and galactosamine-specific IIA component (EC 2.7.1.69)
 
Erwinia amylovora ATCC 49946
 
Yersinia pestis KIM
 
Serratia proteamaculans 568
 
Erwinia carotovora subsp. atroseptica SCRI1043
 
Edwardsiella tarda EIB202
 
Proteus mirabilis HI4320
 
Photorhabdus luminescens subsp. laumondii TTO1
PTS system, N-acetylgalactosamine- and galactosamine-specific IIA component (EC 2.7.1.69)
agaA
 
Escherichia coli str. K-12 substr. MG1655
 
Salmonella typhimurium LT2
 
Citrobacter koseri ATCC BAA-895

Gene: CKO_04535: N-acetylgalactosamine-6-phosphate deacetylase (EC 3.5.1.25)
 
Klebsiella pneumoniae subsp. pneumoniae MGH 78578
 
Enterobacter sp. 638
 
Erwinia amylovora ATCC 49946
 
Yersinia pestis KIM

Gene: y3223: N-acetylgalactosamine-6-phosphate deacetylase (EC 3.5.1.25)
 
Serratia proteamaculans 568
 
Erwinia carotovora subsp. atroseptica SCRI1043
 
Edwardsiella tarda EIB202

Gene: ETAE_2531: N-acetylgalactosamine-6-phosphate deacetylase (EC 3.5.1.25)
 
Proteus mirabilis HI4320

Gene: PMI2134: N-acetylgalactosamine-6-phosphate deacetylase (EC 3.5.1.25)
 
Photorhabdus luminescens subsp. laumondii TTO1
N-acetylgalactosamine-6-phosphate deacetylase (EC 3.5.1.25)
 
CRON 2.
agaR
*
Escherichia coli str. K-12 substr. MG1655

Site:
position = -34
score = -1.07232
sequence = GAAATGAAACGAAAG

Gene: b3131: Transcriptional repressor of N-acetylgalactosamine utilization, DeoR family
 
Salmonella typhimurium LT2
*
Citrobacter koseri ATCC BAA-895

Site:
position = -35
score = -1.07232
sequence = GAAATGAAACGAAAG

Gene: CKO_04529: Transcriptional repressor of N-acetylgalactosamine utilization, DeoR family
 
Klebsiella pneumoniae subsp. pneumoniae MGH 78578
*
Enterobacter sp. 638

Site:
position = -35
score = -1.07232
sequence = GAAATGAAACGAAAG

Gene: Ent638_3571: Transcriptional repressor of N-acetylgalactosamine utilization, DeoR family
 
Erwinia amylovora ATCC 49946
 
Yersinia pestis KIM

Gene: y3216: Transcriptional repressor of N-acetylgalactosamine utilization, DeoR family
 
Serratia proteamaculans 568
 
Erwinia carotovora subsp. atroseptica SCRI1043
 
Edwardsiella tarda EIB202
 
Proteus mirabilis HI4320

Gene: PMI2141: Transcriptional repressor of N-acetylgalactosamine utilization, DeoR family
 
Photorhabdus luminescens subsp. laumondii TTO1
Transcriptional repressor of N-acetylgalactosamine utilization, DeoR family
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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