Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog LmrA - Bacillales

Properties
Regulator type: Transcription factor
Regulator family: TetR
Regulation mode: repressor
Biological process: Multidrug resistance
Effector: Quercetin; Fisetin; Catechin
Phylum: Firmicutes
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 5 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Bacillus subtilis subsp. subtilis str. 168 5 3
Bacillus amyloliquefaciens FZB42 2 1
Bacillus pumilus SAFR-032
Bacillus licheniformis DSM 13
Anoxybacillus flavithermus WK1
Geobacillus kaustophilus HTA426
Bacillus cereus ATCC 14579
Bacillus halodurans C-125
Bacillus clausii KSM-K16
Oceanobacillus iheyensis HTE831
Paenibacillus sp. JDR-2
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
yxaG
*
Bacillus subtilis subsp. subtilis str. 168

Site:
position = -65
score = 5.25078
sequence = TATAGAACGGTCTAGA

Site:
position = -33
score = 5.50344
sequence = TATAGACTGGTCTAAA

Gene: BSU39980: Quercetin 2,3-dioxygenase
 
Bacillus amyloliquefaciens FZB42
 
Bacillus pumilus SAFR-032

Gene: BPUM_0236: Quercetin 2,3-dioxygenase
 
Bacillus licheniformis DSM 13
 
Anoxybacillus flavithermus WK1
 
Geobacillus kaustophilus HTA426
 
Bacillus cereus ATCC 14579
 
Bacillus halodurans C-125
 
Bacillus clausii KSM-K16
 
Oceanobacillus iheyensis HTE831
 
Paenibacillus sp. JDR-2
Quercetin 2,3-dioxygenase
qodI
 
Bacillus subtilis subsp. subtilis str. 168

Gene: BSU39970: Putative transporter
 
Bacillus amyloliquefaciens FZB42
 
Bacillus pumilus SAFR-032
 
Bacillus licheniformis DSM 13
 
Anoxybacillus flavithermus WK1
 
Geobacillus kaustophilus HTA426
 
Bacillus cereus ATCC 14579
 
Bacillus halodurans C-125

Gene: BH0756: Putative transporter
 
Bacillus clausii KSM-K16
 
Oceanobacillus iheyensis HTE831
 
Paenibacillus sp. JDR-2
Putative transporter
 
CRON 2.
lmrA
*
Bacillus subtilis subsp. subtilis str. 168

Site:
position = -51
score = 5.20281
sequence = AATAGACCAGTCACTA

Gene: BSU02680: Transcriptional repressor of multidrug resistance regulon, TetR family
*
Bacillus amyloliquefaciens FZB42

Site:
position = -55
score = 5.20281
sequence = AATAGACCAGTCACTA

Gene: RBAM_002990: Transcriptional repressor of multidrug resistance regulon, TetR family
 
Bacillus pumilus SAFR-032
 
Bacillus licheniformis DSM 13
 
Anoxybacillus flavithermus WK1
 
Geobacillus kaustophilus HTA426
 
Bacillus cereus ATCC 14579
 
Bacillus halodurans C-125
 
Bacillus clausii KSM-K16
 
Oceanobacillus iheyensis HTE831
 
Paenibacillus sp. JDR-2
Transcriptional repressor of multidrug resistance regulon, TetR family
lmrB
 
Bacillus subtilis subsp. subtilis str. 168

Gene: BSU02670: Lincomycin resistant protein
 
Bacillus amyloliquefaciens FZB42

Gene: RBAM_002980: Lincomycin resistant protein
 
Bacillus pumilus SAFR-032

Gene: BPUM_0465: Lincomycin resistant protein
 
Bacillus licheniformis DSM 13

Gene: BLi01310: Lincomycin resistant protein
 
Anoxybacillus flavithermus WK1
 
Geobacillus kaustophilus HTA426
 
Bacillus cereus ATCC 14579
 
Bacillus halodurans C-125
 
Bacillus clausii KSM-K16
 
Oceanobacillus iheyensis HTE831
 
Paenibacillus sp. JDR-2
Lincomycin resistant protein
qdoR
*
Bacillus subtilis subsp. subtilis str. 168

Site:
position = -40
score = 2.40751
sequence = TATATAAGTCGCTCTA

Gene: BSU39990: Transcriptional regulator of multidrug resistance regulon, TetR family
 
Bacillus amyloliquefaciens FZB42

Gene: RBAM_032230: Transcriptional regulator of multidrug resistance regulon, TetR family
 
Bacillus pumilus SAFR-032

Gene: BPUM_0235: Transcriptional regulator of multidrug resistance regulon, TetR family
 
Bacillus licheniformis DSM 13

Gene: BLi01311: Transcriptional regulator of multidrug resistance regulon, TetR family
 
Anoxybacillus flavithermus WK1
 
Geobacillus kaustophilus HTA426
 
Bacillus cereus ATCC 14579
 
Bacillus halodurans C-125
 
Bacillus clausii KSM-K16
 
Oceanobacillus iheyensis HTE831
 
Paenibacillus sp. JDR-2
Transcriptional regulator of multidrug resistance regulon, TetR family
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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