Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog GmuR - Bacillales

Properties
Regulator type: Transcription factor
Regulator family: GntR/Others
Regulation mode: repressor
Biological process: Glucomannan utilization
Effector:
Phylum: Firmicutes
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 6 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Bacillus subtilis subsp. subtilis str. 168 8 1
Bacillus amyloliquefaciens FZB42 7 1
Bacillus pumilus SAFR-032 5 1
Bacillus licheniformis DSM 13 6 1
Anoxybacillus flavithermus WK1
Geobacillus kaustophilus HTA426 5 1
Bacillus cereus ATCC 14579
Bacillus halodurans C-125 6 1
Bacillus clausii KSM-K16
Oceanobacillus iheyensis HTE831
Paenibacillus sp. JDR-2
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
gmuB
*
Bacillus subtilis subsp. subtilis str. 168

Site:
position = -74
score = 6.88117
sequence = TAAAAGTATAGACATTTA

Gene: BSU05810: Glucomannan-related PTS system, IIB component (EC 2.7.1.69)
*
Bacillus amyloliquefaciens FZB42

Site:
position = -78
score = 6.88117
sequence = TAAAAGTATAGACATTTA

Gene: RBAM_035870: Glucomannan-related PTS system, IIB component (EC 2.7.1.69)
*
Bacillus pumilus SAFR-032

Site:
position = -78
score = 6.88117
sequence = TAAATGTCTAGACATTTA

Gene: BPUM_2121: Glucomannan-related PTS system, IIB component (EC 2.7.1.69)
*
Bacillus licheniformis DSM 13

Site:
position = -79
score = 6.88117
sequence = TAAATGTCTAGACATTTA

Gene: BLi02564: Glucomannan-related PTS system, IIB component (EC 2.7.1.69)
 
Anoxybacillus flavithermus WK1
*
Geobacillus kaustophilus HTA426

Site:
position = -91
score = 6.07636
sequence = TAAATGACTAGACAAATA

Gene: GK1859: Glucomannan-related PTS system, IIB component (EC 2.7.1.69)
 
Bacillus cereus ATCC 14579
*
Bacillus halodurans C-125

Site:
position = -81
score = 6.88117
sequence = TAAAAGTATAGACATTTA

Gene: BH3921: Glucomannan-related PTS system, IIB component (EC 2.7.1.69)
 
Bacillus clausii KSM-K16

Gene: ABC0481: Glucomannan-related PTS system, IIB component (EC 2.7.1.69)
 
Oceanobacillus iheyensis HTE831

Gene: OB2760: Glucomannan-related PTS system, IIB component (EC 2.7.1.69)
 
Paenibacillus sp. JDR-2
Glucomannan-related PTS system, IIB component (EC 2.7.1.69)
gmuA
 
Bacillus subtilis subsp. subtilis str. 168

Gene: BSU05820: Glucomannan-related PTS system, IIA component (EC 2.7.1.69)
 
Bacillus amyloliquefaciens FZB42

Gene: RBAM_035880: Glucomannan-related PTS system, IIA component (EC 2.7.1.69)
 
Bacillus pumilus SAFR-032

Gene: BPUM_2120: Glucomannan-related PTS system, IIA component (EC 2.7.1.69)
 
Bacillus licheniformis DSM 13

Gene: BLi02563: Glucomannan-related PTS system, IIA component (EC 2.7.1.69)
 
Anoxybacillus flavithermus WK1
 
Geobacillus kaustophilus HTA426

Gene: GK1858: Glucomannan-related PTS system, IIA component (EC 2.7.1.69)
 
Bacillus cereus ATCC 14579
 
Bacillus halodurans C-125

Gene: BH3920: Glucomannan-related PTS system, IIA component (EC 2.7.1.69)
 
Bacillus clausii KSM-K16
 
Oceanobacillus iheyensis HTE831
 
Paenibacillus sp. JDR-2
Glucomannan-related PTS system, IIA component (EC 2.7.1.69)
gmuC
 
Bacillus subtilis subsp. subtilis str. 168

Gene: BSU05830: Glucomannan-related PTS system, IIC component (EC 2.7.1.69)
 
Bacillus amyloliquefaciens FZB42

Gene: RBAM_035890: Glucomannan-related PTS system, IIC component (EC 2.7.1.69)
 
Bacillus pumilus SAFR-032

Gene: BPUM_2119: Glucomannan-related PTS system, IIC component (EC 2.7.1.69)
 2
Bacillus licheniformis DSM 13

Gene: BLi02561: Glucomannan-related PTS system, IIC component (EC 2.7.1.69)

Gene: BLi02562: Glucomannan-related PTS system, IIC component (EC 2.7.1.69)
 
Anoxybacillus flavithermus WK1
 
Geobacillus kaustophilus HTA426

Gene: GK1857: Glucomannan-related PTS system, IIC component (EC 2.7.1.69)
 
Bacillus cereus ATCC 14579
 
Bacillus halodurans C-125

Gene: BH3919: Glucomannan-related PTS system, IIC component (EC 2.7.1.69)
 
Bacillus clausii KSM-K16

Gene: ABC0482: Glucomannan-related PTS system, IIC component (EC 2.7.1.69)
 2
Oceanobacillus iheyensis HTE831

Gene: OB2761: Glucomannan-related PTS system, IIC component (EC 2.7.1.69)

Gene: OB0781: Glucomannan-related PTS system, IIC component (EC 2.7.1.69)
 
Paenibacillus sp. JDR-2
Glucomannan-related PTS system, IIC component (EC 2.7.1.69)
gmuD
 
Bacillus subtilis subsp. subtilis str. 168

Gene: BSU05840: 6-phospho-beta-glucosidase
 
Bacillus amyloliquefaciens FZB42

Gene: RBAM_035900: 6-phospho-beta-glucosidase
 
Bacillus pumilus SAFR-032

Gene: BPUM_2118: 6-phospho-beta-glucosidase
 
Bacillus licheniformis DSM 13

Gene: BLi02560: 6-phospho-beta-glucosidase
 
Anoxybacillus flavithermus WK1
 
Geobacillus kaustophilus HTA426

Gene: GK1856: 6-phospho-beta-glucosidase
 
Bacillus cereus ATCC 14579
 
Bacillus halodurans C-125

Gene: BH3918: 6-phospho-beta-glucosidase
 
Bacillus clausii KSM-K16

Gene: ABC0315: 6-phospho-beta-glucosidase
 
Oceanobacillus iheyensis HTE831
 
Paenibacillus sp. JDR-2
6-phospho-beta-glucosidase
gmuR
 
Bacillus subtilis subsp. subtilis str. 168

Gene: BSU05850: Transcriptional regulator of glucomannan utilization, GntR family
 
Bacillus amyloliquefaciens FZB42

Gene: RBAM_006170: Transcriptional regulator of glucomannan utilization, GntR family
 
Bacillus pumilus SAFR-032

Gene: BPUM_2117: Transcriptional regulator of glucomannan utilization, GntR family
 
Bacillus licheniformis DSM 13

Gene: BLi02559: Transcriptional regulator of glucomannan utilization, GntR family
 
Anoxybacillus flavithermus WK1
 
Geobacillus kaustophilus HTA426

Gene: GK1855: Transcriptional regulator of glucomannan utilization, GntR family
 
Bacillus cereus ATCC 14579
 
Bacillus halodurans C-125

Gene: BH3917: Transcriptional regulator of glucomannan utilization, GntR family
 
Bacillus clausii KSM-K16
 
Oceanobacillus iheyensis HTE831
 
Paenibacillus sp. JDR-2
Transcriptional regulator of glucomannan utilization, GntR family
gmuE
 
Bacillus subtilis subsp. subtilis str. 168

Gene: BSU05860: Predicted mannokinase (EC 2.7.1.7)
 
Bacillus amyloliquefaciens FZB42

Gene: RBAM_035910: Predicted mannokinase (EC 2.7.1.7)
 
Bacillus pumilus SAFR-032

Gene: BPUM_3005: Predicted mannokinase (EC 2.7.1.7)
 
Bacillus licheniformis DSM 13

Gene: BLi03529: Predicted mannokinase (EC 2.7.1.7)
 
Anoxybacillus flavithermus WK1
 
Geobacillus kaustophilus HTA426
 
Bacillus cereus ATCC 14579
 
Bacillus halodurans C-125
 
Bacillus clausii KSM-K16
 
Oceanobacillus iheyensis HTE831
 
Paenibacillus sp. JDR-2
Predicted mannokinase (EC 2.7.1.7)
gmuF
 
Bacillus subtilis subsp. subtilis str. 168

Gene: BSU05870: Mannose-6-phosphate isomerase (EC 5.3.1.8)
 
Bacillus amyloliquefaciens FZB42

Gene: RBAM_035920: Mannose-6-phosphate isomerase (EC 5.3.1.8)
 
Bacillus pumilus SAFR-032
 
Bacillus licheniformis DSM 13
 
Anoxybacillus flavithermus WK1
 
Geobacillus kaustophilus HTA426
 
Bacillus cereus ATCC 14579
 
Bacillus halodurans C-125

Gene: BH3916: Mannose-6-phosphate isomerase (EC 5.3.1.8)
 
Bacillus clausii KSM-K16
 
Oceanobacillus iheyensis HTE831
 
Paenibacillus sp. JDR-2
Mannose-6-phosphate isomerase (EC 5.3.1.8)
gmuG
 
Bacillus subtilis subsp. subtilis str. 168

Gene: BSU05880: Mannan endo-1,4-beta-mannosidase precursor (EC 3.2.1.78)
 
Bacillus amyloliquefaciens FZB42

Gene: RBAM_035930: Mannan endo-1,4-beta-mannosidase precursor (EC 3.2.1.78)
 
Bacillus pumilus SAFR-032
 
Bacillus licheniformis DSM 13

Gene: BLi00735: Mannan endo-1,4-beta-mannosidase precursor (EC 3.2.1.78)
 
Anoxybacillus flavithermus WK1
 
Geobacillus kaustophilus HTA426
 
Bacillus cereus ATCC 14579
 
Bacillus halodurans C-125
 
Bacillus clausii KSM-K16
 
Oceanobacillus iheyensis HTE831
 
Paenibacillus sp. JDR-2
Mannan endo-1,4-beta-mannosidase precursor (EC 3.2.1.78)
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD