Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog DeoR - Enterobacteriales

Properties
Regulator type: Transcription factor
Regulator family: DeoR
Regulation mode: repressor
Biological process: Deoxyribonucleoside utilization
Effector:
Phylum: Proteobacteria/gamma
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 34 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Escherichia coli str. K-12 substr. MG1655 7 4
Salmonella typhimurium LT2 5 3
Citrobacter koseri ATCC BAA-895 5 2
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 5 2
Enterobacter sp. 638 5 2
Erwinia amylovora ATCC 49946 5 2
Yersinia pestis KIM 1 1
Serratia proteamaculans 568 2 1
Erwinia carotovora subsp. atroseptica SCRI1043 7 3
Edwardsiella tarda EIB202 5 2
Proteus mirabilis HI4320 7 3
Photorhabdus luminescens subsp. laumondii TTO1
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
tsx
*
Escherichia coli str. K-12 substr. MG1655

Site:
position = -247
score = 4.51638
sequence = TGTTACTCTGCTTACA

Gene: b0411: nucleoside-specific channel-forming protein
*
Salmonella typhimurium LT2

Site:
position = -248
score = 4.40195
sequence = TGTTGCCCTACTGACA

Gene: STM0413: nucleoside-specific channel-forming protein
 
Citrobacter koseri ATCC BAA-895

Gene: CKO_02750: nucleoside-specific channel-forming protein
 
Klebsiella pneumoniae subsp. pneumoniae MGH 78578

Gene: KPN_00363: nucleoside-specific channel-forming protein
 
Enterobacter sp. 638

Gene: Ent638_0879: nucleoside-specific channel-forming protein
*
Erwinia amylovora ATCC 49946

Site:
position = -215
score = 4.88172
sequence = TGTGATAAAAATCACA

Gene: EAM_2589: nucleoside-specific channel-forming protein
 
Yersinia pestis KIM
 
Serratia proteamaculans 568

Gene: Spro_2072: nucleoside-specific channel-forming protein
*
Erwinia carotovora subsp. atroseptica SCRI1043

Site:
position = -169
score = 4.68612
sequence = TGTGATTAAAATCACA

Gene: ECA3796: nucleoside-specific channel-forming protein
 
Edwardsiella tarda EIB202

Gene: ETAE_2935: nucleoside-specific channel-forming protein
 
Proteus mirabilis HI4320
 
Photorhabdus luminescens subsp. laumondii TTO1
nucleoside-specific channel-forming protein
 
CRON 2.
nupG
*
Escherichia coli str. K-12 substr. MG1655

Site:
position = -163
score = 4.85411
sequence = TGTTATCCACATCACA

Site:
position = -78
score = 4.55113
sequence = TGATAGAATCCCATCA

Gene: b2964: nucleoside transporter, MFS family
*
Salmonella typhimurium LT2

Site:
position = -78
score = 4.6216
sequence = TGATAGAATCACACCA

Gene: STM3113: nucleoside transporter, MFS family
*
Citrobacter koseri ATCC BAA-895

Site:
position = -78
score = 4.6216
sequence = TGATAGAATCACATCA

Gene: CKO_04339: nucleoside transporter, MFS family
*
Klebsiella pneumoniae subsp. pneumoniae MGH 78578

Site:
position = -46
score = 4.82611
sequence = TGTTATTTTAAAAACA

Gene: KPN_03396: nucleoside transporter, MFS family
*
Enterobacter sp. 638

Site:
position = -46
score = 4.49251
sequence = TGTTTACAAAACAACA

Gene: Ent638_3369: nucleoside transporter, MFS family
 
Erwinia amylovora ATCC 49946
 
Yersinia pestis KIM
 
Serratia proteamaculans 568
 
Erwinia carotovora subsp. atroseptica SCRI1043
 
Edwardsiella tarda EIB202

Gene: ETAE_2985: nucleoside transporter, MFS family
 
Proteus mirabilis HI4320
 
Photorhabdus luminescens subsp. laumondii TTO1
nucleoside transporter, MFS family
 
CRON 3.
deoC
*
Escherichia coli str. K-12 substr. MG1655

Site:
position = -60
score = 5.96514
sequence = TGTTAGAATACTAACA

Gene: b4381: deoxyribose-phosphate aldolase
*
Salmonella typhimurium LT2

Site:
position = -44
score = 5.63866
sequence = TGTTAGAATATTAACA

Gene: STM4567: deoxyribose-phosphate aldolase
*
Citrobacter koseri ATCC BAA-895

Site:
position = -45
score = 5.96514
sequence = TGTTAGAATACTAACA

Gene: CKO_03410: deoxyribose-phosphate aldolase
*
Klebsiella pneumoniae subsp. pneumoniae MGH 78578

Site:
position = -69
score = 5.38679
sequence = TGTTACAATAGTAACA

Site:
position = -246
score = 5.73899
sequence = TGTTAGAATTATCACA

Gene: KPN_04837: deoxyribose-phosphate aldolase
*
Enterobacter sp. 638

Site:
position = -62
score = 5.91567
sequence = TGTTAGAATACTCACA

Gene: Ent638_0541: deoxyribose-phosphate aldolase
*
Erwinia amylovora ATCC 49946

Site:
position = -230
score = 4.93679
sequence = TGTGATAATTCTAACA

Site:
position = -78
score = 5.66406
sequence = TGTTATAATCCTCACA

Gene: EAM_0615: deoxyribose-phosphate aldolase
 
Yersinia pestis KIM

Gene: y3743: deoxyribose-phosphate aldolase
 
Serratia proteamaculans 568

Gene: Spro_0660: deoxyribose-phosphate aldolase
*
Erwinia carotovora subsp. atroseptica SCRI1043

Site:
position = -185
score = 5.42423
sequence = TGTTGAAATAATCACA

Gene: ECA0727: deoxyribose-phosphate aldolase
*
Edwardsiella tarda EIB202

Site:
position = -104
score = 5.32346
sequence = TGTTCAAATAATCACA

Gene: ETAE_0486: deoxyribose-phosphate aldolase
*
Proteus mirabilis HI4320

Site:
position = -302
score = 4.28324
sequence = TGTGATTCTGATCACA

Site:
position = -259
score = 4.03876
sequence = TTTTATTATTGTGACA

Gene: PMI2416: deoxyribose-phosphate aldolase
 
Photorhabdus luminescens subsp. laumondii TTO1
deoxyribose-phosphate aldolase
deoA
 
Escherichia coli str. K-12 substr. MG1655

Gene: b4382: thymidine phosphorylase
 
Salmonella typhimurium LT2

Gene: STM4568: thymidine phosphorylase
 
Citrobacter koseri ATCC BAA-895

Gene: CKO_03409: thymidine phosphorylase
 
Klebsiella pneumoniae subsp. pneumoniae MGH 78578

Gene: KPN_04838: thymidine phosphorylase
 
Enterobacter sp. 638

Gene: Ent638_0542: thymidine phosphorylase
 
Erwinia amylovora ATCC 49946

Gene: EAM_0616: thymidine phosphorylase
 
Yersinia pestis KIM
 
Serratia proteamaculans 568

Gene: Spro_0661: thymidine phosphorylase
 
Erwinia carotovora subsp. atroseptica SCRI1043

Gene: ECA0728: thymidine phosphorylase
 
Edwardsiella tarda EIB202

Gene: ETAE_0487: thymidine phosphorylase
 
Proteus mirabilis HI4320

Gene: PMI2415: thymidine phosphorylase
 
Photorhabdus luminescens subsp. laumondii TTO1
thymidine phosphorylase
deoB
 
Escherichia coli str. K-12 substr. MG1655

Gene: b4383: phosphopentomutase
 
Salmonella typhimurium LT2

Gene: STM4569: phosphopentomutase
 
Citrobacter koseri ATCC BAA-895

Gene: CKO_03408: phosphopentomutase
 
Klebsiella pneumoniae subsp. pneumoniae MGH 78578

Gene: KPN_04839: phosphopentomutase
 
Enterobacter sp. 638

Gene: Ent638_0543: phosphopentomutase
 
Erwinia amylovora ATCC 49946

Gene: EAM_0617: phosphopentomutase
 
Yersinia pestis KIM

Gene: y3741: phosphopentomutase
 
Serratia proteamaculans 568

Gene: Spro_0662: phosphopentomutase
 
Erwinia carotovora subsp. atroseptica SCRI1043

Gene: ECA0729: phosphopentomutase
 
Edwardsiella tarda EIB202

Gene: ETAE_0488: phosphopentomutase
 
Proteus mirabilis HI4320

Gene: PMI2414: phosphopentomutase
 
Photorhabdus luminescens subsp. laumondii TTO1

Gene: plu0521: phosphopentomutase
phosphopentomutase
deoD
 
Escherichia coli str. K-12 substr. MG1655

Gene: b4384: purine-nucleoside phosphorylase
 
Salmonella typhimurium LT2

Gene: STM4570: purine-nucleoside phosphorylase
 
Citrobacter koseri ATCC BAA-895

Gene: CKO_03407: purine-nucleoside phosphorylase
 
Klebsiella pneumoniae subsp. pneumoniae MGH 78578

Gene: KPN_04840: purine-nucleoside phosphorylase
 
Enterobacter sp. 638

Gene: Ent638_0544: purine-nucleoside phosphorylase
 
Erwinia amylovora ATCC 49946

Gene: EAM_0618: purine-nucleoside phosphorylase
 
Yersinia pestis KIM

Gene: y3740: purine-nucleoside phosphorylase
 
Serratia proteamaculans 568

Gene: Spro_0663: purine-nucleoside phosphorylase
 
Erwinia carotovora subsp. atroseptica SCRI1043

Gene: ECA0730: purine-nucleoside phosphorylase
 
Edwardsiella tarda EIB202

Gene: ETAE_0489: purine-nucleoside phosphorylase
 
Proteus mirabilis HI4320

Gene: PMI2413: purine-nucleoside phosphorylase
 
Photorhabdus luminescens subsp. laumondii TTO1

Gene: plu0522: purine-nucleoside phosphorylase
purine-nucleoside phosphorylase
 
CRON 4.
deoC2
 
Escherichia coli str. K-12 substr. MG1655
 
Salmonella typhimurium LT2
 
Citrobacter koseri ATCC BAA-895
 
Klebsiella pneumoniae subsp. pneumoniae MGH 78578
 
Enterobacter sp. 638
 
Erwinia amylovora ATCC 49946
*
Yersinia pestis KIM

Site:
position = -44
score = 5.26692
sequence = TGTTATGATTATCACA

Site:
position = -105
score = 4.25663
sequence = TGTAATTTAAATAACA

Gene: y2860: deoxyribose-phosphate aldolase
*
Serratia proteamaculans 568

Site:
position = -59
score = 5.46638
sequence = TGTTATTATTCTAACA

Site:
position = -165
score = 4.78595
sequence = TGTTACTTAAATAACA

Gene: Spro_1632: deoxyribose-phosphate aldolase
*
Erwinia carotovora subsp. atroseptica SCRI1043

Site:
position = -79
score = 4.285
sequence = TGTTATTTTTGTGACA

Site:
position = -109
score = 5.46077
sequence = TGTTATTAAAATAACA

Gene: ECA2684: deoxyribose-phosphate aldolase
 
Edwardsiella tarda EIB202
*
Proteus mirabilis HI4320

Site:
position = -54
score = 4.7647
sequence = TGTTGCCAAACTAACA

Site:
position = -105
score = 4.47725
sequence = TGTTATTTAAATATCA

Site:
position = -146
score = 5.36348
sequence = TGTTAGAATAGTTACA

Gene: PMI3512: deoxyribose-phosphate aldolase
 
Photorhabdus luminescens subsp. laumondii TTO1
deoxyribose-phosphate aldolase
deoR
 
Escherichia coli str. K-12 substr. MG1655

Gene: b0840: transcriptional repressor for deoxyribose operon
 
Salmonella typhimurium LT2

Gene: STM0864: transcriptional repressor for deoxyribose operon
 
Citrobacter koseri ATCC BAA-895

Gene: CKO_02269: transcriptional repressor for deoxyribose operon
 
Klebsiella pneumoniae subsp. pneumoniae MGH 78578

Gene: KPN_00872: transcriptional repressor for deoxyribose operon
 
Enterobacter sp. 638

Gene: Ent638_1331: transcriptional repressor for deoxyribose operon
 
Erwinia amylovora ATCC 49946

Gene: EAM_0630: transcriptional repressor for deoxyribose operon
 
Yersinia pestis KIM

Gene: y2861: transcriptional repressor for deoxyribose operon
 
Serratia proteamaculans 568

Gene: Spro_1631: transcriptional repressor for deoxyribose operon
 
Erwinia carotovora subsp. atroseptica SCRI1043

Gene: ECA2685: transcriptional repressor for deoxyribose operon
 
Edwardsiella tarda EIB202

Gene: ETAE_2261: transcriptional repressor for deoxyribose operon
 
Proteus mirabilis HI4320

Gene: PMI3511: transcriptional repressor for deoxyribose operon
 
Photorhabdus luminescens subsp. laumondii TTO1
transcriptional repressor for deoxyribose operon
 
CRON 5.
nupC
*
Escherichia coli str. K-12 substr. MG1655

Site:
position = -180
score = 4.42643
sequence = TGTTAGCACATTTACA

Gene: b2393: nucleoside transporter, NUP family
 
Salmonella typhimurium LT2

Gene: STM2409: nucleoside transporter, NUP family
 
Citrobacter koseri ATCC BAA-895

Gene: CKO_00402: nucleoside transporter, NUP family
 
Klebsiella pneumoniae subsp. pneumoniae MGH 78578
 
Enterobacter sp. 638

Gene: Ent638_2927: nucleoside transporter, NUP family
 
Erwinia amylovora ATCC 49946

Gene: EAM_2379: nucleoside transporter, NUP family
 
Yersinia pestis KIM
 2
Serratia proteamaculans 568

Gene: Spro_4861: nucleoside transporter, NUP family

Gene: Spro_3416: nucleoside transporter, NUP family
 
Erwinia carotovora subsp. atroseptica SCRI1043

Gene: ECA3183: nucleoside transporter, NUP family
*
Edwardsiella tarda EIB202

Site:
position = -234
score = 4.50172
sequence = TGCTATGCTAATCACA

Gene: ETAE_1141: nucleoside transporter, NUP family
*
Proteus mirabilis HI4320

Site:
position = -77
score = 5.00908
sequence = TGTGACAATAATCACA

Gene: PMI1822: nucleoside transporter, NUP family
 
Photorhabdus luminescens subsp. laumondii TTO1

Gene: plu1399: nucleoside transporter, NUP family
nucleoside transporter, NUP family
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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