Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog NrdR - Cyanobacteria

Properties
Regulator type: Transcription factor
Regulator family: NrdR
Regulation mode: repressor
Biological process: Deoxyribonucleotide biosynthesis
Effector: Deoxyribonucleotides
Phylum: Cyanobacteria
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 8 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Synechococcus sp. PCC 7002
Synechocystis sp. PCC 6803
Cyanothece sp. ATCC 51142
Cyanothece sp. PCC 8801
Cyanothece sp. PCC 7425
Microcystis aeruginosa NIES-843
Nostoc sp. PCC 7120
Trichodesmium erythraeum IMS101
Synechococcus elongatus PCC 7942 1 1
Prochlorococcus marinus str. MIT 9313 1 1
Synechococcus sp. JA-3-3Ab
Synechococcus sp. WH 8102 1 1
Gloeobacter violaceus PCC 7421 1 1
Thermosynechococcus elongatus BP-1 1 1
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
nrdJ
 
Synechococcus sp. PCC 7002
 
Synechocystis sp. PCC 6803
 
Cyanothece sp. ATCC 51142
 
Cyanothece sp. PCC 8801
 
Cyanothece sp. PCC 7425
 
Microcystis aeruginosa NIES-843
 
Nostoc sp. PCC 7120

Gene: all4035: ribonucleotide reductase (Class II)
 
Trichodesmium erythraeum IMS101
*
Synechococcus elongatus PCC 7942

Site:
position = -44
score = 4.03291
sequence = ACTCCATCCCTAGTGT

Gene: Synpcc7942_1609: ribonucleotide reductase (Class II)
*
Prochlorococcus marinus str. MIT 9313

Site:
position = -9
score = 4.99699
sequence = GCACTGTCGATGGTGT

Site:
position = 20
score = 3.91037
sequence = ACACcATgagTgGcGg

Gene: PMT0793: ribonucleotide reductase (Class II)
 
Synechococcus sp. JA-3-3Ab

Gene: CYA_2169: ribonucleotide reductase (Class II)
*
Synechococcus sp. WH 8102

Site:
position = -81
score = 4.88709
sequence = ACACTGCCAATGGTGG

Site:
position = -47
score = 3.39489
sequence = cCcCcATCtgTgGcGT

Gene: SYNW1147: ribonucleotide reductase (Class II)
*
Gloeobacter violaceus PCC 7421

Site:
position = -70
score = 3.60465
sequence = GATCTACCCATGGTGT

Site:
position = -40
score = 3.97589
sequence = CCACAGTCGGCAGTTG

Gene: gll3966: ribonucleotide reductase (Class II)
*
Thermosynechococcus elongatus BP-1

Site:
position = -38
score = 3.76369
sequence = ACACTACACCTAGTAT

Gene: tll1327: ribonucleotide reductase (Class II)
ribonucleotide reductase (Class II)
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD