Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog NrdR - Enterobacteriales

Properties
Regulator type: Transcription factor
Regulator family: NrdR
Regulation mode: repressor
Biological process: Ribonucleotide reductases
Effector: Deoxyribonucleotides
Phylum: Proteobacteria/gamma
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 70 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Escherichia coli str. K-12 substr. MG1655 9 3
Salmonella typhimurium LT2 9 3
Citrobacter koseri ATCC BAA-895 9 3
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 8 3
Enterobacter sp. 638 9 3
Erwinia amylovora ATCC 49946 8 3
Yersinia pestis KIM 5 3
Serratia proteamaculans 568 9 3
Erwinia carotovora subsp. atroseptica SCRI1043 9 3
Edwardsiella tarda EIB202 5 2
Proteus mirabilis HI4320 9 3
Photorhabdus luminescens subsp. laumondii TTO1 9 3
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
nrdA
*
Escherichia coli str. K-12 substr. MG1655

Site:
position = -93
score = 5.73596
sequence = CCCCTATATATAGTGT

Site:
position = -62
score = 3.52449
sequence = GTACTACAGGTAGTCT

Gene: b2234: Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)
*
Salmonella typhimurium LT2

Site:
position = -136
score = 3.68962
sequence = ACTCACCATATAGCGT

Site:
position = -104
score = 5.82924
sequence = CCCCTATATATAGTAT

Gene: STM2277: Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)
*
Citrobacter koseri ATCC BAA-895

Site:
position = -127
score = 3.68962
sequence = ACTCACCATATAGCGT

Site:
position = -95
score = 5.82924
sequence = CCCCTATATATAGTAT

Gene: CKO_00541: Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)
*
Klebsiella pneumoniae subsp. pneumoniae MGH 78578

Site:
position = -125
score = 3.68962
sequence = ACTCACCATATAGCGT

Site:
position = -93
score = 5.77825
sequence = CCCCTACATATAGTAT

Gene: KPN_02642: Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)
*
Enterobacter sp. 638

Site:
position = -130
score = 3.68962
sequence = ACTCACCATATAGCGT

Site:
position = -98
score = 5.61466
sequence = CCCCTATATGTAGTAT

Gene: Ent638_2801: Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)
*
Erwinia amylovora ATCC 49946

Site:
position = -96
score = 3.22852
sequence = ACCCCCTATATGTTGT

Site:
position = -94
score = 5.40602
sequence = CCCCTATATGTTGTGT

Gene: EAM_2266: Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)
*
Yersinia pestis KIM

Site:
position = -132
score = 5.52356
sequence = CCACTATATATTGTGT

Site:
position = -165
score = 3.03789
sequence = ACTCACTATCTTGTTA

Gene: y2974: Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)
*
Serratia proteamaculans 568

Site:
position = -83
score = 3.22376
sequence = AACCCCTATATATAGT

Site:
position = -81
score = 5.73596
sequence = CCCCTATATATAGTGT

Gene: Spro_3271: Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)
*
Erwinia carotovora subsp. atroseptica SCRI1043

Site:
position = -129
score = 3.57936
sequence = ACTCACCATGTAGTAG

Site:
position = -98
score = 5.62973
sequence = CACCTATATCTAGTAT

Gene: ECA1199: Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)
*
Edwardsiella tarda EIB202

Site:
position = -126
score = 3.26091
sequence = CAACACTATCTTGTTG

Site:
position = -94
score = 5.62059
sequence = CCCCTATATATTGTGT

Gene: ETAE_2338: Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)
*
Proteus mirabilis HI4320

Site:
position = -169
score = 3.28062
sequence = TACCATTATCTTGTTA

Site:
position = -137
score = 5.62059
sequence = CCCCTATATATTGTGT

Gene: PMI1734: Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)
*
Photorhabdus luminescens subsp. laumondii TTO1

Site:
position = -178
score = 3.18358
sequence = TAACATTATCTTGTTG

Site:
position = -146
score = 5.5696
sequence = CCCCTACATATTGTGT

Gene: plu3052: Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)
Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)
nrdB
 
Escherichia coli str. K-12 substr. MG1655

Gene: b2235: Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1)
 
Salmonella typhimurium LT2

Gene: STM2278: Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1)
 
Citrobacter koseri ATCC BAA-895

Gene: CKO_00540: Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1)
 
Klebsiella pneumoniae subsp. pneumoniae MGH 78578

Gene: KPN_02643: Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1)
 
Enterobacter sp. 638

Gene: Ent638_2802: Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1)
 
Erwinia amylovora ATCC 49946

Gene: EAM_2267: Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1)
 
Yersinia pestis KIM

Gene: y2975: Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1)
 
Serratia proteamaculans 568

Gene: Spro_3272: Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1)
 
Erwinia carotovora subsp. atroseptica SCRI1043

Gene: ECA1198: Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1)
 
Edwardsiella tarda EIB202

Gene: ETAE_2339: Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1)
 
Proteus mirabilis HI4320

Gene: PMI1735: Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1)
 
Photorhabdus luminescens subsp. laumondii TTO1

Gene: plu3053: Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1)
Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1)
yfaE
 
Escherichia coli str. K-12 substr. MG1655

Gene: b2236: ferredoxin
 
Salmonella typhimurium LT2

Gene: STM2279: ferredoxin
 
Citrobacter koseri ATCC BAA-895

Gene: CKO_00539: ferredoxin
 
Klebsiella pneumoniae subsp. pneumoniae MGH 78578

Gene: KPN_02644: ferredoxin
 
Enterobacter sp. 638

Gene: Ent638_2803: ferredoxin
 
Erwinia amylovora ATCC 49946

Gene: EAM_2268: ferredoxin
 
Yersinia pestis KIM

Gene: y2976: ferredoxin
 
Serratia proteamaculans 568

Gene: Spro_3273: ferredoxin
 
Erwinia carotovora subsp. atroseptica SCRI1043

Gene: ECA1197: ferredoxin
 
Edwardsiella tarda EIB202

Gene: ETAE_2340: ferredoxin
 
Proteus mirabilis HI4320

Gene: PMI1736: ferredoxin
 
Photorhabdus luminescens subsp. laumondii TTO1

Gene: plu3054: ferredoxin
ferredoxin
 
CRON 2.
nrdD
*
Escherichia coli str. K-12 substr. MG1655

Site:
position = -208
score = 4.27142
sequence = GCACTATATATAGACT

Site:
position = -177
score = 5.02804
sequence = ACCCAATATGTTGTAT

Gene: b4238: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
*
Salmonella typhimurium LT2

Site:
position = -177
score = 5.02804
sequence = ACCCAATATGTTGTAT

Site:
position = -207
score = 4.53055
sequence = TCACTACATATAGACT

Gene: STM4452: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
*
Citrobacter koseri ATCC BAA-895

Site:
position = -225
score = 4.73366
sequence = TCACTACATATAGAAC

Site:
position = -194
score = 5.02804
sequence = ACCCAATATGTTGTAT

Gene: CKO_03580: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
*
Klebsiella pneumoniae subsp. pneumoniae MGH 78578

Site:
position = -207
score = 4.73366
sequence = TCACTACATATAGAAC

Site:
position = -176
score = 4.96225
sequence = GCCCAACATATTGTAT

Gene: KPN_04646: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
*
Enterobacter sp. 638

Site:
position = -203
score = 4.73366
sequence = TCACTACATATAGAAC

Site:
position = -172
score = 5.06851
sequence = ACCCAACATCTTGTAT

Gene: Ent638_0437: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
*
Erwinia amylovora ATCC 49946

Site:
position = -67
score = 3.049
sequence = ATACCATATATAGATA

Site:
position = -36
score = 3.38075
sequence = GGACTATATGTAGTTG

Gene: EAM_3059: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
*
Yersinia pestis KIM

Site:
position = -142
score = 5.10028
sequence = TACCCATATATAGTGT

Site:
position = -111
score = 4.6707
sequence = CATCTATATGTAGTAG

Gene: y0733: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
*
Serratia proteamaculans 568

Site:
position = -189
score = 4.97841
sequence = TATCTATATATAGTGC

Site:
position = -158
score = 4.90908
sequence = CACCTATATGTAGTAG

Gene: Spro_0525: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
*
Erwinia carotovora subsp. atroseptica SCRI1043

Site:
position = -132
score = 4.40099
sequence = TTTCAATATATAGTGC

Site:
position = -101
score = 5.53124
sequence = TACCTACATATAGTGT

Gene: ECA0375: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
*
Edwardsiella tarda EIB202

Site:
position = -156
score = 4.83603
sequence = TTCCCATATATAGTGT

Site:
position = -124
score = 5.12365
sequence = CACCTATATATAGTAG

Gene: ETAE_0423: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
*
Proteus mirabilis HI4320

Site:
position = -143
score = 4.74013
sequence = TTACTATATATTGTGC

Site:
position = -111
score = 4.24012
sequence = ATACAACATATAGTAA

Gene: PMI3451: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
*
Photorhabdus luminescens subsp. laumondii TTO1

Site:
position = -119
score = 5.10558
sequence = TTACTATATATTGTGT

Site:
position = -88
score = 3.75302
sequence = AGACTATATATAGCAA

Gene: plu4499: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
nrdG
 
Escherichia coli str. K-12 substr. MG1655

Gene: b4237: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)
 
Salmonella typhimurium LT2

Gene: STM4451: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)
 
Citrobacter koseri ATCC BAA-895

Gene: CKO_03582: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)
 
Klebsiella pneumoniae subsp. pneumoniae MGH 78578

Gene: KPN_04645: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)
 
Enterobacter sp. 638

Gene: Ent638_0436: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)
 
Erwinia amylovora ATCC 49946

Gene: EAM_3060: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)
 
Yersinia pestis KIM

Gene: y0732: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)
 
Serratia proteamaculans 568

Gene: Spro_0524: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)
 
Erwinia carotovora subsp. atroseptica SCRI1043

Gene: ECA0374: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)
 
Edwardsiella tarda EIB202

Gene: ETAE_0422: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)
 
Proteus mirabilis HI4320

Gene: PMI3450: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)
 
Photorhabdus luminescens subsp. laumondii TTO1

Gene: plu4500: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)
Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)
 
CRON 3.
nrdH
*
Escherichia coli str. K-12 substr. MG1655

Site:
position = -120
score = 4.79546
sequence = TTGCTATATATTGTGT

Site:
position = -89
score = 5.4817
sequence = CAACTACATCTAGTAT

Gene: b2673: Glutaredoxin-like protein NrdH, required for reduction of Ribonucleotide reductase class Ib
*
Salmonella typhimurium LT2

Site:
position = -89
score = 5.4817
sequence = CAACTACATCTAGTAT

Site:
position = -121
score = 4.69084
sequence = TTCCCATATCTTGTAT

Gene: STM2805: Glutaredoxin-like protein NrdH, required for reduction of Ribonucleotide reductase class Ib
*
Citrobacter koseri ATCC BAA-895

Site:
position = -106
score = 4.59756
sequence = TTCCCATATCTTGTGT

Site:
position = -75
score = 5.34036
sequence = CATCTACATCTAGTAT

Gene: CKO_04022: Glutaredoxin-like protein NrdH, required for reduction of Ribonucleotide reductase class Ib
*
Klebsiella pneumoniae subsp. pneumoniae MGH 78578

Site:
position = -182
score = 4.55058
sequence = ACGCTATATATTGAGT

Site:
position = -151
score = 5.40437
sequence = TAACTACATCTAGTAT

Gene: KPN_03004: Glutaredoxin-like protein NrdH, required for reduction of Ribonucleotide reductase class Ib
*
Enterobacter sp. 638

Site:
position = -106
score = 4.59756
sequence = TTCCCATATCTTGTGT

Site:
position = -75
score = 5.4817
sequence = CAACTACATCTAGTAT

Gene: Ent638_3153: Glutaredoxin-like protein NrdH, required for reduction of Ribonucleotide reductase class Ib
*
Erwinia amylovora ATCC 49946

Site:
position = -121
score = 5.14089
sequence = ACGCTATATCTAGTAT

Site:
position = -89
score = 4.19528
sequence = ACGCTATATGGTGTGT

Gene: EAM_2594: Glutaredoxin-like protein NrdH, required for reduction of Ribonucleotide reductase class Ib
*
Yersinia pestis KIM

Site:
position = -171
score = 5.21963
sequence = TAACTACATGTAGTGT

Site:
position = -140
score = 5.29376
sequence = GCACTACATATAGTAT

Gene: y1225: Glutaredoxin-like protein NrdH, required for reduction of Ribonucleotide reductase class Ib
*
Serratia proteamaculans 568

Site:
position = -164
score = 4.35867
sequence = ACACCATATATAGCGT

Site:
position = -133
score = 5.38613
sequence = TATCTACATATAGTAT

Gene: Spro_3721: Glutaredoxin-like protein NrdH, required for reduction of Ribonucleotide reductase class Ib
*
Erwinia carotovora subsp. atroseptica SCRI1043

Site:
position = -162
score = 4.35326
sequence = ATCATATATCTTGTGT

Site:
position = -131
score = 5.26303
sequence = TATCTACATCTAGTAT

Gene: ECA3335: Glutaredoxin-like protein NrdH, required for reduction of Ribonucleotide reductase class Ib
 
Edwardsiella tarda EIB202
*
Proteus mirabilis HI4320

Site:
position = -107
score = 4.87578
sequence = ACACCATATCTAGTGT

Site:
position = -76
score = 5.59475
sequence = AACCTATATATAGTAT

Gene: PMI0416: Glutaredoxin-like protein NrdH, required for reduction of Ribonucleotide reductase class Ib
*
Photorhabdus luminescens subsp. laumondii TTO1

Site:
position = -133
score = 4.63344
sequence = ACACCATATATAGTGC

Site:
position = -102
score = 5.60388
sequence = TCACTACATATAGTAT

Gene: plu1287: Glutaredoxin-like protein NrdH, required for reduction of Ribonucleotide reductase class Ib
Glutaredoxin-like protein NrdH, required for reduction of Ribonucleotide reductase class Ib
nrdI
 
Escherichia coli str. K-12 substr. MG1655

Gene: b2674: Ribonucleotide reductase stimulatory protein NrdI
 
Salmonella typhimurium LT2

Gene: STM2806: Ribonucleotide reductase stimulatory protein NrdI
 
Citrobacter koseri ATCC BAA-895

Gene: CKO_04023: Ribonucleotide reductase stimulatory protein NrdI
 
Klebsiella pneumoniae subsp. pneumoniae MGH 78578

Gene: KPN_03005: Ribonucleotide reductase stimulatory protein NrdI
 
Enterobacter sp. 638

Gene: Ent638_3154: Ribonucleotide reductase stimulatory protein NrdI
 
Erwinia amylovora ATCC 49946

Gene: EAM_2595: Ribonucleotide reductase stimulatory protein NrdI
 
Yersinia pestis KIM
 
Serratia proteamaculans 568

Gene: Spro_3722: Ribonucleotide reductase stimulatory protein NrdI
 
Erwinia carotovora subsp. atroseptica SCRI1043

Gene: ECA3336: Ribonucleotide reductase stimulatory protein NrdI
 
Edwardsiella tarda EIB202
 
Proteus mirabilis HI4320

Gene: PMI0415: Ribonucleotide reductase stimulatory protein NrdI
 
Photorhabdus luminescens subsp. laumondii TTO1

Gene: plu1286: Ribonucleotide reductase stimulatory protein NrdI
Ribonucleotide reductase stimulatory protein NrdI
nrdE
 
Escherichia coli str. K-12 substr. MG1655

Gene: b2675: Ribonucleotide reductase of class Ib (aerobic), alpha subunit (EC 1.17.4.1)
 
Salmonella typhimurium LT2

Gene: STM2807: Ribonucleotide reductase of class Ib (aerobic), alpha subunit (EC 1.17.4.1)
 
Citrobacter koseri ATCC BAA-895

Gene: CKO_04024: Ribonucleotide reductase of class Ib (aerobic), alpha subunit (EC 1.17.4.1)
 
Klebsiella pneumoniae subsp. pneumoniae MGH 78578

Gene: KPN_03006: Ribonucleotide reductase of class Ib (aerobic), alpha subunit (EC 1.17.4.1)
 
Enterobacter sp. 638

Gene: Ent638_3155: Ribonucleotide reductase of class Ib (aerobic), alpha subunit (EC 1.17.4.1)
 
Erwinia amylovora ATCC 49946

Gene: EAM_2596: Ribonucleotide reductase of class Ib (aerobic), alpha subunit (EC 1.17.4.1)
 
Yersinia pestis KIM

Gene: y1223: Ribonucleotide reductase of class Ib (aerobic), alpha subunit (EC 1.17.4.1)
 
Serratia proteamaculans 568

Gene: Spro_3723: Ribonucleotide reductase of class Ib (aerobic), alpha subunit (EC 1.17.4.1)
 
Erwinia carotovora subsp. atroseptica SCRI1043

Gene: ECA3337: Ribonucleotide reductase of class Ib (aerobic), alpha subunit (EC 1.17.4.1)
 
Edwardsiella tarda EIB202
 
Proteus mirabilis HI4320

Gene: PMI0414: Ribonucleotide reductase of class Ib (aerobic), alpha subunit (EC 1.17.4.1)
 
Photorhabdus luminescens subsp. laumondii TTO1

Gene: plu1285: Ribonucleotide reductase of class Ib (aerobic), alpha subunit (EC 1.17.4.1)
Ribonucleotide reductase of class Ib (aerobic), alpha subunit (EC 1.17.4.1)
nrdF
 
Escherichia coli str. K-12 substr. MG1655

Gene: b2676: Ribonucleotide reductase of class Ib (aerobic), beta subunit (EC 1.17.4.1)
 
Salmonella typhimurium LT2

Gene: STM2808: Ribonucleotide reductase of class Ib (aerobic), beta subunit (EC 1.17.4.1)
 
Citrobacter koseri ATCC BAA-895

Gene: CKO_04025: Ribonucleotide reductase of class Ib (aerobic), beta subunit (EC 1.17.4.1)
 
Klebsiella pneumoniae subsp. pneumoniae MGH 78578

Gene: KPN_03007: Ribonucleotide reductase of class Ib (aerobic), beta subunit (EC 1.17.4.1)
 
Enterobacter sp. 638

Gene: Ent638_3156: Ribonucleotide reductase of class Ib (aerobic), beta subunit (EC 1.17.4.1)
 
Erwinia amylovora ATCC 49946

Gene: EAM_2597: Ribonucleotide reductase of class Ib (aerobic), beta subunit (EC 1.17.4.1)
 
Yersinia pestis KIM

Gene: y1222: Ribonucleotide reductase of class Ib (aerobic), beta subunit (EC 1.17.4.1)
 
Serratia proteamaculans 568

Gene: Spro_3724: Ribonucleotide reductase of class Ib (aerobic), beta subunit (EC 1.17.4.1)
 
Erwinia carotovora subsp. atroseptica SCRI1043

Gene: ECA3338: Ribonucleotide reductase of class Ib (aerobic), beta subunit (EC 1.17.4.1)
 
Edwardsiella tarda EIB202
 
Proteus mirabilis HI4320

Gene: PMI0413: Ribonucleotide reductase of class Ib (aerobic), beta subunit (EC 1.17.4.1)
 
Photorhabdus luminescens subsp. laumondii TTO1

Gene: plu1284: Ribonucleotide reductase of class Ib (aerobic), beta subunit (EC 1.17.4.1)
Ribonucleotide reductase of class Ib (aerobic), beta subunit (EC 1.17.4.1)
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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