Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog MurR - Bacillales

Properties
Regulator type: Transcription factor
Regulator family: RpiR
Regulation mode: repressor
Biological process: N-acetylmuramate utilization
Effector: N-acetylmuramate-6-phosphate
Phylum: Firmicutes
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 3 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Bacillus subtilis subsp. subtilis str. 168 6 1
Bacillus amyloliquefaciens FZB42
Bacillus pumilus SAFR-032 6 1
Bacillus licheniformis DSM 13 6 1
Anoxybacillus flavithermus WK1
Geobacillus kaustophilus HTA426
Bacillus cereus ATCC 14579
Bacillus halodurans C-125
Bacillus clausii KSM-K16
Oceanobacillus iheyensis HTE831
Paenibacillus sp. JDR-2
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
murQ
*
Bacillus subtilis subsp. subtilis str. 168

Site:
position = -103
score = 6.03376
sequence = GTGAAATAAAATTTCAA

Gene: BSU01700: N-acetylmuramic acid 6-phosphate etherase (EC 4.2.-.-)
 
Bacillus amyloliquefaciens FZB42

Gene: RBAM_002180: N-acetylmuramic acid 6-phosphate etherase (EC 4.2.-.-)
*
Bacillus pumilus SAFR-032

Site:
position = -90
score = 6.15721
sequence = CTGAAATATAATTTCAG

Gene: BPUM_0158: N-acetylmuramic acid 6-phosphate etherase (EC 4.2.-.-)
*
Bacillus licheniformis DSM 13

Site:
position = -74
score = 6.20815
sequence = TTGAAATTATATTTCAG

Gene: BLi00191: N-acetylmuramic acid 6-phosphate etherase (EC 4.2.-.-)
 
Anoxybacillus flavithermus WK1
 
Geobacillus kaustophilus HTA426
 
Bacillus cereus ATCC 14579

Gene: BC0841: N-acetylmuramic acid 6-phosphate etherase (EC 4.2.-.-)
 
Bacillus halodurans C-125

Gene: BH3575: N-acetylmuramic acid 6-phosphate etherase (EC 4.2.-.-)
 
Bacillus clausii KSM-K16

Gene: ABC0311: N-acetylmuramic acid 6-phosphate etherase (EC 4.2.-.-)
 
Oceanobacillus iheyensis HTE831

Gene: OB0614: N-acetylmuramic acid 6-phosphate etherase (EC 4.2.-.-)
 
Paenibacillus sp. JDR-2
N-acetylmuramic acid 6-phosphate etherase (EC 4.2.-.-)
murR
 
Bacillus subtilis subsp. subtilis str. 168

Gene: BSU01690: Transcriptional regulator of muropeptide rescue pathway operon, RpiR family
 
Bacillus amyloliquefaciens FZB42
 
Bacillus pumilus SAFR-032

Gene: BPUM_0157: Transcriptional regulator of muropeptide rescue pathway operon, RpiR family
 
Bacillus licheniformis DSM 13

Gene: BLi00190: Transcriptional regulator of muropeptide rescue pathway operon, RpiR family
 
Anoxybacillus flavithermus WK1
 
Geobacillus kaustophilus HTA426
 
Bacillus cereus ATCC 14579
 
Bacillus halodurans C-125
 
Bacillus clausii KSM-K16
 
Oceanobacillus iheyensis HTE831
 
Paenibacillus sp. JDR-2
Transcriptional regulator of muropeptide rescue pathway operon, RpiR family
ybbF
 
Bacillus subtilis subsp. subtilis str. 168

Gene: BSU01680: PTS system, MurNAc-specific IIBC component (EC 2.7.1.69)
 
Bacillus amyloliquefaciens FZB42

Gene: RBAM_002170: PTS system, MurNAc-specific IIBC component (EC 2.7.1.69)
 
Bacillus pumilus SAFR-032

Gene: BPUM_0156: PTS system, MurNAc-specific IIBC component (EC 2.7.1.69)
 
Bacillus licheniformis DSM 13

Gene: BLi00189: PTS system, MurNAc-specific IIBC component (EC 2.7.1.69)
 
Anoxybacillus flavithermus WK1
 
Geobacillus kaustophilus HTA426
 
Bacillus cereus ATCC 14579

Gene: BC0842: PTS system, MurNAc-specific IIBC component (EC 2.7.1.69)
 
Bacillus halodurans C-125

Gene: BH3574: PTS system, MurNAc-specific IIBC component (EC 2.7.1.69)
 
Bacillus clausii KSM-K16

Gene: ABC0312: PTS system, MurNAc-specific IIBC component (EC 2.7.1.69)
 
Oceanobacillus iheyensis HTE831

Gene: OB0615: PTS system, MurNAc-specific IIBC component (EC 2.7.1.69)
 
Paenibacillus sp. JDR-2
PTS system, MurNAc-specific IIBC component (EC 2.7.1.69)
amiE
 
Bacillus subtilis subsp. subtilis str. 168

Gene: BSU01670: Amidase of hydrolyzes the N-acetylmuramyl- L-Ala bond of MurNAc peptides
 
Bacillus amyloliquefaciens FZB42

Gene: RBAM_002160: Amidase of hydrolyzes the N-acetylmuramyl- L-Ala bond of MurNAc peptides
 
Bacillus pumilus SAFR-032

Gene: BPUM_0155: Amidase of hydrolyzes the N-acetylmuramyl- L-Ala bond of MurNAc peptides
 
Bacillus licheniformis DSM 13

Gene: BLi00188: Amidase of hydrolyzes the N-acetylmuramyl- L-Ala bond of MurNAc peptides
 
Anoxybacillus flavithermus WK1
 
Geobacillus kaustophilus HTA426
 
Bacillus cereus ATCC 14579
 
Bacillus halodurans C-125
 
Bacillus clausii KSM-K16
 
Oceanobacillus iheyensis HTE831
 
Paenibacillus sp. JDR-2
Amidase of hydrolyzes the N-acetylmuramyl- L-Ala bond of MurNAc peptides
nagZ
 
Bacillus subtilis subsp. subtilis str. 168

Gene: BSU01660: Beta--N-acetylglucosaminidase
 
Bacillus amyloliquefaciens FZB42

Gene: RBAM_002150: Beta--N-acetylglucosaminidase
 
Bacillus pumilus SAFR-032

Gene: BPUM_0154: Beta--N-acetylglucosaminidase
 
Bacillus licheniformis DSM 13

Gene: BLi00187: Beta--N-acetylglucosaminidase
 
Anoxybacillus flavithermus WK1
 
Geobacillus kaustophilus HTA426
 
Bacillus cereus ATCC 14579
 
Bacillus halodurans C-125

Gene: BH0675: Beta--N-acetylglucosaminidase
 
Bacillus clausii KSM-K16
 
Oceanobacillus iheyensis HTE831
 
Paenibacillus sp. JDR-2
Beta--N-acetylglucosaminidase
ybbC
 
Bacillus subtilis subsp. subtilis str. 168

Gene: BSU01650: Hypothetical protein
 
Bacillus amyloliquefaciens FZB42

Gene: RBAM_002140: Hypothetical protein
 
Bacillus pumilus SAFR-032

Gene: BPUM_0153: Hypothetical protein
 
Bacillus licheniformis DSM 13

Gene: BLi00186: Hypothetical protein
 
Anoxybacillus flavithermus WK1
 
Geobacillus kaustophilus HTA426
 
Bacillus cereus ATCC 14579
 
Bacillus halodurans C-125

Gene: BH0674: Hypothetical protein
 
Bacillus clausii KSM-K16
 
Oceanobacillus iheyensis HTE831

Gene: OB1304: Hypothetical protein
 
Paenibacillus sp. JDR-2
Hypothetical protein
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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