Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog LiuR - Ralstonia

Properties
Regulator type: Transcription factor
Regulator family: MerR
Regulation mode:
Biological process: Branched-chain amino acid degradation
Effector:
Phylum: Proteobacteria/beta
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 57 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Ralstonia solanacearum GMI1000 12 6
Ralstonia pickettii 12J 12 6
Ralstonia metallidurans CH34 17 5
Ralstonia eutropha JMP134 16 4
Ralstonia eutropha H16 20 5
Cupriavidus taiwanensis 20 5
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
serA
*
Ralstonia solanacearum GMI1000

Site:
position = -34
score = 6.04197
sequence = CTTGACGTATACGTCAAC

Gene: RS00697: D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)
*
Ralstonia pickettii 12J

Site:
position = -41
score = 5.66568
sequence = CTTGACGTATACGTCAAT

Gene: Rpic_0115: D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)
 
Ralstonia metallidurans CH34

Gene: Rmet_0118: D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)
 
Ralstonia eutropha JMP134

Gene: Reut_A0152: D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)
 
Ralstonia eutropha H16

Gene: H16_A0185: D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)
 
Cupriavidus taiwanensis

Gene: RALTA_A0128: D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)
D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)
liuE
 
Ralstonia solanacearum GMI1000

Gene: RS00696: Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4)
 
Ralstonia pickettii 12J

Gene: Rpic_0114: Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4)
 
Ralstonia metallidurans CH34

Gene: Rmet_0607: Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4)
 
Ralstonia eutropha JMP134

Gene: Reut_A0153: Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4)
 
Ralstonia eutropha H16

Gene: H16_A0186: Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4)
 
Cupriavidus taiwanensis

Gene: RALTA_A0129: Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4)
Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4)
dcp
 
Ralstonia solanacearum GMI1000

Gene: RS00695: Peptidyl-dipeptidase dcp (EC 3.4.15.5)
 
Ralstonia pickettii 12J

Gene: Rpic_0113: Peptidyl-dipeptidase dcp (EC 3.4.15.5)
 
Ralstonia metallidurans CH34

Gene: Rmet_0119: Peptidyl-dipeptidase dcp (EC 3.4.15.5)
 
Ralstonia eutropha JMP134

Gene: Reut_A0154: Peptidyl-dipeptidase dcp (EC 3.4.15.5)
 
Ralstonia eutropha H16

Gene: H16_A0187: Peptidyl-dipeptidase dcp (EC 3.4.15.5)
 
Cupriavidus taiwanensis

Gene: RALTA_A0130: Peptidyl-dipeptidase dcp (EC 3.4.15.5)
Peptidyl-dipeptidase dcp (EC 3.4.15.5)
RSc0259
 
Ralstonia solanacearum GMI1000

Gene: RS00694: Protein of unknown function DUF1289
 
Ralstonia pickettii 12J

Gene: Rpic_0112: Protein of unknown function DUF1289
 
Ralstonia metallidurans CH34

Gene: Rmet_0120: Protein of unknown function DUF1289
 
Ralstonia eutropha JMP134

Gene: Reut_A0156: Protein of unknown function DUF1289
 
Ralstonia eutropha H16

Gene: H16_A0189: Protein of unknown function DUF1289
 
Cupriavidus taiwanensis

Gene: RALTA_A0132: Protein of unknown function DUF1289
Protein of unknown function DUF1289
RSc0258
 
Ralstonia solanacearum GMI1000

Gene: RS00693: Beta-lactamase domain protein
 
Ralstonia pickettii 12J

Gene: Rpic_0111: Beta-lactamase domain protein
 
Ralstonia metallidurans CH34

Gene: Rmet_0121: Beta-lactamase domain protein
 
Ralstonia eutropha JMP134

Gene: Reut_A0157: Beta-lactamase domain protein
 
Ralstonia eutropha H16

Gene: H16_A0190: Beta-lactamase domain protein
 
Cupriavidus taiwanensis

Gene: RALTA_A0133: Beta-lactamase domain protein
Beta-lactamase domain protein
 
CRON 2.
mcm
*
Ralstonia solanacearum GMI1000

Site:
position = -113
score = 6.58437
sequence = GTTGACGTTTACGTAAAC

Gene: RS00669: Methylmalonyl-CoA mutase (EC 5.4.99.2)
*
Ralstonia pickettii 12J

Site:
position = -118
score = 4.8267
sequence = GTTGACGAGTGCGTCAAC

Gene: Rpic_0089: Methylmalonyl-CoA mutase (EC 5.4.99.2)
*
Ralstonia metallidurans CH34

Site:
position = -98
score = 4.47423
sequence = GTTAACGTAAACGTCATA

Site:
position = -104
score = 5.73815
sequence = CCTTACGTTAACGTAAAC

Gene: Rmet_0210: Methylmalonyl-CoA mutase (EC 5.4.99.2)
 
Ralstonia eutropha JMP134

Gene: Reut_A0253: Methylmalonyl-CoA mutase (EC 5.4.99.2)
*
Ralstonia eutropha H16

Site:
position = -133
score = 4.22532
sequence = GTTAACGTCAACGTCATA

Site:
position = -139
score = 6.00081
sequence = CTTTACGTTAACGTCAAC

Gene: H16_A0280: Methylmalonyl-CoA mutase (EC 5.4.99.2)
*
Cupriavidus taiwanensis

Site:
position = -136
score = 6.093
sequence = ATTTACGTTAACGTCAAC

Site:
position = -130
score = 4.22532
sequence = GTTAACGTCAACGTCATA

Gene: RALTA_A0218: Methylmalonyl-CoA mutase (EC 5.4.99.2)
Methylmalonyl-CoA mutase (EC 5.4.99.2)
hit
 
Ralstonia solanacearum GMI1000

Gene: RSp0494: Bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) (EC 3.6.1.17)
 
Ralstonia pickettii 12J

Gene: Rpic_4702: Bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) (EC 3.6.1.17)
 
Ralstonia metallidurans CH34

Gene: Rmet_0211: Bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) (EC 3.6.1.17)
 
Ralstonia eutropha JMP134

Gene: Reut_A0254: Bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) (EC 3.6.1.17)
 
Ralstonia eutropha H16

Gene: H16_A0281: Bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) (EC 3.6.1.17)
 
Cupriavidus taiwanensis

Gene: RALTA_A0219: Bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) (EC 3.6.1.17)
Bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) (EC 3.6.1.17)
paaH1
 
Ralstonia solanacearum GMI1000

Gene: RSc0244: 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)
 
Ralstonia pickettii 12J

Gene: Rpic_0090: 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)
 
Ralstonia metallidurans CH34

Gene: Rmet_0212: 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)
 
Ralstonia eutropha JMP134

Gene: Reut_A0255: 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)
 
Ralstonia eutropha H16

Gene: H16_A0282: 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)
 
Cupriavidus taiwanensis

Gene: RALTA_A0220: 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)
3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)
 
CRON 3.
RSc0281
*
Ralstonia solanacearum GMI1000

Site:
position = -77
score = 6.28835
sequence = ATTGACGTTTACGTTAGC

Site:
position = -71
score = 4.87467
sequence = GTTTACGTTAGCGTCAAA

Gene: RS03248: Metallo-beta-lactamase family protein
*
Ralstonia pickettii 12J

Site:
position = -85
score = 5.07446
sequence = GTTTACGTTAGCGTCAAT

Site:
position = -91
score = 6.28835
sequence = ATTGACGTTTACGTTAGC

Gene: Rpic_0131: Metallo-beta-lactamase family protein
*
Ralstonia metallidurans CH34

Site:
position = -50
score = 4.75469
sequence = GTTAACGTTAGCGTCAAG

Site:
position = -56
score = 6.24719
sequence = ATTGACGTTAACGTTAGC

Gene: Rmet_0101: Metallo-beta-lactamase family protein
*
Ralstonia eutropha JMP134

Site:
position = -149
score = 5.45074
sequence = GTTTACGTTAGCGTCAAC

Site:
position = -155
score = 6.23303
sequence = GTTGACGTTTACGTTAGC

Gene: Reut_A0132: Metallo-beta-lactamase family protein
*
Ralstonia eutropha H16

Site:
position = -130
score = 6.28835
sequence = ATTGACGTTTACGTTAGC

Site:
position = -124
score = 5.45074
sequence = GTTTACGTTAGCGTCAAC

Gene: H16_A0164: Metallo-beta-lactamase family protein
*
Cupriavidus taiwanensis

Site:
position = -132
score = 6.23303
sequence = GTTGACGTTTACGTTAGC

Site:
position = -126
score = 5.45074
sequence = GTTTACGTTAGCGTCAAC

Gene: RALTA_A0107: Metallo-beta-lactamase family protein
Metallo-beta-lactamase family protein
 
CRON 4.
liuR
*
Ralstonia solanacearum GMI1000

Site:
position = -101
score = 4.77323
sequence = GCTAACGTAAACGTCAAT

Site:
position = -107
score = 6.09005
sequence = TTTGACGCTAACGTAAAC

Gene: RS03247: Transcriptional regulator, MerR family
*
Ralstonia pickettii 12J

Site:
position = -111
score = 4.77323
sequence = GCTAACGTAAACGTCAAT

Site:
position = -117
score = 6.41819
sequence = ATTGACGCTAACGTAAAC

Gene: Rpic_0130: Transcriptional regulator, MerR family
*
Ralstonia metallidurans CH34

Site:
position = -100
score = 6.18381
sequence = CTTGACGCTAACGTTAAC

Site:
position = -94
score = 5.08875
sequence = GCTAACGTTAACGTCAAT

Gene: Rmet_0102: Transcriptional regulator, MerR family
*
Ralstonia eutropha JMP134

Site:
position = -99
score = 6.36287
sequence = GTTGACGCTAACGTAAAC

Site:
position = -93
score = 5.14952
sequence = GCTAACGTAAACGTCAAC

Gene: Reut_A0133: Transcriptional regulator, MerR family
*
Ralstonia eutropha H16

Site:
position = -93
score = 4.77323
sequence = GCTAACGTAAACGTCAAT

Site:
position = -99
score = 6.36287
sequence = GTTGACGCTAACGTAAAC

Gene: H16_A0165: Transcriptional regulator, MerR family
*
Cupriavidus taiwanensis

Site:
position = -92
score = 5.14952
sequence = GCTAACGTAAACGTCAAC

Site:
position = -98
score = 6.36287
sequence = GTTGACGCTAACGTAAAC

Gene: RALTA_A0108: Transcriptional regulator, MerR family
Transcriptional regulator, MerR family
 
CRON 5.
paaI
 
Ralstonia solanacearum GMI1000
 
Ralstonia pickettii 12J
 
Ralstonia metallidurans CH34
*
Ralstonia eutropha JMP134

Site:
position = -52
score = 5.34588
sequence = GTTTACGTAAACGTCAAT

Site:
position = -58
score = 6.63969
sequence = ATTGACGTTTACGTAAAC

Gene: Reut_A0134: Phenylacetic acid degradation-related protein
*
Ralstonia eutropha H16

Site:
position = -87
score = 5.34588
sequence = GTTTACGTAAACGTCAAT

Site:
position = -93
score = 6.63969
sequence = ATTGACGTTTACGTAAAC

Gene: H16_A0166: Phenylacetic acid degradation-related protein
*
Cupriavidus taiwanensis

Site:
position = -84
score = 5.53588
sequence = GTTTACGTAAACGTAAAT

Site:
position = -90
score = 6.63969
sequence = ATTGACGTTTACGTAAAC

Gene: RALTA_A0109: Phenylacetic acid degradation-related protein
Phenylacetic acid degradation-related protein
liuA
*
Ralstonia solanacearum GMI1000

Site:
position = -131
score = 5.34588
sequence = GTTTACGTAAACGTCAAT

Site:
position = -137
score = 6.58437
sequence = GTTGACGTTTACGTAAAC

Gene: RS03246: Isovaleryl-CoA dehydrogenase (EC 1.3.99.10); Butyryl-CoA dehydrogenase (EC 1.3.99.2)
*
Ralstonia pickettii 12J

Site:
position = -144
score = 5.34588
sequence = GTTTACGTAAACGTCAAT

Site:
position = -150
score = 6.63969
sequence = ATTGACGTTTACGTAAAC

Gene: Rpic_0129: Isovaleryl-CoA dehydrogenase (EC 1.3.99.10); Butyryl-CoA dehydrogenase (EC 1.3.99.2)
*
Ralstonia metallidurans CH34

Site:
position = -81
score = 5.34588
sequence = GTTTACGTAAACGTCAAT

Site:
position = -87
score = 6.63969
sequence = ATTGACGTTTACGTAAAC

Gene: Rmet_0103: Isovaleryl-CoA dehydrogenase (EC 1.3.99.10); Butyryl-CoA dehydrogenase (EC 1.3.99.2)
 
Ralstonia eutropha JMP134

Gene: Reut_A0135: Isovaleryl-CoA dehydrogenase (EC 1.3.99.10); Butyryl-CoA dehydrogenase (EC 1.3.99.2)
 
Ralstonia eutropha H16

Gene: H16_A0167: Isovaleryl-CoA dehydrogenase (EC 1.3.99.10); Butyryl-CoA dehydrogenase (EC 1.3.99.2)
 
Cupriavidus taiwanensis

Gene: RALTA_A0110: Isovaleryl-CoA dehydrogenase (EC 1.3.99.10); Butyryl-CoA dehydrogenase (EC 1.3.99.2)
Isovaleryl-CoA dehydrogenase (EC 1.3.99.10); Butyryl-CoA dehydrogenase (EC 1.3.99.2)
aceK
 
Ralstonia solanacearum GMI1000

Gene: RSc0278: Isocitrate dehydrogenase phosphatase (EC 2.7.11.5)/kinase (EC 3.1.3.-)
 
Ralstonia pickettii 12J

Gene: Rpic_0128: Isocitrate dehydrogenase phosphatase (EC 2.7.11.5)/kinase (EC 3.1.3.-)
 
Ralstonia metallidurans CH34

Gene: Rmet_0104: Isocitrate dehydrogenase phosphatase (EC 2.7.11.5)/kinase (EC 3.1.3.-)
 
Ralstonia eutropha JMP134

Gene: Reut_A0136: Isocitrate dehydrogenase phosphatase (EC 2.7.11.5)/kinase (EC 3.1.3.-)
 
Ralstonia eutropha H16

Gene: H16_A0168: Isocitrate dehydrogenase phosphatase (EC 2.7.11.5)/kinase (EC 3.1.3.-)
 
Cupriavidus taiwanensis

Gene: RALTA_A0111: Isocitrate dehydrogenase phosphatase (EC 2.7.11.5)/kinase (EC 3.1.3.-)
Isocitrate dehydrogenase phosphatase (EC 2.7.11.5)/kinase (EC 3.1.3.-)
cah
 
Ralstonia solanacearum GMI1000

Gene: RS03244: Carbonic anhydrase (EC 4.2.1.1)
 
Ralstonia pickettii 12J

Gene: Rpic_0127: Carbonic anhydrase (EC 4.2.1.1)
 
Ralstonia metallidurans CH34

Gene: Rmet_0105: Carbonic anhydrase (EC 4.2.1.1)
 
Ralstonia eutropha JMP134

Gene: Reut_A0137: Carbonic anhydrase (EC 4.2.1.1)
 
Ralstonia eutropha H16

Gene: H16_A0169: Carbonic anhydrase (EC 4.2.1.1)
 
Cupriavidus taiwanensis

Gene: RALTA_A0112: Carbonic anhydrase (EC 4.2.1.1)
Carbonic anhydrase (EC 4.2.1.1)
ivdA
 
Ralstonia solanacearum GMI1000

Gene: RSc0276: Acetyl-CoA C-acyltransferase (EC 2.3.1.16)
 
Ralstonia pickettii 12J

Gene: Rpic_0126: Acetyl-CoA C-acyltransferase (EC 2.3.1.16)
 
Ralstonia metallidurans CH34

Gene: Rmet_0106: Acetyl-CoA C-acyltransferase (EC 2.3.1.16)
 
Ralstonia eutropha JMP134

Gene: Reut_A0138: Acetyl-CoA C-acyltransferase (EC 2.3.1.16)
 
Ralstonia eutropha H16

Gene: H16_A0170: Acetyl-CoA C-acyltransferase (EC 2.3.1.16)
 
Cupriavidus taiwanensis

Gene: RALTA_A0113: Acetyl-CoA C-acyltransferase (EC 2.3.1.16)
Acetyl-CoA C-acyltransferase (EC 2.3.1.16)
Rmet_0107
 
Ralstonia solanacearum GMI1000

Gene: RS03242: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
 
Ralstonia pickettii 12J

Gene: Rpic_0125: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
 
Ralstonia metallidurans CH34

Gene: Rmet_0107: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
 
Ralstonia eutropha JMP134

Gene: Reut_A0139: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
 
Ralstonia eutropha H16

Gene: H16_A0171: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
 
Cupriavidus taiwanensis

Gene: RALTA_A0114: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
ivdC
 
Ralstonia solanacearum GMI1000

Gene: RS03241: Isovaleryl-CoA dehydrogenase (EC 1.3.99.10); Butyryl-CoA dehydrogenase (EC 1.3.99.2)
 
Ralstonia pickettii 12J

Gene: Rpic_0124: Isovaleryl-CoA dehydrogenase (EC 1.3.99.10); Butyryl-CoA dehydrogenase (EC 1.3.99.2)
 
Ralstonia metallidurans CH34

Gene: Rmet_0108: Isovaleryl-CoA dehydrogenase (EC 1.3.99.10); Butyryl-CoA dehydrogenase (EC 1.3.99.2)
 
Ralstonia eutropha JMP134

Gene: Reut_A0140: Isovaleryl-CoA dehydrogenase (EC 1.3.99.10); Butyryl-CoA dehydrogenase (EC 1.3.99.2)
 
Ralstonia eutropha H16

Gene: H16_A0172: Isovaleryl-CoA dehydrogenase (EC 1.3.99.10); Butyryl-CoA dehydrogenase (EC 1.3.99.2)
 
Cupriavidus taiwanensis

Gene: RALTA_A0115: Isovaleryl-CoA dehydrogenase (EC 1.3.99.10); Butyryl-CoA dehydrogenase (EC 1.3.99.2)
Isovaleryl-CoA dehydrogenase (EC 1.3.99.10); Butyryl-CoA dehydrogenase (EC 1.3.99.2)
Rmet_0109
 
Ralstonia solanacearum GMI1000

Gene: RS03240: 2-Hydroxychromene-2-carboxylate isomerase
 
Ralstonia pickettii 12J

Gene: Rpic_0123: 2-Hydroxychromene-2-carboxylate isomerase
 
Ralstonia metallidurans CH34

Gene: Rmet_0109: 2-Hydroxychromene-2-carboxylate isomerase
 
Ralstonia eutropha JMP134

Gene: Reut_A0141: 2-Hydroxychromene-2-carboxylate isomerase
 
Ralstonia eutropha H16

Gene: H16_A0173: 2-Hydroxychromene-2-carboxylate isomerase
 
Cupriavidus taiwanensis

Gene: RALTA_A0116: 2-Hydroxychromene-2-carboxylate isomerase
2-Hydroxychromene-2-carboxylate isomerase
Rmet_0110
 
Ralstonia solanacearum GMI1000

Gene: RS03238: Putative phosphatase YieH
 
Ralstonia pickettii 12J

Gene: Rpic_0122: Putative phosphatase YieH
 
Ralstonia metallidurans CH34

Gene: Rmet_0110: Putative phosphatase YieH
 
Ralstonia eutropha JMP134

Gene: Reut_A0142: Putative phosphatase YieH
 
Ralstonia eutropha H16

Gene: H16_A0174: Putative phosphatase YieH
 
Cupriavidus taiwanensis

Gene: RALTA_A0117: Putative phosphatase YieH
Putative phosphatase YieH
Rmet_0111
 
Ralstonia solanacearum GMI1000

Gene: RS03237: hypothetical protein
 
Ralstonia pickettii 12J

Gene: Rpic_0121: hypothetical protein
 
Ralstonia metallidurans CH34

Gene: Rmet_0111: hypothetical protein
 
Ralstonia eutropha JMP134

Gene: Reut_A0143: hypothetical protein
 
Ralstonia eutropha H16

Gene: H16_A0175: hypothetical protein
 
Cupriavidus taiwanensis

Gene: RALTA_A0118: hypothetical protein
hypothetical protein
h16_A0176
 
Ralstonia solanacearum GMI1000
 
Ralstonia pickettii 12J
 
Ralstonia metallidurans CH34
 
Ralstonia eutropha JMP134

Gene: Reut_A0144: Maleylacetoacetate isomerase (EC 5.2.1.2) / Glutathione S-transferase
 
Ralstonia eutropha H16

Gene: H16_A0176: Maleylacetoacetate isomerase (EC 5.2.1.2) / Glutathione S-transferase
 
Cupriavidus taiwanensis

Gene: RALTA_A0119: Maleylacetoacetate isomerase (EC 5.2.1.2) / Glutathione S-transferase
Maleylacetoacetate isomerase (EC 5.2.1.2) / Glutathione S-transferase
liuB
 
Ralstonia solanacearum GMI1000

Gene: RS03236: Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.4)
 
Ralstonia pickettii 12J

Gene: Rpic_0120: Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.4)
 
Ralstonia metallidurans CH34
 
Ralstonia eutropha JMP134

Gene: Reut_A0145: Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.4)
 
Ralstonia eutropha H16

Gene: H16_A0177: Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.4)
 
Cupriavidus taiwanensis

Gene: RALTA_A0120: Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.4)
Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.4)
Rmet_0112
 
Ralstonia solanacearum GMI1000

Gene: RS03235: Dienelactone hydrolase or related enzyme
 
Ralstonia pickettii 12J

Gene: Rpic_0119: Dienelactone hydrolase or related enzyme
 
Ralstonia metallidurans CH34

Gene: Rmet_0112: Dienelactone hydrolase or related enzyme
 
Ralstonia eutropha JMP134

Gene: Reut_A0146: Dienelactone hydrolase or related enzyme
 
Ralstonia eutropha H16

Gene: H16_A0178: Dienelactone hydrolase or related enzyme
 
Cupriavidus taiwanensis

Gene: RALTA_A0121: Dienelactone hydrolase or related enzyme
Dienelactone hydrolase or related enzyme
liuC
 
Ralstonia solanacearum GMI1000

Gene: RS03234: Methylglutaconyl-CoA hydratase (EC 4.2.1.18)
 
Ralstonia pickettii 12J

Gene: Rpic_0118: Methylglutaconyl-CoA hydratase (EC 4.2.1.18)
 
Ralstonia metallidurans CH34

Gene: Rmet_0113: Methylglutaconyl-CoA hydratase (EC 4.2.1.18)
 
Ralstonia eutropha JMP134
 
Ralstonia eutropha H16

Gene: H16_A0179: Methylglutaconyl-CoA hydratase (EC 4.2.1.18)
 
Cupriavidus taiwanensis

Gene: RALTA_A0122: Methylglutaconyl-CoA hydratase (EC 4.2.1.18)
Methylglutaconyl-CoA hydratase (EC 4.2.1.18)
 
CRON 6.
paaH
*
Ralstonia solanacearum GMI1000

Site:
position = -53
score = 5.23171
sequence = TATGACGTTGACGTAAAC

Site:
position = -47
score = 5.66139
sequence = GTTGACGTAAACGTCAAT

Gene: RS05766: 3-hydroxyacyl-CoA dehydrogenase
*
Ralstonia pickettii 12J

Site:
position = -50
score = 3.9865
sequence = GCGAACGTAAACGTCAAG

Site:
position = -56
score = 5.8905
sequence = CTTGACGCGAACGTAAAC

Gene: Rpic_2811: 3-hydroxyacyl-CoA dehydrogenase
*
Ralstonia metallidurans CH34

Site:
position = -44
score = 6.59853
sequence = ATTGACGTTAACGTAAAC

Gene: Rmet_0531: 3-hydroxyacyl-CoA dehydrogenase
*
Ralstonia eutropha JMP134

Site:
position = -56
score = 6.58437
sequence = GTTGACGTTTACGTAAAC

Site:
position = -50
score = 4.54979
sequence = GTTTACGTAAACGGCAGT

Gene: Reut_A0589: 3-hydroxyacyl-CoA dehydrogenase
*
Ralstonia eutropha H16

Site:
position = -47
score = 5.13522
sequence = GTTTACGTAAACGGCAAC

Site:
position = -53
score = 6.63969
sequence = ATTGACGTTTACGTAAAC

Gene: H16_A0602: 3-hydroxyacyl-CoA dehydrogenase
*
Cupriavidus taiwanensis

Site:
position = -44
score = 6.112
sequence = CTTAACGTTTACGTAAAC

Site:
position = -38
score = 5.32523
sequence = GTTTACGTAAACGGAAAC

Gene: RALTA_A0558: 3-hydroxyacyl-CoA dehydrogenase
3-hydroxyacyl-CoA dehydrogenase
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD