Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog HexR - Ralstonia

Properties
Regulator type: Transcription factor
Regulator family: RpiR
Regulation mode: repressor (activator)
Biological process: Central carbohydrate metabolism
Effector: 2-keto-3-deoxy-6-phosphogluconate
Phylum: Proteobacteria/beta
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 24 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Ralstonia solanacearum GMI1000 4 2
Ralstonia pickettii 12J 4 2
Ralstonia metallidurans CH34 2 2
Ralstonia eutropha JMP134 2 2
Ralstonia eutropha H16 2 2
Cupriavidus taiwanensis 2 2
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
edd
*
Ralstonia solanacearum GMI1000

Site:
position = -220
score = 5.54907
sequence = TTGTAGTATTACTACAT

Site:
position = -42
score = 4.57763
sequence = TTGTAGGAAAATTACAT

Gene: RSp1560: Phosphogluconate dehydratase (EC 4.2.1.12)
*
Ralstonia pickettii 12J

Site:
position = -231
score = 5.68225
sequence = TTGTAGTATTACTACAA

Site:
position = -55
score = 4.17786
sequence = TTGTAGgAAAatTACAg

Gene: Rpic_4868: Phosphogluconate dehydratase (EC 4.2.1.12)
*
Ralstonia metallidurans CH34

Site:
position = -209
score = 4.89238
sequence = ATGTAGAGATTCTACAC

Site:
position = -67
score = 5.7016
sequence = ATGTAGAAATTCTACAT

Gene: Rmet_1045: Phosphogluconate dehydratase (EC 4.2.1.12)
*
Ralstonia eutropha JMP134

Site:
position = -203
score = 5.83478
sequence = ATGTAGATATTCTACAA

Site:
position = -62
score = 5.7016
sequence = ATGTAGAAAATCTACAT

Gene: Reut_A1081: Phosphogluconate dehydratase (EC 4.2.1.12)
*
Ralstonia eutropha H16

Site:
position = -222
score = 5.21834
sequence = ATGTAGAGATTCTACAT

Site:
position = -71
score = 5.30184
sequence = CTGTAGAAAATCTACAT

Gene: H16_A1178: Phosphogluconate dehydratase (EC 4.2.1.12)
*
Cupriavidus taiwanensis

Site:
position = -223
score = 5.21834
sequence = ATGTAGAGATTCTACAT

Site:
position = -71
score = 4.90207
sequence = CTGTAGAAAATCTACAG

Gene: RALTA_A1158: Phosphogluconate dehydratase (EC 4.2.1.12)
Phosphogluconate dehydratase (EC 4.2.1.12)
 
CRON 2.
hexR
 
Ralstonia solanacearum GMI1000

Gene: RSp1556: Central carbohydrate metabolism transcription regulator HexR, RpiR family
 
Ralstonia pickettii 12J

Gene: Rpic_4864: Central carbohydrate metabolism transcription regulator HexR, RpiR family
*
Ralstonia metallidurans CH34

Site:
position = -248
score = 5.7016
sequence = ATGTAGAATTTCTACAT

Site:
position = -106
score = 4.89238
sequence = GTGTAGAATCTCTACAT

Gene: Rmet_1044: Central carbohydrate metabolism transcription regulator HexR, RpiR family
*
Ralstonia eutropha JMP134

Site:
position = -166
score = 5.7016
sequence = ATGTAGATTTTCTACAT

Site:
position = -25
score = 5.83478
sequence = TTGTAGAATATCTACAT

Gene: Reut_A1080: Central carbohydrate metabolism transcription regulator HexR, RpiR family
*
Ralstonia eutropha H16

Site:
position = -200
score = 5.30184
sequence = ATGTAGATTTTCTACAG

Site:
position = -49
score = 5.21834
sequence = ATGTAGAATCTCTACAT

Gene: H16_A1177: Central carbohydrate metabolism transcription regulator HexR, RpiR family
*
Cupriavidus taiwanensis

Site:
position = -201
score = 4.90207
sequence = CTGTAGATTTTCTACAG

Site:
position = -49
score = 5.21834
sequence = ATGTAGAATCTCTACAT

Gene: RALTA_A1157: Central carbohydrate metabolism transcription regulator HexR, RpiR family
Central carbohydrate metabolism transcription regulator HexR, RpiR family
 
CRON 3.
zwf
*
Ralstonia solanacearum GMI1000

Site:
position = -338
score = 4.57763
sequence = ATGTAATTTTCCTACAA

Site:
position = -160
score = 5.54907
sequence = ATGTAGTAATACTACAA

Gene: RSp1559: Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
*
Ralstonia pickettii 12J

Site:
position = -269
score = 4.17786
sequence = CTGTAATTTTCCTACAA

Site:
position = -93
score = 5.68225
sequence = TTGTAGTAATACTACAA

Gene: Rpic_4867: Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
 
Ralstonia metallidurans CH34

Gene: Rmet_5801: Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
 
Ralstonia eutropha JMP134

Gene: Reut_B5329: Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
 
Ralstonia eutropha H16

Gene: H16_B2566: Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
 
Cupriavidus taiwanensis

Gene: RALTA_B2296: Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
pgl
 
Ralstonia solanacearum GMI1000

Gene: RSp1558: 6-phosphogluconolactonase (EC 3.1.1.31), eukaryotic type
 
Ralstonia pickettii 12J

Gene: Rpic_4866: 6-phosphogluconolactonase (EC 3.1.1.31), eukaryotic type
 
Ralstonia metallidurans CH34

Gene: Rmet_5800: 6-phosphogluconolactonase (EC 3.1.1.31), eukaryotic type
 
Ralstonia eutropha JMP134

Gene: Reut_B5328: 6-phosphogluconolactonase (EC 3.1.1.31), eukaryotic type
 
Ralstonia eutropha H16

Gene: H16_B2565: 6-phosphogluconolactonase (EC 3.1.1.31), eukaryotic type
 
Cupriavidus taiwanensis

Gene: RALTA_B2295: 6-phosphogluconolactonase (EC 3.1.1.31), eukaryotic type
6-phosphogluconolactonase (EC 3.1.1.31), eukaryotic type
glk
 
Ralstonia solanacearum GMI1000

Gene: RSp1557: Glucokinase (EC 2.7.1.2)
 
Ralstonia pickettii 12J

Gene: Rpic_4865: Glucokinase (EC 2.7.1.2)
 
Ralstonia metallidurans CH34

Gene: Rmet_5799: Glucokinase (EC 2.7.1.2)
 
Ralstonia eutropha JMP134

Gene: Reut_B5327: Glucokinase (EC 2.7.1.2)
 
Ralstonia eutropha H16

Gene: H16_B2564: Glucokinase (EC 2.7.1.2)
 
Cupriavidus taiwanensis

Gene: RALTA_B2294: Glucokinase (EC 2.7.1.2)
Glucokinase (EC 2.7.1.2)
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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