Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Collections of draft regulons reconstructed by automated conservative propagation

Reference TF regulogs manually curated in the selected subset of genomes from 14 taxonomic groups were used for large-scale annotation of regulatory interactions in all closely related genomes from the same taxa. The propagated regulons were obtained by an automated conservative propagation procedure and represents a large set of draft regulons. more

Template (reference) regulons Propagated regulons
Regulog collection Genomes TF regulons Taxonomic group Genomes TF regulons
Bacillales 11 901 Bacillales 68 3719
Shewanellaceae 16 911 Alteromonadales 39 1444
Staphylococcaceae 7 281 Staphylococcaceae 25 852
Thermotogales 11 245 Thermotogales 11 223
Desulfovibrionales 10 428 Desulfovibrionales 11 340
Corynebacteriaceae 8 262 Corynebacteriaceae 9 234
Bacteroidaceae 11 223 Bacteroidaceae 22 254
Ralstonia 6 277 Burkholderiaceae 74 998
Enterobacteriales 12 812 Enterobacteriales 160 8920
Cyanobacteria 14 182 Cyanobacteria 48 510
Lactobacillaceae 15 485 Lactobacillales 29 855
Streptococcaceae 15 595 Streptococcaceae 69 2644
Clostridiaceae 20 0 Clostridia 61 144
Chloroflexi 5 107 Chloroflexi 14 139