Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Propagation of HTCS_Hya regulog to Bacteroides finegoldii DSM 17565

Reference regulog properties
Source regulog: HTCS_Hya - Bacteroidaceae
Regulator type: Transcription factor
Regulator family: [Other]
Regulation mode:
Biological process: Hyaluronan utilization; Chondroitin sulphate utilization
Effector: Hyaluronan; Chondroitin sulphate
Phylum: Bacteroidetes
Propagated regulon:
Target genome Bacteroides finegoldii DSM 17565
Orthologous TF(s) BACFIN_00030, BACFIN_00031
Regulated genes 2
Built upon 13 sites [see more]
Predicted regulatory interactions in Bacteroides finegoldii DSM 17565
Locus tag Position Score Sequence
Position: -99
Score: 8.6
Sequence: TGTACTATTTT-(10)-TGTACATTACT
Locus tag: BACFIN_00032
BACFIN_00032 -99 8.6 TGTACTATTTT-(10)-TGTACATTACT
Supported by regulated orthologs from reference regulons
Ortholog gene name: hyaS
Ortholog function: Arylsulfatase C (EC 3.1.6.1)
Bacteroides cellulosilyticus DSM 14838 BACCELL_01636 -98 8.2 TGTACGTTTTT-(10)-TGTACTCTACT
Bacteroides eggerthii DSM 20697 BACEGG_03395 -98 7.8 TGGACTTTTCA-(10)-TGTACTATTCT
Bacteroides ovatus ATCC 8483 BACOVA_01997 -100 8.6 TGTACTATTTT-(10)-TGTACATTCCT
Bacteroides stercoris ATCC 43183 BACSTE_02459 -98 8 TGTACTTTTTA-(10)-TGTACTCTTTT
Bacteroides thetaiotaomicron VPI-5482 BT3333 -98 8.3 TGGACTATTTT-(10)-TGTACATTCCT
Position: -105
Score: 8
Sequence: TGTATGTTTTT-(10)-TGAATAATTTT
Locus tag: BACFIN_00044
BACFIN_00044 -105 8 TGTATGTTTTT-(10)-TGAATAATTTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: susC_Hya-1
Ortholog function: TonB-dependent outer membrane transporter of hyaluronan oligomers
Bacteroides cellulosilyticus DSM 14838 BACCELL_01637 -132 8.3 TGTACAAATTC-(10)-CGAACTATTAA
Bacteroides eggerthii DSM 20697 BACEGG_03393 -129 7.7 TGTACAAAATT-(10)-CGAACGATTAC
Bacteroides ovatus ATCC 8483 BACOVA_01998 -139 8.6 TGTATGATTTT-(10)-TGAATAATTCT
Bacteroides plebeius DSM 17135 BACPLE_00367 -86 7.5 TGAACTATTTT-(10)-TCTATAATAAA
Bacteroides stercoris ATCC 43183 BACSTE_02277 -94 8.3 TGTATGAATTT-(10)-TGGACAATTAC
Bacteroides thetaiotaomicron VPI-5482 BT3332 -140 8.7 TGTATTATTTT-(10)-TGAATAATTCT