Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of KdgR regulog to Bacteroides dorei DSM 17855

Reference regulog properties
Source regulog: KdgR - Bacteroidaceae
Regulator type: Transcription factor
Regulator family: LacI
Regulation mode: repressor
Biological process: Glucuronate utilization; Galacturonate utilization
Effector: 2-keto-3-deoxygluconate
Phylum: Bacteroidetes
Propagated regulon:
Target genome Bacteroides dorei DSM 17855
Orthologous TF(s) BACDOR_02922
Regulated genes 3
Built upon 62 sites [see more]
Predicted regulatory interactions in Bacteroides dorei DSM 17855
Locus tag Position Score Sequence
Position: -228
Score: 5.5
Sequence: ATTGTGCTCGTACACACT
Locus tag: BACDOR_02921
BACDOR_02921 -228 5.5 ATTGTGCTCGTACACACT
Supported by regulated orthologs from reference regulons
Ortholog gene name: kdgK
Ortholog function: 2-dehydro-3-deoxygluconate kinase (EC 2.7.1.45)
Bacteroides dorei DSM 17855 BACDOR_02921 -228 5.5 ATTGTGCTCGTACACACT
-145 5.4 TTTGTGCACGCACACGGA
Bacteroides eggerthii DSM 20697 BACEGG_01788 -227 6 TTTGTGTTCGTACACAAT
-145 5.9 TTTGTGCCCGCACACGAA
Bacteroides fragilis NCTC 9343 BF2719 -228 5.7 TTTGTGCCCGGACACACT
-146 5.5 TTTGTGTCCGCACACGGA
Bacteroides ovatus ATCC 8483 BACOVA_03830 -228 6 TTTGTGCTCGCACACAAT
-146 5.9 TTTGTGCCCGCACACGAA
Bacteroides plebeius DSM 17135 BACPLE_00831 -112 6.1 TTTGTGTGCGTACACAAA
Bacteroides stercoris ATCC 43183 BACSTE_00505 -228 5.9 TTTGTGCCCGTGCACAAT
-146 5.9 TTTGTGCCCGCACACGAA
Bacteroides thetaiotaomicron VPI-5482 BT0488 -228 5.6 TATGTGCTCGCACACAAT
-146 5.9 TTTGTGCCCGCACACGAA
Bacteroides uniformis ATCC 8492 BACUNI_01828 -231 5.6 CTTGTGCTCGCACACAAT
-149 5.8 TTTGTGCCCGTACACGAA
Bacteroides vulgatus ATCC 8482 BVU_3055 -228 5.5 ATTGTGCTCGTGCACACT
-145 5.4 TTTGTGCACGCACACGGA
Position: -32
Score: 5.5
Sequence: AGTGTGTACGAGCACAAT
Locus tag: BACDOR_02922
BACDOR_02922 -32 5.5 AGTGTGTACGAGCACAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: kdgR
Ortholog function: Predicted transcriptional regulator for altronate catabolism, LacI family
Bacteroides cellulosilyticus DSM 14838 BACCELL_04099 -154 5.6 ATTGTGTGCGGACACAAC
Bacteroides dorei DSM 17855 BACDOR_02922 -115 5.4 TCCGTGTGCGTGCACAAA
-32 5.5 AGTGTGTACGAGCACAAT
Bacteroides eggerthii DSM 20697 BACEGG_01787 39 5.9 TTCGTGTGCGGGCACAAA
121 6 ATTGTGTACGAACACAAA
Bacteroides fragilis NCTC 9343 BF2720 -125 5.5 TCCGTGTGCGGACACAAA
-43 5.7 AGTGTGTCCGGGCACAAA
Bacteroides ovatus ATCC 8483 BACOVA_03831 -125 5.9 TTCGTGTGCGGGCACAAA
-43 6 ATTGTGTGCGAGCACAAA
Bacteroides plebeius DSM 17135 BACPLE_00833 -123 6.1 TTTGTGTACGCACACAAA
Bacteroides stercoris ATCC 43183 BACSTE_00506 39 5.9 TTCGTGTGCGGGCACAAA
121 5.9 ATTGTGCACGGGCACAAA
Bacteroides thetaiotaomicron VPI-5482 BT0487 -124 5.9 TTCGTGTGCGGGCACAAA
-42 5.6 ATTGTGTGCGAGCACATA
Bacteroides uniformis ATCC 8492 BACUNI_01826 -210 5.8 TTCGTGTACGGGCACAAA
-128 5.6 ATTGTGTGCGAGCACAAG
Bacteroides vulgatus ATCC 8482 BVU_3054 -116 5.4 TCCGTGTGCGTGCACAAA
-33 5.5 AGTGTGCACGAGCACAAT
Position: -25
Score: 4.5
Sequence: TTCGTGTGCGAAAACGGT
Position: -3
Score: 4.5
Sequence: TTTGTGCACGATAACGAT
Locus tag: BACDOR_03279
BACDOR_03279 -25 4.5 TTCGTGTGCGAAAACGGT
-3 4.5 TTTGTGCACGATAACGAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: sgcC
Ortholog function: putative phosphotransferase enzyme II, C component
Bacteroides dorei DSM 17855 BACDOR_03279 -25 4.5 TTCGTGTGCGAAAACGGT
-3 4.5 TTTGTGCACGATAACGAT
Bacteroides eggerthii DSM 20697 BACEGG_00862 -182 4.9 TTCGTGTACGAAAACGAA
-160 4.1 TTTGTGCACGATAACGAC
Bacteroides ovatus ATCC 8483 BACOVA_04898 -193 4.5 TTCGTGCACGGAAACGAC
-171 4.3 TTTGTGCACGCAAACGTC
Bacteroides plebeius DSM 17135 BACPLE_00506 -154 4.6 TCCGTGTGCGTAAACGAA
Bacteroides stercoris ATCC 43183 BACSTE_03306 -182 4.9 TTCGTGTACGAAAACGAA
-160 4.1 TTTGTGCACGATAACGAC
Bacteroides thetaiotaomicron VPI-5482 BT4107 -194 4.5 TTCGTGCACGGAAACGAC
-172 4.2 TTTGTGCACGTAAACGTC
Bacteroides uniformis ATCC 8492 BACUNI_03601 -183 4.6 TTCGTGTACGAAAACGAG
-161 4.1 TTTGTGCACGATAACGAC
Bacteroides vulgatus ATCC 8482 BVU_1796 -181 4.5 TTCGTGTGCGAAAACGGT
-159 4.5 TTTGTGCACGATAACGAT