Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Propagation of NanR regulog to Bacteroides thetaiotaomicron VPI-5482

Reference regulog properties
Source regulog: NanR - Bacteroidaceae
Regulator type: Transcription factor
Regulator family: ROK
Regulation mode: repressor
Biological process: Sialic acid utilization; N-acetylglucosamine utilization
Effector: N-acetylglucosamine; N-acetylneuraminic acid
Phylum: Bacteroidetes
Propagated regulon:
Target genome Bacteroides thetaiotaomicron VPI-5482
Orthologous TF(s) BT0433
Regulated genes 6
Built upon 59 sites [see more]
Predicted regulatory interactions in Bacteroides thetaiotaomicron VPI-5482
Locus tag Position Score Sequence
Position: -267
Score: 5.9
Sequence: TAGATAATAAAATATTTTATTAA
Position: -264
Score: 6.3
Sequence: ATAATAAAATATTTTATTAATAA
Position: -55
Score: 4.7
Sequence: TTAGTTAATAAAAAAATTAATTA
Position: -54
Score: 5
Sequence: TAGTTAATAAAAAAATTAATTAT
Position: -51
Score: 5.8
Sequence: TTAATAAAAAAATTAATTATCTT
Locus tag: BT0433
BT0433 -267 5.9 TAGATAATAAAATATTTTATTAA
-264 6.3 ATAATAAAATATTTTATTAATAA
-55 4.7 TTAGTTAATAAAAAAATTAATTA
-54 5 TAGTTAATAAAAAAATTAATTAT
-51 5.8 TTAATAAAAAAATTAATTATCTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: nanR
Ortholog function: Putative N-acetylglucosamine repressor of sialic acid catabolism, ROK family
Bacteroides cellulosilyticus DSM 14838 BACCELL_04950 -37 5.5 ATATTAATAAAATTATTAAGTAT
Bacteroides dorei DSM 17855 BACDOR_00695 -217 5.5 AAACTAAATTTATTTATTAATAA
Bacteroides eggerthii DSM 20697 BACEGG_02291 -58 6.2 TAATTAATAAATTATTTTATTAT
Bacteroides fragilis NCTC 9343 BF1711 -52 4.8 TTAATAAACAAATTAACTATCTT
Bacteroides ovatus ATCC 8483 BACOVA_01791 -50 5.8 TTAATAAAAAAATTAATTATCTT
Bacteroides plebeius DSM 17135 BACPLE_00597 -88 5.4 TAAATATAATAATTTATTAATGA
Bacteroides stercoris ATCC 43183 BACSTE_01902 -242 6 TATATAATAAATTATTTTATTAT
Bacteroides thetaiotaomicron VPI-5482 BT0433 -51 5.8 TTAATAAAAAAATTAATTATCTT
Bacteroides uniformis ATCC 8492 BACUNI_02075 -52 5.1 AATTTACAAAATTATTTTAGTAT
Bacteroides vulgatus ATCC 8482 BVU_4116 -190 5.5 AAACTAAATTTATTTATTAATAA
Position: -98
Score: 6.3
Sequence: TTATTAATAAAATATTTTATTAT
Locus tag: BT0434
BT0434 -98 6.3 TTATTAATAAAATATTTTATTAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: BT0434
Ortholog function: NTP pyrophosphohydrolases including oxidative damage repair enzymes
Bacteroides thetaiotaomicron VPI-5482 BT0434 -98 6.3 TTATTAATAAAATATTTTATTAT
-95 5.9 TTAATAAAATATTTTATTATCTA
Position: -34
Score: 4.9
Sequence: AATATAAAATATTAATATAACAA
Position: -26
Score: 4.7
Sequence: ATATTAATATAACAAGATAATAA
Locus tag: BT1743
BT1743 -34 4.9 AATATAAAATATTAATATAACAA
-26 4.7 ATATTAATATAACAAGATAATAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: estS
Ortholog function: Sialic acid-specific 9-O-acetylesterase
Bacteroides dorei DSM 17855 BACDOR_00666 -47 4.8 ATTTCAATAAAAACTTTTATTTT
Bacteroides fragilis NCTC 9343 BF1809 -91 5.6 TATATAATAAAATATTTAATTAA
-88 6.1 ATAATAAAATATTTAATTAATAT
-27 5.1 ATATTAATAAATAATAGTATTGA
Bacteroides vulgatus ATCC 8482 BVU_4140 -47 4.8 ATTTCAATAAAAACTTTTATTTT
Position: -39
Score: 4.8
Sequence: ATAATAATCAATTAATTAATCTT
Locus tag: BT2055
BT2055 -39 4.8 ATAATAATCAATTAATTAATCTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: exbB
Ortholog function: Outer membrane transport system, transport protein ExbB
Bacteroides cellulosilyticus DSM 14838 BACCELL_01010 -44 5.7 ATAATAAACAAATTAATTAATTA
Bacteroides coprophilus DSM 18228 BACCOPRO_02433 -43 5 TTTATAAACTATTAATTAATTAA
Bacteroides eggerthii DSM 20697 BACEGG_00309 -44 5.5 ATAATAAGTAATTTAATTAATTA
Bacteroides fragilis NCTC 9343 BF3530 -43 5.5 ATAATAATAATTTAATTAATTAA
Bacteroides ovatus ATCC 8483 BACOVA_00648 -39 4.8 ATAATAATCAATTAATTAATCTT
Bacteroides stercoris ATCC 43183 BACSTE_03148 -44 5.5 ATAATAAGTAATTTAATTAATTA
Bacteroides thetaiotaomicron VPI-5482 BT2055 -39 4.8 ATAATAATCAATTAATTAATCTT
Bacteroides uniformis ATCC 8492 BACUNI_01658 -44 5.9 ATAATAAATAAATTAATTAATTA