Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Propagation of Crp regulog to Bacteroides thetaiotaomicron VPI-5482

Reference regulog properties
Source regulog: Crp - Bacteroidaceae
Regulator type: Transcription factor
Regulator family: CRP
Regulation mode: activator
Biological process:
Effector:
Phylum: Bacteroidetes
Propagated regulon:
Target genome Bacteroides thetaiotaomicron VPI-5482
Orthologous TF(s) BT4338
Regulated genes 14
Built upon 113 sites [see more]
Predicted regulatory interactions in Bacteroides thetaiotaomicron VPI-5482
Locus tag Position Score Sequence
Position: -105
Score: 6.2
Sequence: TTTTATGTTGCACAACATATAA
Locus tag: BT0356
BT0356 -105 6.2 TTTTATGTTGCACAACATATAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: araM
Ortholog function: Aldose 1-epimerase (EC 5.1.3.3), L-arabinose mutarotase
Bacteroides cellulosilyticus DSM 14838 BACCELL_05604 -105 6 TTTTATGTTACATAACATATAC
Bacteroides dorei DSM 17855 BACDOR_03634 -104 5.6 TTTTATGTTGCACAACATACTC
Bacteroides eggerthii DSM 20697 BACEGG_01536 -105 6.1 TTTTATGTTACATAACATACAA
Bacteroides ovatus ATCC 8483 BACOVA_01715 -105 5.9 ATTTATGCTGCACAACATATAA
Bacteroides plebeius DSM 17135 BACPLE_02214 -89 4.9 TTCTATGTTGAAAAACATCTGA
Bacteroides thetaiotaomicron VPI-5482 BT0356 -105 6.2 TTTTATGTTGCACAACATATAA
Bacteroides uniformis ATCC 8492 BACUNI_01357 -48 5.7 ACTTATGTTGCATAACATATAA
Bacteroides vulgatus ATCC 8482 BVU_2324 -104 5.6 TTTTATGTTGCACAACATACTC
Position: -81
Score: 4.2
Sequence: AACAATGTTTTATAGCATGTCA
Locus tag: BT0791
BT0791 -81 4.2 AACAATGTTTTATAGCATGTCA
Supported by regulated orthologs from reference regulons
Ortholog gene name: xylR
Ortholog function: Predicted regulator of xylose utilization, NrtR family
Bacteroides cellulosilyticus DSM 14838 BACCELL_04758 -83 4.9 AATAGTGCTTTATAACATAATA
Bacteroides dorei DSM 17855 BACDOR_00865 -34 4.8 AATAGTGTTTTAGAACATAATA
Bacteroides eggerthii DSM 20697 BACEGG_02642 -92 4.8 AATAATGCTTTGTAACATATCA
Bacteroides fragilis NCTC 9343 BF2354 -81 4.6 AACAATGCTTTATAGCATATTA
Bacteroides ovatus ATCC 8483 BACOVA_02532 -80 4.2 AACAATGTTTTATAGCATGTTT
Bacteroides stercoris ATCC 43183 BACSTE_01380 -92 4.3 AATAATGCTTTATAACATTGTA
Bacteroides thetaiotaomicron VPI-5482 BT0791 -81 4.2 AACAATGTTTTATAGCATGTCA
Bacteroides uniformis ATCC 8492 BACUNI_00695 -92 4.1 AATAATGCTTTATAATATTATA
Bacteroides vulgatus ATCC 8482 BVU_3955 -100 4.5 AATAGTGTTTTGGAACATAATA
Position: -67
Score: 6.3
Sequence: TTTTATGTTATTTAGCATAAAA
Locus tag: BT0832
BT0832 -67 6.3 TTTTATGTTATTTAGCATAAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: serB
Ortholog function: Phosphoserine phosphatase (EC 3.1.3.3)
Bacteroides cellulosilyticus DSM 14838 BACCELL_04825 -163 5.5 TTTCATGTTATATAACATGTTT
Bacteroides coprophilus DSM 18228 BACCOPRO_01694 -134 5.6 AATTATGCTTTTAAACATAAAT
Bacteroides dorei DSM 17855 BACDOR_02848 -116 6.1 AAATATGTTATATAGCATAAAA
Bacteroides eggerthii DSM 20697 BACEGG_02676 -74 6.3 TTTTATGTTATTTAGCATAAAA
Bacteroides fragilis NCTC 9343 BF2389 -71 6.2 TTTTATGTTATTTAGCATAAAT
Bacteroides ovatus ATCC 8483 BACOVA_02567 -66 6.3 TTTTATGTTATTTAGCATAAAA
Bacteroides stercoris ATCC 43183 BACSTE_01424 -74 6.3 TTTTATGTTATTTAGCATAAAA
Bacteroides thetaiotaomicron VPI-5482 BT0832 -67 6.3 TTTTATGTTATTTAGCATAAAA
Bacteroides uniformis ATCC 8492 BACUNI_00649 -75 6.2 TTTTATGTTATTTAGCATAAAT
Bacteroides vulgatus ATCC 8482 BVU_3158 -116 6.1 AAATATGTTATATAGCATAAAA
Position: -100
Score: 5.5
Sequence: TTTCCTGCTATAGAACATATTA
Locus tag: BT1272
BT1272 -100 5.5 TTTCCTGCTATAGAACATATTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: fucR
Ortholog function: Transcriptional regulator of fucose utilization, GntR family
Bacteroides cellulosilyticus DSM 14838 BACCELL_04988 -124 5.2 TTATATGCTGCAAAACATATCC
Bacteroides dorei DSM 17855 BACDOR_02265 -114 5.1 TCTTGTGTTATAAAACATACCA
Bacteroides fragilis NCTC 9343 BF0210 -114 5.6 TTTGATGTTGTATAACATACCA
Bacteroides ovatus ATCC 8483 BACOVA_03849 -100 5.8 TTTTCTGCTATAAAACATATCA
Bacteroides plebeius DSM 17135 BACPLE_02898 -93 4.6 AAATCTGTTCTTAAACATAGCT
Bacteroides thetaiotaomicron VPI-5482 BT1272 -100 5.5 TTTCCTGCTATAGAACATATTA
Bacteroides vulgatus ATCC 8482 BVU_1374 -114 5 TCTTGTGTTATAAAACATACCT
Position: -207
Score: 5.1
Sequence: TCTTATGTTTAACAACATACGT
Locus tag: BT1434
BT1434 -207 5.1 TCTTATGTTTAACAACATACGT
Supported by regulated orthologs from reference regulons
Ortholog gene name: uxuR
Ortholog function: Predicted transcriptional regulator for glucuronate catabolism, LacI family
Bacteroides ovatus ATCC 8483 BACOVA_00860 -162 5.3 TCTTATGTTTAACAACATGTAT
Bacteroides thetaiotaomicron VPI-5482 BT1434 -207 5.1 TCTTATGTTTAACAACATACGT
Position: -77
Score: 4.8
Sequence: CTGTATGTTGTAAAACACATAC
Locus tag: BT2096
BT2096 -77 4.8 CTGTATGTTGTAAAACACATAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: BT1272
Ortholog function: Transcriptional regulator, GntR family
Bacteroides fragilis NCTC 9343 BF0315 -90 5.7 TATTATGTTACAAAACATATAC
Bacteroides thetaiotaomicron VPI-5482 BT2096 -77 4.8 CTGTATGTTGTAAAACACATAC
Position: -111
Score: 4.8
Sequence: GTATGTGTTTTACAACATACAG
Locus tag: BT2097
BT2097 -111 4.8 GTATGTGTTTTACAACATACAG
Supported by regulated orthologs from reference regulons
Ortholog gene name: COG3533
Ortholog function: Six-hairpin glycosidase-like, COG3533 family
Bacteroides thetaiotaomicron VPI-5482 BT2097 -111 4.8 GTATGTGTTTTACAACATACAG
Position: -135
Score: 5.4
Sequence: TTTTATGCTATAAAACATATCG
Locus tag: BT2178
BT2178 -135 5.4 TTTTATGCTATAAAACATATCG
Supported by regulated orthologs from reference regulons
Ortholog gene name: BACCELL_00794
Ortholog function: hypothetical protein
Bacteroides cellulosilyticus DSM 14838 BACCELL_00794 -135 6.1 TTTTATGTTATAAAACATATTT
Bacteroides dorei DSM 17855 BACDOR_04003 -33 4.5 TTTTAGGTTTAACAAATTAAAA
Bacteroides eggerthii DSM 20697 BACEGG_00156 -129 5.5 TTTTGTGTTATAAAACATATTC
Bacteroides fragilis NCTC 9343 BF3646 -151 6 TTTTATGTTGAATAACATATTT
Bacteroides ovatus ATCC 8483 BACOVA_03166 -135 5.8 TTTTATGCTATAAAACATATTC
Bacteroides plebeius DSM 17135 BACPLE_00736 -116 5.5 TTTTATGTTATCCAACATATTC
Bacteroides stercoris ATCC 43183 BACSTE_03638 -132 5.7 TTTTGTGTTATAAAACATAATC
Bacteroides thetaiotaomicron VPI-5482 BT2178 -135 5.4 TTTTATGCTATAAAACATATCG
Bacteroides uniformis ATCC 8492 BACUNI_03316 -125 5.7 TTTTGTGTTATAAAACATATAC
Bacteroides vulgatus ATCC 8482 BVU_2553 -33 4.5 TTTTAGGTTTAACAAATTAAAA
Position: -69
Score: 5
Sequence: TTCCATGCTTTAAAACAGAATT
Locus tag: BT2831
BT2831 -69 5 TTCCATGCTTTAAAACAGAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: PF01694
Ortholog function: Peptidase S54, rhomboid domain
Bacteroides cellulosilyticus DSM 14838 BACCELL_02471 -196 5 TAATATGTTACACAAAAGATAT
-62 5.8 TTTTCTGTTATAGAACAGAATT
Bacteroides dorei DSM 17855 BACDOR_01705 -71 6.2 TTTTCTGTTATATAACAGAATA
Bacteroides eggerthii DSM 20697 BACEGG_03101 -188 5.3 TAATATGTTACACAAAAGAAAA
-61 5.8 TTTTCTGTTATAGAACAGAATT
Bacteroides fragilis NCTC 9343 BF4221 -227 5 ATATATGTTACACAAAAGATAT
-105 5.7 TTTTCTGTTGTAGAACAGAATT
Bacteroides ovatus ATCC 8483 BACOVA_02079 -195 5 ATATATGTTACACAAAAGATTA
-66 5.4 TTTCATGCTTTAAAACAGAATT
Bacteroides stercoris ATCC 43183 BACSTE_02140 -188 4.3 TTAATTGTTACACAAAAGAAAA
-61 5.8 TTTTCTGTTATAGAACAGAATT
Bacteroides thetaiotaomicron VPI-5482 BT2831 -192 4.9 ATATATGTTACACAAAAGATTT
-69 5 TTCCATGCTTTAAAACAGAATT
Bacteroides uniformis ATCC 8492 BACUNI_03999 -230 5 TAATATGTTACACAAAAGATAT
-97 5.8 TTTTCTGTTATAGAACAGAATT
Bacteroides vulgatus ATCC 8482 BVU_0995 -71 6.2 TTTTCTGTTATATAACAGAATA
Position: -271
Score: 5.7
Sequence: CATTATGTTCTATAACATAAAA
Locus tag: BT4330
BT4330 -271 5.7 CATTATGTTCTATAACATAAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: nupG
Ortholog function: Nucleoside permease NupG
Bacteroides eggerthii DSM 20697 BACEGG_01333 -193 5.8 GACTATGTTATATAACATAAAA
Bacteroides ovatus ATCC 8483 BACOVA_05132 -269 5.6 CATTATGTTGTATAACATAAAC
Bacteroides thetaiotaomicron VPI-5482 BT4330 -271 5.7 CATTATGTTCTATAACATAAAA
Bacteroides uniformis ATCC 8492 BACUNI_01546 -245 5 CAGCATGTTATATAACATAAAC
Position: -33
Score: 4.8
Sequence: TTTTGTGCTGTATAACACAGTT
Locus tag: BT4338
BT4338 -33 4.8 TTTTGTGCTGTATAACACAGTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: crp
Ortholog function: transcriptional regulator, Crp/Fnr family
Bacteroides cellulosilyticus DSM 14838 BACCELL_03476 -33 4.7 ATTTGTGCTGTATAACACAGTT
Bacteroides coprophilus DSM 18228 BACCOPRO_01276 -33 4.6 TTTTGTGCTTAATAACACGATT
Bacteroides dorei DSM 17855 BACDOR_01607 -35 4.1 ATTTGTGCTCTATAACACGGTT
Bacteroides eggerthii DSM 20697 BACEGG_01340 -33 4.6 ATTTGTGCTGTACAACACAGTT
Bacteroides fragilis NCTC 9343 BF0954 -33 4.6 ATTTGTGCTTTATAACACAGTT
Bacteroides ovatus ATCC 8483 BACOVA_05152 -33 4.8 TTTTGTGCTGTATAACACAGTT
Bacteroides plebeius DSM 17135 BACPLE_02167 -16 4.1 CTTTGTGCTTAATAACATGGTT
Bacteroides stercoris ATCC 43183 BACSTE_03515 -33 4.6 ATTTGTGCTGTACAACACAGTT
Bacteroides thetaiotaomicron VPI-5482 BT4338 -33 4.8 TTTTGTGCTGTATAACACAGTT
Bacteroides uniformis ATCC 8492 BACUNI_04721 -33 4.7 ATTTGTGCTGTATAACACAGTT
Bacteroides vulgatus ATCC 8482 BVU_3580 -35 4.1 ATTTGTGCTCTATAACACGGTT
Position: -114
Score: 6.1
Sequence: TTTTATGTTGAAAAGCATAAAA
Locus tag: BT4738
BT4738 -114 6.1 TTTTATGTTGAAAAGCATAAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: pflB
Ortholog function: Pyruvate formate-lyase (EC 2.3.1.54)
Bacteroides cellulosilyticus DSM 14838 BACCELL_03929 -107 6 TTTTATGTCGTACAACATAAAA
Bacteroides eggerthii DSM 20697 BACEGG_01611 -4 6.1 TTTTATGTTCTTCAGCATAAAA
Bacteroides fragilis NCTC 9343 BF1323 -107 6.3 TTTTATGCTATTCAACATAAAA
Bacteroides ovatus ATCC 8483 BACOVA_05597 -113 6.1 TTTTATGTTGAAAAGCATAAAA
Bacteroides stercoris ATCC 43183 BACSTE_00806 -116 6.1 TTTTATGCTCTTCAACATAAAA
Bacteroides thetaiotaomicron VPI-5482 BT4738 -114 6.1 TTTTATGTTGAAAAGCATAAAA
Bacteroides uniformis ATCC 8492 BACUNI_04526 -117 6.2 TTTTATGCTGTTCAACATAAAA