Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Propagation of HTCS_Aga-1 regulog to Bacteroides thetaiotaomicron VPI-5482

Reference regulog properties
Source regulog: HTCS_Aga-1 - Bacteroidaceae
Regulator type: Transcription factor
Regulator family: [Other]
Regulation mode: activator
Biological process: Arabinogalactan utilization
Effector: Arabinogalactan oligosaccharides
Phylum: Bacteroidetes
Propagated regulon:
Target genome Bacteroides thetaiotaomicron VPI-5482
Orthologous TF(s) BT0267
Regulated genes 3
Built upon 3 sites [see more]
Predicted regulatory interactions in Bacteroides thetaiotaomicron VPI-5482
Locus tag Position Score Sequence
Position: -121
Score: 9.3
Sequence: TTATTTATTACTG-(8)-TGAATGATTATAG
Locus tag: BT0262
BT0262 -121 9.3 TTATTTATTACTG-(8)-TGAATGATTATAG
Supported by regulated orthologs from reference regulons
Ortholog gene name: BT0262
Ortholog function: Putative hydrolase
Bacteroides thetaiotaomicron VPI-5482 BT0262 -121 9.3 TTATTTATTACTG-(8)-TGAATGATTATAG
Bacteroides thetaiotaomicron VPI-5482 BT0263 -121 9.3 TTATTTATTACTG-(8)-TGAATGATTATAG
Position: -238
Score: 10.4
Sequence: TGGTCTATTTTTA-(8)-TGAATGATTTTTA
Locus tag: BT0266
BT0266 -238 10.4 TGGTCTATTTTTA-(8)-TGAATGATTTTTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: BT0266
Ortholog function: Putative cellobiosidase/xylanase
Bacteroides thetaiotaomicron VPI-5482 BT0266 -238 10.4 TGGTCTATTTTTA-(8)-TGAATGATTTTTA
Position: -127
Score: 10.7
Sequence: TGGTCCAATTTTG-(8)-TGAATGATTAGAG
Locus tag: BT0268
BT0268 -127 10.7 TGGTCCAATTTTG-(8)-TGAATGATTAGAG
Supported by regulated orthologs from reference regulons
Ortholog gene name: susC_Aga-1
Ortholog function: TonB-dependent outer membrane transporter of arabinogalactan oligomers
Bacteroides thetaiotaomicron VPI-5482 BT0268 -127 10.7 TGGTCCAATTTTG-(8)-TGAATGATTAGAG