Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Propagation of HTCS_Rgu-1 regulog to Bacteroides ovatus ATCC 8483

Reference regulog properties
Source regulog: HTCS_Rgu-1 - Bacteroidaceae
Regulator type: Transcription factor
Regulator family: [Other]
Regulation mode: activator
Biological process: Rhamnogalacturonides utilization
Effector: Rhamogalacturonate oligosaccharides; Galacturonate oligosaccharides
Phylum: Bacteroidetes
Propagated regulon:
Target genome Bacteroides ovatus ATCC 8483
Orthologous TF(s) BACOVA_04931, BACOVA_04904
Regulated genes 2
Built upon 26 sites [see more]
Predicted regulatory interactions in Bacteroides ovatus ATCC 8483
Locus tag Position Score Sequence
Position: -128
Score: 9.5
Sequence: CAAAAAATACGA-(9)-CAAATATTGCAC
Locus tag: BACOVA_04911
BACOVA_04911 -128 9.5 CAAAAAATACGA-(9)-CAAATATTGCAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: susC_Rgu-1
Ortholog function: TonB-dependent outer membrane transporter of rhamnogalacturonan oligosaccharides
Bacteroides ovatus ATCC 8483 BACOVA_04911 -128 9.5 CAAAAAATACGA-(9)-CAAATATTGCAC
Position: -267
Score: 9
Sequence: CAAAAAATACAC-(9)-CAATTAGTCCAC
Locus tag: BACOVA_05040
BACOVA_05040 -267 9 CAAAAAATACAC-(9)-CAATTAGTCCAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: pehX1
Ortholog function: Polygalacturonase (EC 3.2.1.15 )
Bacteroides cellulosilyticus DSM 14838 BACCELL_03143 -273 8.8 CAAAAAATCCAC-(9)-CAAATTGTGCAC
Bacteroides eggerthii DSM 20697 BACEGG_00876 -272 9.2 CAAAAAATACAC-(9)-CAATTAGTACAC
Bacteroides ovatus ATCC 8483 BACOVA_05040 -267 9 CAAAAAATACAC-(9)-CAATTAGTCCAC
Bacteroides stercoris ATCC 43183 BACSTE_03276 -205 8.4 CAAAAAATACAC-(9)-CAATTTGTACAC
Bacteroides thetaiotaomicron VPI-5482 BT4187 -265 9 CAAAAAATACAC-(9)-CAATAACTCCAC