Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Propagation of HTCS_Rgu-2 regulog to Bacteroides ovatus ATCC 8483

Reference regulog properties
Source regulog: HTCS_Rgu-2 - Bacteroidaceae
Regulator type: Transcription factor
Regulator family: [Other]
Regulation mode: activator
Biological process: Rhamnogalacturonides utilization
Effector:
Phylum: Bacteroidetes
Propagated regulon:
Target genome Bacteroides ovatus ATCC 8483
Orthologous TF(s) BACOVA_04993, BACOVA_05030
Regulated genes 6
Built upon 39 sites [see more]
Predicted regulatory interactions in Bacteroides ovatus ATCC 8483
Locus tag Position Score Sequence
Position: -235
Score: 7.2
Sequence: TGAATCAGAATACA-(6)-TGTACAGTAATTAA
Locus tag: BACOVA_02709
BACOVA_02709 -235 7.2 TGAATCAGAATACA-(6)-TGTACAGTAATTAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: BT4163
Ortholog function: Conserved hypothetical protein
Bacteroides ovatus ATCC 8483 BACOVA_02709 -235 7.2 TGAATCAGAATACA-(6)-TGTACAGTAATTAA
Bacteroides thetaiotaomicron VPI-5482 BT4163 -263 7.2 GGCGGTATTTTCCA-(6)-TGTACGATTCTTCA
Position: -83
Score: 8.5
Sequence: GATACAATATTCTA-(6)-TGTACATCTTTCTA
Locus tag: BACOVA_04950
BACOVA_04950 -83 8.5 GATACAATATTCTA-(6)-TGTACATCTTTCTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: bguA
Ortholog function: Beta-glucuronidase (EC 3.2.1.31)
Bacteroides dorei DSM 17855 BACDOR_00368 -94 9.3 TATACGAATTTCCA-(6)-TGTACTTCTTTCTA
Bacteroides ovatus ATCC 8483 BACOVA_04950 -141 8.2 TGGACAATATTTCA-(6)-TGTAGTTTTGTACA
-83 8.5 GATACAATATTCTA-(6)-TGTACATCTTTCTA
Bacteroides plebeius DSM 17135 BACPLE_00503 -96 8.5 TACACAATATTCCA-(6)-TGAAGAATTATCGA
Bacteroides thetaiotaomicron VPI-5482 BT4151 -111 8.5 GATACAATATTCTA-(6)-TGTACATCTTTCTA
Bacteroides vulgatus ATCC 8482 BVU_0181 -94 9.3 TATACGAATTTCCA-(6)-TGTACTTCTTTCTA
Position: -108
Score: 8.7
Sequence: TGTACAAAACTACA-(6)-TGAAATATTGTCCA
Locus tag: BACOVA_04951
BACOVA_04951 -108 8.7 TGTACAAAACTACA-(6)-TGAAATATTGTCCA
Supported by regulated orthologs from reference regulons
Ortholog gene name: BVU_0180
Ortholog function: Predicted arabinosidase, GH42 family
Bacteroides ovatus ATCC 8483 BACOVA_04951 -108 8.7 TGTACAAAACTACA-(6)-TGAAATATTGTCCA
Position: -89
Score: 8.7
Sequence: TGAACGAATCGCCA-(6)-TGGATAATATTCTA
Locus tag: BACOVA_04967
BACOVA_04967 -89 8.7 TGAACGAATCGCCA-(6)-TGGATAATATTCTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: BT4172
Ortholog function: Conserved hypothetical protein
Bacteroides dorei DSM 17855 BACDOR_00396 -108 8.9 TGAACGAATAAACA-(6)-TGAATGAATTTCTA
Bacteroides ovatus ATCC 8483 BACOVA_04967 -89 8.7 TGAACGAATCGCCA-(6)-TGGATAATATTCTA
Bacteroides plebeius DSM 17135 BACPLE_00251 -92 9.7 TATACAAATTTACA-(6)-TGTACAATACTCCA
Bacteroides thetaiotaomicron VPI-5482 BT4172 -123 9.6 TGAACAAATATCCA-(6)-TGAATGATATTCTA
Bacteroides vulgatus ATCC 8482 BVU_0159 -108 8.9 TGAACGAATAAACA-(6)-TGAATGAATTTCTA
Position: -93
Score: 8.3
Sequence: TGATGATTTCTACA-(6)-TGTACAATATTCTA
Locus tag: BACOVA_04974
BACOVA_04974 -93 8.3 TGATGATTTCTACA-(6)-TGTACAATATTCTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: BT4175
Ortholog function: Predicted beta-galactosidase, PL11 family
Bacteroides dorei DSM 17855 BACDOR_00407 -85 9.3 TGGACGAATTTCCA-(6)-TGTATCTTATTCTA
Bacteroides ovatus ATCC 8483 BACOVA_04974 -93 8.3 TGATGATTTCTACA-(6)-TGTACAATATTCTA
Bacteroides thetaiotaomicron VPI-5482 BT4175 -183 6.5 TGGAATATTGTCCA-(6)-TTTAAATTTGTCCA
Bacteroides vulgatus ATCC 8482 BVU_0152 -85 9.3 TGGACGAATTTCCA-(6)-TGTATCTTATTCTA
Position: -113
Score: 7
Sequence: TGGAAAAAATGACA-(6)-TGGATAATAATCCT
Locus tag: BACOVA_05029
BACOVA_05029 -113 7 TGGAAAAAATGACA-(6)-TGGATAATAATCCT
Supported by regulated orthologs from reference regulons
Ortholog gene name: BACOVA_05029
Ortholog function: Hypothetical protein
Bacteroides ovatus ATCC 8483 BACOVA_05029 -113 7 TGGAAAAAATGACA-(6)-TGGATAATAATCCT