Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Propagation of HTCS_Pga regulog to Bacteroides ovatus ATCC 8483

Reference regulog properties
Source regulog: HTCS_Pga - Bacteroidaceae
Regulator type: Transcription factor
Regulator family: [Other]
Regulation mode: activator
Biological process: Pectic galactan utilization
Effector: Pectic galactan
Phylum: Bacteroidetes
Propagated regulon:
Target genome Bacteroides ovatus ATCC 8483
Orthologous TF(s) BACOVA_05495
Regulated genes 1
Built upon 3 sites [see more]
Predicted regulatory interactions in Bacteroides ovatus ATCC 8483
Locus tag Position Score Sequence
Position: -99
Score: 11.9
Sequence: TTCGTCCTATTTTT-(7)-TATGTCCAATCTGT
Locus tag: BACOVA_05493
BACOVA_05493 -99 11.9 TTCGTCCTATTTTT-(7)-TATGTCCAATCTGT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ganC
Ortholog function: Predicted endo-1,4-beta-galactosidase (EC 3.2.1.89)
Bacteroides cellulosilyticus DSM 14838 BACCELL_05455 -100 10.7 CATGTCCTTTTTGT-(7)-TATGTCCGATATCT
Bacteroides ovatus ATCC 8483 BACOVA_05493 -99 11.9 TTCGTCCTATTTTT-(7)-TATGTCCAATCTGT