Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Propagation of HcpR regulog to Parabacteroides johnsonii DSM 18315

Reference regulog properties
Source regulog: HcpR - Bacteroidaceae
Regulator type: Transcription factor
Regulator family: CRP
Regulation mode: activator
Biological process: Nitrosative stress response
Effector: Nitric oxide
Phylum: Bacteroidetes
Propagated regulon:
Target genome Parabacteroides johnsonii DSM 18315
Orthologous TF(s) PRABACTJOHN_03156
Regulated genes 2
Built upon 18 sites [see more]
Predicted regulatory interactions in Parabacteroides johnsonii DSM 18315
Locus tag Position Score Sequence
Position: -64
Score: 5.9
Sequence: TTGTACCAAATGTTACAA
Locus tag: PRABACTJOHN_03156
PRABACTJOHN_03156 -64 5.9 TTGTACCAAATGTTACAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: hcpR
Ortholog function: Hcp transcriptional regulator HcpR, Crp family
Bacteroides cellulosilyticus DSM 14838 BACCELL_02846 -43 5.7 TTGTCACGTATGTTACAC
Bacteroides coprophilus DSM 18228 BACCOPRO_00665 -45 5.3 CTGTAACTTATGTGACAC
Bacteroides dorei DSM 17855 BACDOR_04542 -49 6.1 TTGTACCATATGTTACAG
Bacteroides plebeius DSM 17135 BACPLE_00934 -45 5.5 CTGTCACCTATGTGACAC
Bacteroides uniformis ATCC 8492 BACUNI_04426 -44 5.6 CTGTCACGAATGTTACAT
Bacteroides vulgatus ATCC 8482 BVU_2982 -49 6.1 TTGTACCATATGTTACAG
Position: -96
Score: 5.9
Sequence: TTGTAACATTTGGTACAA
Locus tag: PRABACTJOHN_03157
PRABACTJOHN_03157 -96 5.9 TTGTAACATTTGGTACAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: hcp
Ortholog function: Hydroxylamine reductase (EC 1.7.-.-)
Bacteroides cellulosilyticus DSM 14838 BACCELL_02847 -292 5.7 GTGTAACATACGTGACAA
Bacteroides coprophilus DSM 18228 BACCOPRO_00666 -87 5.3 GTGTCACATAAGTTACAG
Bacteroides dorei DSM 17855 BACDOR_04541 -35 6.1 CTGTAACATATGGTACAA
Bacteroides fragilis NCTC 9343 BF2204 -88 6 TTGTAACATTGGTTACAG
Bacteroides ovatus ATCC 8483 BACOVA_02390 -91 6 TTGTAACATTGGTTACAG
Bacteroides plebeius DSM 17135 BACPLE_00933 -87 5.5 GTGTCACATAGGTGACAG
Bacteroides thetaiotaomicron VPI-5482 BT_0687 -91 5.9 ATGTAACATTGGTTACAA
Bacteroides uniformis ATCC 8492 BACUNI_04425 -145 5.6 ATGTAACATTCGTGACAG
Bacteroides vulgatus ATCC 8482 BVU_2981 -71 6.1 CTGTAACATATGGTACAA