Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Propagation of CodY regulog to Staphylococcus aureus subsp. aureus str. Newman

Reference regulog properties
Source regulog: CodY - Staphylococcaceae
Regulator type: Transcription factor
Regulator family: CodY
Regulation mode: repressor
Biological process: Amino acid metabolism
Effector: Branched-chain amino acids
Phylum: Firmicutes
Propagated regulon:
Target genome Staphylococcus aureus subsp. aureus str. Newman
Orthologous TF(s) NWMN_1165
Regulated genes 73
Built upon 516 sites [see more]
Predicted regulatory interactions in Staphylococcus aureus subsp. aureus str. Newman
Locus tag Position Score Sequence
Position: -314
Score: 4.6
Sequence: AGTAATCAGAAAATT
Locus tag: NWMN_0011
NWMN_0011 -314 4.6 AGTAATCAGAAAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: metX
Ortholog function: homoserine-o-acetyltransferase
Staphylococcus aureus subsp. aureus N315 SA0011 -293 4.6 AGTAATCAGAAAATT
Staphylococcus capitis SK14 STACA0001_1363 -236 4.6 ATTAATTAGAAAATT
-227 4.6 AAAATTCAGACTATT
Staphylococcus epidermidis ATCC 12228 SE0011 -233 4.8 AATAATTAGAAAATT
-224 4.5 AAAATTTAGACTATT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP0012 -230 4.8 AATAATTAGAAAATT
-221 4 AAAATTATGATATTT
Position: -102
Score: 4.7
Sequence: AAATATCTGAATATT
Locus tag: NWMN_0071
NWMN_0071 -102 4.7 AAATATCTGAATATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: butA
Ortholog function: acetoin reductase
Staphylococcus aureus subsp. aureus N315 SA0122 -102 4.7 AAATATCTGAATATT
Staphylococcus carnosus subsp. carnosus TM300 Sca_0065 -68 4.6 ATTATTCAGAAAATA
Position: -102
Score: 4.2
Sequence: AAATTTTATATAATT
Locus tag: NWMN_0077
NWMN_0077 -102 4.2 AAATTTTATATAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: sodM
Ortholog function: superoxide dismutase SodM
Staphylococcus aureus subsp. aureus N315 SA0128 -102 4.2 AAATTTTATATAATT
-41 4 AATTATTATAAAAGT
Position: -205
Score: 4.1
Sequence: ATTTTTTTAAATAAA
Position: -32
Score: 4.1
Sequence: ATTTTAATGAAAATT
Locus tag: NWMN_0095
NWMN_0095 -205 4.1 ATTTTTTTAAATAAA
-32 4.1 ATTTTAATGAAAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: capA
Ortholog function: capsular polysaccharide synthesis enzyme Cap5A
Staphylococcus aureus subsp. aureus N315 SA0144 -32 4.1 ATTTTAATGAAAATT
Position: 3
Score: 4.2
Sequence: AGAATTTTAAATATT
Locus tag: NWMN_0103
NWMN_0103 3 4.2 AGAATTTTAAATATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: capI
Ortholog function: capsular polysaccharide synthesis enzyme Cap5I
Staphylococcus aureus subsp. aureus N315 SA0152 -32 4.1 ATTTTAATGAAAATT
Position: -88
Score: 4.8
Sequence: AATATTTAAAAAAAT
Locus tag: NWMN_0115
NWMN_0115 -88 4.8 AATATTTAAAAAAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: SA0165
Ortholog function: hypothetical protein
Staphylococcus aureus subsp. aureus N315 SA0165 -97 4.2 TTTTATCTAAATATT
-88 4.8 AATATTTAAAAAAAT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP0460 -99 4.8 ATTTATCAGAAAATT
Position: -117
Score: 5.2
Sequence: AATTTTCAAAAAATT
Locus tag: NWMN_0130
NWMN_0130 -117 5.2 AATTTTCAAAAAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: brnQ1
Ortholog function: branched-chain amino acid transport system
Staphylococcus aureus subsp. aureus N315 SA0180 -117 5.2 AATTTTCAAAAAATT
Staphylococcus capitis SK14 STACA0001_0024 -81 4.7 TTTTTTCTGAAAATT
Staphylococcus epidermidis ATCC 12228 SE0217 -173 4.4 AATATTAAAAATTTT
Staphylococcus haemolyticus JCSC1435 SH0145 -81 4.5 AATTTATTGAATATT
Macrococcus caseolyticus JCSC5402 MCCL_0050 -86 4.5 AATTTTTTAATTAAT
-77 4.8 ATTAATCAGAAAATT
Position: -55
Score: 4.5
Sequence: ATTTTTCAGATTTTT
Position: -46
Score: 4.5
Sequence: ATTTTTTAAATTATT
Locus tag: NWMN_0248
NWMN_0248 -55 4.5 ATTTTTCAGATTTTT
-46 4.5 ATTTTTTAAATTATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: brnQ2
Ortholog function: branched-chain amino acid transport system
Staphylococcus aureus subsp. aureus N315 SA0294 -55 4.5 ATTTTTCAGATTTTT
-46 4.5 ATTTTTTAAATTATT
Staphylococcus carnosus subsp. carnosus TM300 Sca_0418 -53 5 AATATTCAGAAATTT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP2299 -112 4.3 AATACTTTAAATATT
-103 4.1 AATATTATAAATTAT
-94 4.5 AATTATCTGACATTT
Position: -121
Score: 4.5
Sequence: AATATTTTAAAAAGT
Locus tag: NWMN_0373
NWMN_0373 -121 4.5 AATATTTTAAAAAGT
Supported by regulated orthologs from reference regulons
Ortholog gene name: SA0367
Ortholog function: putative NADPH-flavin oxidoreductase
Staphylococcus aureus subsp. aureus N315 SA0367 -121 4.2 AATATTTTTAAAAGT
Staphylococcus capitis SK14 STACA0001_1449 -145 4.8 AAATATCTGAAAATT
Staphylococcus epidermidis ATCC 12228 SE2355 -114 5.1 AATTATCTGAAAATT
Staphylococcus carnosus subsp. carnosus TM300 Sca_0041 -140 4.3 AATATTTATATTATT
Staphylococcus haemolyticus JCSC1435 SH2590 -144 4.8 AAATATCTGAAAATT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP2331 -193 4.3 AATAATTTAACTATT
Position: -29
Score: 4.4
Sequence: TATATTCAAAAATTT
Locus tag: NWMN_0374
NWMN_0374 -29 4.4 TATATTCAAAAATTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: tcyP
Ortholog function: L-cystine uptake protein tcyP
Staphylococcus aureus subsp. aureus N315 SA0368 -72 4.3 AATATTTTAAAATTA
-29 4.4 TATATTCAAAAATTT
Staphylococcus capitis SK14 STACA0001_1450 -133 5.1 ATTATTCAGAAAATT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP2329 -138 4.6 AATTATCAGAAAATA
Position: -169
Score: 4.4
Sequence: CTTTTTTAGAATATT
Locus tag: NWMN_0435
NWMN_0435 -169 4.4 CTTTTTTAGAATATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: gltC
Ortholog function: transcription activator of glutamate synthase operon
Staphylococcus aureus subsp. aureus N315 SA0429 -169 4.4 CTTTTTTAGAATATT
-160 4.3 AATATTCTGATATTA
Staphylococcus capitis SK14 STACA0001_1493 -179 5 AATTTTCTGACAATT
-41 4.6 AAATTTTAGAATTTT
Staphylococcus epidermidis ATCC 12228 SE2313 -171 5 AATTTTCTGACAATT
Staphylococcus carnosus subsp. carnosus TM300 Sca_0104 -113 4.7 AATTTTCAGATTTTT
-39 4.5 ATTATTCTAATTATT
Staphylococcus haemolyticus JCSC1435 SH2541 -138 5.4 AATTTTCAGAAAATT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP2285 -118 5 AAAATTCTGAAAATT
Position: -26
Score: 4.4
Sequence: AATATTCTAAAAAAG
Locus tag: NWMN_0436
NWMN_0436 -26 4.4 AATATTCTAAAAAAG
Supported by regulated orthologs from reference regulons
Ortholog gene name: gltB
Ortholog function: glutamate synthase large subunit
Staphylococcus aureus subsp. aureus N315 SA0430 -35 4.3 TAATATCAGAATATT
-26 4.4 AATATTCTAAAAAAG
Staphylococcus capitis SK14 STACA0001_1494 -174 4.6 AAAATTCTAAAATTT
-36 5 AATTGTCAGAAAATT
Staphylococcus epidermidis ATCC 12228 SE2312 -35 5 AATTGTCAGAAAATT
Staphylococcus carnosus subsp. carnosus TM300 Sca_0105 -117 4.5 AATAATTAGAATAAT
-43 4.7 AAAAATCTGAAAATT
Staphylococcus haemolyticus JCSC1435 SH2540 -34 5.4 AATTTTCTGAAAATT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP2284 -34 5 AATTTTCAGAATTTT
Position: -92
Score: 5.2
Sequence: AATTTTTAGAAAATT
Locus tag: NWMN_0516
NWMN_0516 -92 5.2 AATTTTTAGAAAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ilvE
Ortholog function: branched-chain amino acid aminotransferase
Staphylococcus aureus subsp. aureus N315 SA0512 -92 5.2 AATTTTTAGAAAATT
Staphylococcus capitis SK14 STACA0001_0476 -101 4.4 TTTATTTTGAATATT
-92 4.7 AATATTTAGAAAACT
Staphylococcus epidermidis ATCC 12228 SE0318 -99 4.1 TCTATTTTGAATATT
-90 5.2 AATATTTAGAAAATT
Staphylococcus carnosus subsp. carnosus TM300 Sca_0215 -101 4.5 ATTTTTTTAAATTTT
-92 4.8 AATTTTCTAAAAACT
Staphylococcus haemolyticus JCSC1435 SH2449 -91 5.2 AATTTTTAGAAAATT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP2163 -86 5.2 AATTTTTTGAAAATT
Macrococcus caseolyticus JCSC5402 MCCL_1855 -85 4.8 AATTTTCTAAAAACT
Position: -178
Score: 5
Sequence: AAAATTCAGAATATT
Locus tag: NWMN_0615
NWMN_0615 -178 5 AAAATTCAGAATATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: SA0601
Ortholog function: hypothetical protein
Staphylococcus aureus subsp. aureus N315 SA0601 -400 5 AAAATTCAGAATATT
-391 4.1 AATATTTTTAATTAT
Staphylococcus capitis SK14 STACA0001_0382 -211 5 AAAATTCAGAATATT
Staphylococcus epidermidis ATCC 12228 SE0420 -206 5 AAAATTCAGAATATT
-197 4.1 AATATTTAAATTTAT
Staphylococcus carnosus subsp. carnosus TM300 Sca_0294 -120 4.8 AATTTTCAGAATTAT
Staphylococcus haemolyticus JCSC1435 SH2248 -172 5 AAAATTCAGAAAATT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP2074 -166 4.8 AAATTTCAGAATTTT
Position: -195
Score: 4.5
Sequence: ATATTTTTGAAAAAT
Locus tag: NWMN_0640
NWMN_0640 -195 4.5 ATATTTTTGAAAAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: SA0626
Ortholog function: hypothetical protein
Staphylococcus aureus subsp. aureus N315 SA0626 -195 4.5 ATATTTTTGAAAAAT
Staphylococcus capitis SK14 STACA0001_0358 -200 4.6 ATTAATTAGAAAATT
-142 4.3 AATTTTAAGTAAATT
-98 4.2 ATAATTTTGAAAATA
Staphylococcus haemolyticus JCSC1435 SH2222 -200 4.1 TTTATTTAGAATTTT
-191 4.6 AATTTTCAGATAATA
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP2051 -190 5.1 AATTTTCAGAAAAAT
Position: -112
Score: 4.6
Sequence: AATATTCTCAATATT
Locus tag: NWMN_0696
NWMN_0696 -112 4.6 AATATTCTCAATATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: tppB
Ortholog function: di-tripepride ABC transporter
Staphylococcus aureus subsp. aureus N315 SA0682 -112 4.6 AATATTCTCAATATT
-103 4.1 AATATTTTTATTTTT
Staphylococcus capitis SK14 STACA0001_0301 -124 4.3 AATTGACTGAATATT
-115 4.5 AATATTCATATTATT
-98 4.8 TATTTTTTGAAAATT
Staphylococcus epidermidis ATCC 12228 SE0509 -107 4 CTTTTTTTAAATTTT
-98 5.2 AATTTTTTGAAAATT
Staphylococcus carnosus subsp. carnosus TM300 Sca_0374 -114 5.3 AATATTCTGAAAATT
-88 4.5 TATTTTAAGAAAATT
Staphylococcus haemolyticus JCSC1435 SH2166 -102 5 AAATTTCTAAAAATT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP1991 -118 4.1 AAATAACAGAATATT
-109 4.6 AATATTCTCAATATT
Macrococcus caseolyticus JCSC5402 MCCL_0478 -117 4.6 AACTTTTTGAAAATT
-36 5.3 AATTTTCAGAATATT
Position: -32
Score: 4.6
Sequence: AATATTCAGATAACT
Locus tag: NWMN_0832
NWMN_0832 -32 4.6 AATATTCAGATAACT
Supported by regulated orthologs from reference regulons
Ortholog gene name: argG
Ortholog function: argininosuccinate synthase
Staphylococcus aureus subsp. aureus N315 SA0822 -32 4.6 AATATTCAGATAACT
Staphylococcus capitis SK14 STACA0001_0165 -33 5 AAAATTCTGAAAATT
Staphylococcus epidermidis ATCC 12228 SE0657 -180 4.5 AATTTACAGAAATTT
-171 4.3 AAATTTTAAAATATA
Staphylococcus carnosus subsp. carnosus TM300 Sca_0569 -33 4.5 AAAATTCTAACTATT
Staphylococcus haemolyticus JCSC1435 SH1989 -31 5.1 AATTTTCAGAAAAAT
Position: -66
Score: 4.7
Sequence: AGATTTCAGAAAATT
Locus tag: NWMN_0856
NWMN_0856 -66 4.7 AGATTTCAGAAAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: oppB
Ortholog function: oligopeptide ABC transporter permease protein OppB
Staphylococcus aureus subsp. aureus N315 SA0845 -66 4.7 AGATTTCAGAAAATT
Staphylococcus capitis SK14 STACA0001_0146 -36 4.2 AATATACATAATATT
-27 4.6 AATATTCTGAAAAAA
Staphylococcus epidermidis ATCC 12228 SE0680 -63 4.9 ATATTTCTGAAAATT
Staphylococcus carnosus subsp. carnosus TM300 Sca_0588 -113 5.2 AATATTCTAAAAATT
-65 4.2 AATATTAAAATATTT
-56 4.9 ATATTTCTGAAAATT
Staphylococcus haemolyticus JCSC1435 SH1970 -116 4.7 AATTTTGTGAAAATT
-60 4.9 ATATTTCTGAAAATT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP1794 -56 4.8 ATATTTCTGAATATT
Macrococcus caseolyticus JCSC5402 MCCL_0605 -186 4.8 AATTTTTAAAAAAAT
-132 4.8 AATCTTCTGAAAATT
Position: -84
Score: 4.7
Sequence: AATATTCTAAAAATA
Locus tag: NWMN_0861
NWMN_0861 -84 4.7 AATATTCTAAAAATA
Supported by regulated orthologs from reference regulons
Ortholog gene name: appA
Ortholog function: oligopeptide transport system oligopeptide-binding protein AppA
Staphylococcus aureus subsp. aureus N315 SA0850 -93 4.1 AAATAACTGAATATT
-84 4.7 AATATTCTAAAAATA
Staphylococcus carnosus subsp. carnosus TM300 Sca_0936 -65 4.6 AATAGTCAGACAATT
Position: -18
Score: 5.1
Sequence: AATATTCTGAAAAAT
Locus tag: NWMN_0883
NWMN_0883 -18 5.1 AATATTCTGAAAAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: SA0871
Ortholog function: sodium-alanine symporter homolog
Staphylococcus aureus subsp. aureus N315 SA0871 -150 4.3 ATTTATAAGAATATT
-141 5.1 AATATTCTGAAAAAT
Staphylococcus aureus subsp. aureus N315 SA0871 -150 4.3 ATTTATAAGAATATT
-141 5.1 AATATTCTGAAAAAT
Macrococcus caseolyticus JCSC5402 MCCL_0082 -101 4.7 AATATTCAGAATTAT
Macrococcus caseolyticus JCSC5402 MCCL_0082 -101 4.7 AATATTCAGAATTAT
Position: -147
Score: 4.9
Sequence: AATATTCTGACTATT
Locus tag: NWMN_0895
NWMN_0895 -147 4.9 AATATTCTGACTATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: comK
Ortholog function: competence transcription factor
Staphylococcus aureus subsp. aureus N315 SA0882 -147 4.9 AATATTCTGACTATT
Staphylococcus capitis SK14 STACA0001_0106 -151 4.7 AATATTCTGACATTT
Staphylococcus epidermidis ATCC 12228 SE0731 -147 4.7 AATATTCTGACATTT
Staphylococcus carnosus subsp. carnosus TM300 Sca_0642 -145 4.6 AATATTCTGACTTTT
-136 4.1 ACTTTTTAAAAAATA
Staphylococcus haemolyticus JCSC1435 SH1926 -148 4.6 AATATTCTGACTTTT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP1755 -186 4.6 AATATTCAGACTTTT
-92 4.5 AAATTTATAAAAATT
Macrococcus caseolyticus JCSC5402 MCCL_1546 -195 4.8 ATAATTCTGAAAATT
-186 4.4 AAAATTTAAATTATT
-86 4.7 AAATTTCTTAAAATT
Position: -77
Score: 4.9
Sequence: AATAGTCAGAATATT
Locus tag: NWMN_0896
NWMN_0896 -77 4.9 AATAGTCAGAATATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: SA0883
Ortholog function: hypothetical protein
Staphylococcus aureus subsp. aureus N315 SA0883 -77 4.9 AATAGTCAGAATATT
Staphylococcus capitis SK14 STACA0001_0107 -83 4.7 AAATGTCAGAATATT
Staphylococcus epidermidis ATCC 12228 SE0729 -82 4.7 AAATGTCAGAATATT
Staphylococcus carnosus subsp. carnosus TM300 Sca_0643 -178 4.2 AATTATAAAAATAAT
-91 4.1 TATTTTTTAAAAAGT
-82 4.6 AAAAGTCAGAATATT
Staphylococcus haemolyticus JCSC1435 SH1925 -80 4.6 AAAAGTCAGAATATT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP1756 -174 4.5 AATTTTTATAAATTT
-80 4.6 AAAAGTCTGAATATT
Position: -50
Score: 4.2
Sequence: TAATTTCTAAATTTT
Position: -41
Score: 4.4
Sequence: AATTTTTAGACAATA
Position: 19
Score: 4.1
Sequence: CTAATTCTAAATATT
Locus tag: NWMN_0919
NWMN_0919 -50 4.2 TAATTTCTAAATTTT
-41 4.4 AATTTTTAGACAATA
19 4.1 CTAATTCTAAATATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: patA
Ortholog function: putative aminotransferase A
Staphylococcus aureus subsp. aureus N315 SA0902 -50 4.2 TAATTTCTAAATTTT
-41 4.4 AATTTTTAGACAATA
Staphylococcus capitis SK14 STACA0001_2317 -58 4.1 ACTATTTTAACAATT
Staphylococcus epidermidis ATCC 12228 SE0747 -59 4.1 ACTATTTAAACAATT
Staphylococcus carnosus subsp. carnosus TM300 Sca_0656 -108 4.2 TTTATTCTAAAATTT
Staphylococcus haemolyticus JCSC1435 SH1916 -65 4.9 ATTATTCTAAAAATT
Macrococcus caseolyticus JCSC5402 MCCL_1585 -86 4.3 AATGTTCTAATAATT
Position: -91
Score: 4.4
Sequence: TAAATTTTGAAAATT
Position: -23
Score: 4.6
Sequence: ATTAGTTAGAAAATT
Locus tag: NWMN_0979
NWMN_0979 -91 4.4 TAAATTTTGAAAATT
-23 4.6 ATTAGTTAGAAAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: pycA
Ortholog function: pyruvate carboxylase
Staphylococcus aureus subsp. aureus N315 SA0963 -41 4.6 ATTAGTTAGAAAATT
Staphylococcus capitis SK14 STACA0001_2249 -42 4.6 ATTAGTTAGAAAATT
-33 4.4 AAAATTCAAAAAATA
Staphylococcus epidermidis ATCC 12228 SE0813 -40 4.1 TATTATCTAATTATT
-31 4.9 ATTATTTAGAAAATT
Staphylococcus carnosus subsp. carnosus TM300 Sca_0740 -34 4.6 AAAATTCAAATAATT
Staphylococcus haemolyticus JCSC1435 SH1838 -41 4.5 ATTAGTTAGAATATT
-32 4 AATATTCAAACTTTA
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP1675 -38 4.7 ACTTTTTAGAAAATT
-29 4.1 AAAATTCAAAATTTA
Position: -187
Score: 4.4
Sequence: ATTTATCAGATTATT
Position: -178
Score: 4.2
Sequence: ATTATTTTTAAAAAT
Locus tag: NWMN_1216
NWMN_1216 -187 4.4 ATTTATCAGATTATT
-178 4.2 ATTATTTTTAAAAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: glnR
Ortholog function: HTH-type transcriptional regulator GlnR
Staphylococcus aureus subsp. aureus N315 SA1149 -187 4.4 ATTTATCAGATTATT
-178 4.2 ATTATTTTTAAAAAT
Staphylococcus capitis SK14 STACA0001_1553 -202 4.3 TTTTGTCAGAAAATT
-191 4.1 AATTATAAAATTATT
-150 4.2 ATTAATTAAAAATTT
Staphylococcus epidermidis ATCC 12228 SE0986 -194 4.8 AAATGTCTGAAAATT
-185 4.7 AAAATTTTAAAAATT
Staphylococcus carnosus subsp. carnosus TM300 Sca_0958 -157 4.8 AATTTACAGAAAATT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP1452 -179 4.2 ATTTTTTTGAATAAA
-157 4.9 AATTTTCTAATAATT
-56 4.4 ATTAATCTGATTATT
Position: -75
Score: 4.6
Sequence: AATATTCAAAATATA
Position: -23
Score: 4.7
Sequence: AATTTTCTGATTTTT
Locus tag: NWMN_1239
NWMN_1239 -75 4.6 AATATTCAAAATATA
-23 4.7 AATTTTCTGATTTTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: thrA
Ortholog function: aspartokinase III
Staphylococcus aureus subsp. aureus N315 SA1163 -87 4.6 AATATTCAAAATATA
-35 4.7 AATTTTCTGATTTTT
Staphylococcus capitis SK14 STACA0001_1570 -33 4.7 AATTTTCTGATTTTT
Staphylococcus epidermidis ATCC 12228 SE1008 -33 4.7 AATTTTCTGATTTTT
Staphylococcus carnosus subsp. carnosus TM300 Sca_0969 -97 4.4 AAAGTTCAAAAAATT
-79 4.2 AATATGTTGAAATTT
Staphylococcus haemolyticus JCSC1435 SH1580 -35 4.7 AATTTTCTGATTTTT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP1439 -35 4.7 AATTTTCTGATTTTT
Position: -170
Score: 4.7
Sequence: AAAAATCAGAAAATT
Position: -118
Score: 4.6
Sequence: TATATTTTGAATATT
Locus tag: NWMN_1240
NWMN_1240 -170 4.7 AAAAATCAGAAAATT
-118 4.6 TATATTTTGAATATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: hom
Ortholog function: homoserine dehydrogenase
Staphylococcus aureus subsp. aureus N315 SA1164 -170 4.7 AAAAATCAGAAAATT
-118 4.6 TATATTTTGAATATT
Staphylococcus capitis SK14 STACA0001_1571 -170 4.7 AAAAATCAGAAAATT
-91 4.3 AAAATTAAGAATAAT
Staphylococcus epidermidis ATCC 12228 SE1009 -170 4.7 AAAAATCAGAAAATT
Staphylococcus carnosus subsp. carnosus TM300 Sca_0970 -127 4.2 AAATTTCAACATATT
-109 4.4 AATTTTTTGAACTTT
Staphylococcus haemolyticus JCSC1435 SH1579 -178 4.7 AAAAATCAGAAAATT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP1438 -168 4.7 AAAAATCAGAAAATT
Position: -110
Score: 4.7
Sequence: AAAAATCAGAAAATT
Locus tag: NWMN_1245
NWMN_1245 -110 4.7 AAAAATCAGAAAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: rocC
Ortholog function: amino acid permease
Staphylococcus aureus subsp. aureus N315 SA1169 -110 4.7 AAAAATCAGAAAATT
-101 4.1 AAAATTTTAATTTTT
Staphylococcus capitis SK14 STACA0001_1576 -112 5.1 AAATTTCAGAAAATT
-102 4.7 AAATTTTTAAATATT
Staphylococcus epidermidis ATCC 12228 SE1015 -112 4.6 AAATATCAGAAAAAT
-103 4.1 AAAAATTTAACAATT
Staphylococcus carnosus subsp. carnosus TM300 Sca_0975 -121 4.3 TTTTTTCAGAATTTT
-112 4.7 AATTTTTTAAATTTT
Staphylococcus haemolyticus JCSC1435 SH1574 -114 5.1 AAATTTCAGAAAATT
-105 4.4 AAAATTTAAAATTTT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP1433 -111 4.4 AATATTTAAACATTT
Macrococcus caseolyticus JCSC5402 MCCL_0990 -56 4.4 AATTTTCTTAATTAT
Position: -111
Score: 4.1
Sequence: AAAAATTAAAATTTT
Position: -102
Score: 4.7
Sequence: AATTTTCTGATTTTT
Locus tag: NWMN_1246
NWMN_1246 -111 4.1 AAAAATTAAAATTTT
-102 4.7 AATTTTCTGATTTTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: katA
Ortholog function: catalase
Staphylococcus aureus subsp. aureus N315 SA1170 -111 4.1 AAAAATTAAAATTTT
-102 4.7 AATTTTCTGATTTTT
Staphylococcus capitis SK14 STACA0001_1577 -131 4.7 AATATTTAAAAATTT
-121 5.1 AATTTTCTGAAATTT
Staphylococcus epidermidis ATCC 12228 SE1016 -142 4.1 AATTGTTAAATTTTT
-133 4.6 ATTTTTCTGATATTT
Staphylococcus carnosus subsp. carnosus TM300 Sca_2336 -28 4.1 ATTATTCTAAATAAG
Staphylococcus haemolyticus JCSC1435 SH1573 -123 4.4 AAAATTTTAAATTTT
-114 5.1 AATTTTCTGAAATTT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP1432 -129 4.4 AAATGTTTAAATATT
Position: -34
Score: 5.1
Sequence: ATTATTCTGAAAATT
Locus tag: NWMN_1277
NWMN_1277 -34 5.1 ATTATTCTGAAAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: tyrA
Ortholog function: prephenate dehydrogenase
Staphylococcus aureus subsp. aureus N315 SA1197 -34 5.1 ATTATTCTGAAAATT
Staphylococcus capitis SK14 STACA0001_1611 -35 4.8 ACTATTCTGAAAATT
Staphylococcus epidermidis ATCC 12228 SE1047 -251 4.4 AATTATCTGATTTTT
-242 4.6 ATTTTTCTAATTATT
-35 4.4 GTTATTCTGAAAATT
Staphylococcus haemolyticus JCSC1435 SH1544 -35 4.8 CATATTCTGAAAATT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP1387 -36 4.8 ACTATTCTGAAAATT
Position: -96
Score: 4.5
Sequence: AATATTTCGAATATT
Locus tag: NWMN_1279
NWMN_1279 -96 4.5 AATATTTCGAATATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: trpE
Ortholog function: anthranilate synthase component I
Staphylococcus aureus subsp. aureus N315 SA1199 -439 4.5 AATAATTAGAATTTT
Staphylococcus capitis SK14 STACA0001_1613 -438 4.6 AATAATTAGAAAAAT
-429 4.4 AAAAATCAGATAATT
Staphylococcus epidermidis ATCC 12228 SE1048 -431 4.6 AATAATTAGAAAAAT
-422 4.4 AAAAATCAGATAATT
Staphylococcus carnosus subsp. carnosus TM300 Sca_1012 -464 4.3 CATTATTAAAAAATT
Staphylococcus haemolyticus JCSC1435 SH1542 -453 4.3 AAATATCAAACAATT
Position: -342
Score: 4.4
Sequence: AATTTTCAGGTTATT
Position: -324
Score: 4
Sequence: AAAAATCTAAATTAT
Locus tag: NWMN_1304
NWMN_1304 -342 4.4 AATTTTCAGGTTATT
-324 4 AAAAATCTAAATTAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: lysC
Ortholog function: aspartokinase II
Staphylococcus carnosus subsp. carnosus TM300 Sca_1037 -340 4.3 AAATTTCTAAAAATC
Staphylococcus haemolyticus JCSC1435 SH1518 -344 4.1 ATTTTTCAGTCTATT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP1357 -350 4.5 ATTTTTCAGTAAATT
-341 4.3 TAAATTTAAAAAATT
Position: -45
Score: 5.2
Sequence: AATATTCTAAAAATT
Locus tag: NWMN_1305
NWMN_1305 -45 5.2 AATATTCTAAAAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: asd
Ortholog function: aspartate semialdehyde dehydrogenase
Staphylococcus aureus subsp. aureus N315 SA1226 -45 5.2 AATATTCTAAAAATT
Staphylococcus capitis SK14 STACA0001_1640 -44 5 AATTTTCTTAAAATT
Staphylococcus epidermidis ATCC 12228 SE1074 -46 5.2 AATTTTCTAAAAATT
Staphylococcus carnosus subsp. carnosus TM300 Sca_1038 -340 4.3 AAATTTCTAAAAATC
Staphylococcus haemolyticus JCSC1435 SH1517 -42 4.8 AATTTTTTTAAAATT
-33 4.3 AAAATTCAAACAAAT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP1356 -350 4.5 ATTTTTCAGTAAATT
-341 4.3 TAAATTTAAAAAATT
Position: -64
Score: 4.5
Sequence: AATATTTTAAATATA
Locus tag: NWMN_1348
NWMN_1348 -64 4.5 AATATTTTAAATATA
Supported by regulated orthologs from reference regulons
Ortholog gene name: tcdB
Ortholog function: threonine dehydratase
Staphylococcus aureus subsp. aureus N315 SA1271 -64 4.5 AATATTTTAAATATA
Position: -150
Score: 4.6
Sequence: AATATTAAGATAATT
Position: -141
Score: 4.2
Sequence: ATAATTCTGACATTT
Locus tag: NWMN_1377
NWMN_1377 -150 4.6 AATATTAAGATAATT
-141 4.2 ATAATTCTGACATTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: aroC
Ortholog function: chorismate synthase
Staphylococcus aureus subsp. aureus N315 SA1299 -150 4.6 AATATTAAGATAATT
-141 4.2 ATAATTCTGACATTT
Staphylococcus epidermidis ATCC 12228 SE1155 -138 4 TCTTTTTTAAATATT
Staphylococcus haemolyticus JCSC1435 SH1446 -124 4.7 AATTATTAAAATATT
-115 4.6 AATATTCTAATAAAT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP1278 -113 4.6 ATTTTTATGAATATT
Position: -106
Score: 4.8
Sequence: AATTATCAAAATATT
Locus tag: NWMN_1437
NWMN_1437 -106 4.8 AATTATCAAAATATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: SA1363
Ortholog function: Lipoate-protein ligase A
Staphylococcus aureus subsp. aureus N315 SA1363 -106 4.8 AATTATCAAAATATT
Staphylococcus capitis SK14 STACA0001_1770 -109 4.6 ATTTATCAAAATATT
Staphylococcus epidermidis ATCC 12228 SE1217 -108 4.6 ATTTATCAAAATATT
Staphylococcus haemolyticus JCSC1435 SH1383 -100 4.3 ATTTATCAAAATTTT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP1222 -121 4.6 ATTTATCAAAATATT
Position: -66
Score: 4.8
Sequence: AATATTTTGATAATT
Locus tag: NWMN_1438
NWMN_1438 -66 4.8 AATATTTTGATAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: SA1364
Ortholog function: putative sulfurtransferase
Staphylococcus aureus subsp. aureus N315 SA1364 -66 4.8 AATATTTTGATAATT
Staphylococcus capitis SK14 STACA0001_1771 -66 4.6 AATATTTTGATAAAT
Staphylococcus epidermidis ATCC 12228 SE1218 -66 4.6 AATATTTTGATAAAT
Staphylococcus haemolyticus JCSC1435 SH1382 -66 4.3 AAAATTTTGATAAAT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP1221 -67 4.6 AATATTTTGATAAAT
Position: -225
Score: 4
Sequence: CATTTTTTAAATTAT
Position: -224
Score: 4
Sequence: ATTTTTTAAATTATA
Position: -140
Score: 4.1
Sequence: AAATGTTTAATTATT
Locus tag: NWMN_1456
NWMN_1456 -225 4 CATTTTTTAAATTAT
-224 4 ATTTTTTAAATTATA
-140 4.1 AAATGTTTAATTATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: sodA
Ortholog function: superoxide dismutase SodA
Staphylococcus aureus subsp. aureus N315 SA1382 -140 4.1 AAATGTTTAATTATT
Staphylococcus capitis SK14 STACA0001_1791 -219 4.3 TATTTTCAAAAAACT
-184 4.2 AATGGTCTGAAAAAT
Staphylococcus epidermidis ATCC 12228 SE1240 -101 4.4 AATAATTTAATAATT
Staphylococcus haemolyticus JCSC1435 SH1363 -248 4.3 AATTATTTAAAAATA
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP1203 -182 4.2 AATTTTTAAAATTGT
Position: -54
Score: 5.4
Sequence: AATTTTCAGAAAATT
Locus tag: NWMN_1616
NWMN_1616 -54 5.4 AATTTTCAGAAAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: SA1544
Ortholog function: putative phosphoserine transaminase
Staphylococcus aureus subsp. aureus N315 SA1544 -54 5.4 AATTTTCAGAAAATT
Staphylococcus capitis SK14 STACA0001_0615 -53 5.2 AATATTCAGAATATT
Staphylococcus epidermidis ATCC 12228 SE1400 -54 5 AATATTCAGAATTTT
Staphylococcus carnosus subsp. carnosus TM300 Sca_1329 -55 4.9 TATTTTCAGAATATT
Staphylococcus haemolyticus JCSC1435 SH1201 -55 5 AATTATCAGAATATT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP1040 -55 4.9 TATTTTCTGAAAATT
Position: -127
Score: 4.3
Sequence: ATTATATAGAAAATT
Position: -78
Score: 4.6
Sequence: AAAATTTTGAATAAT
Position: -69
Score: 4.1
Sequence: AATAATTAGAAATGT
Locus tag: NWMN_1626
NWMN_1626 -127 4.3 ATTATATAGAAAATT
-78 4.6 AAAATTTTGAATAAT
-69 4.1 AATAATTAGAAATGT
Supported by regulated orthologs from reference regulons
Ortholog gene name: acsA
Ortholog function: acetyl-CoA synthetase
Staphylococcus aureus subsp. aureus N315 SA1554 -78 4.6 AAAATTTTGAATAAT
-69 4.1 AATAATTAGAAATGT
Staphylococcus capitis SK14 STACA0001_0626 -78 4.3 AGATTTTTGAAAAAT
Staphylococcus carnosus subsp. carnosus TM300 Sca_1338 -96 4.2 AAAAATCAGAATTAT
-87 4.1 AATTATCATAATTAT
Staphylococcus haemolyticus JCSC1435 SH1189 -87 4.9 AATTATCTAAAAATT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP1030 -75 4.9 ATTATTTTGAAAATT
Macrococcus caseolyticus JCSC5402 MCCL_1409 -48 4.5 TATATTTTGAAAAAT
Position: -114
Score: 4.1
Sequence: ACATTTCTAATTATT
Position: -105
Score: 4.6
Sequence: ATTATTCAAAATTTT
Position: -56
Score: 4.3
Sequence: AATTTTCTATATAAT
Locus tag: NWMN_1627
NWMN_1627 -114 4.1 ACATTTCTAATTATT
-105 4.6 ATTATTCAAAATTTT
-56 4.3 AATTTTCTATATAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: acuA
Ortholog function: hypothetical protein
Staphylococcus aureus subsp. aureus N315 SA1555 -114 4.1 ACATTTCTAATTATT
-105 4.6 ATTATTCAAAATTTT
-56 4.3 AATTTTCTATATAAT
Staphylococcus capitis SK14 STACA0001_0627 -110 4.3 ATTTTTCAAAAATCT
Staphylococcus carnosus subsp. carnosus TM300 Sca_1339 -159 4.1 ATAATTATGATAATT
-150 4.2 ATAATTCTGATTTTT
Staphylococcus haemolyticus JCSC1435 SH1188 -92 4.9 AATTTTTAGATAATT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP1029 -119 4.9 AATTTTCAAAATAAT
Macrococcus caseolyticus JCSC5402 MCCL_1410 -39 4.5 ATTTTTCAAAATATA
Position: -35
Score: 4.3
Sequence: ATAATTATGAATATT
Locus tag: NWMN_1750
NWMN_1750 -35 4.3 ATAATTATGAATATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: artQ
Ortholog function: Arginine ABC transport system ArtQ
Staphylococcus aureus subsp. aureus N315 SA1675 -167 4.3 ATAATTATGAATATT
Staphylococcus capitis SK14 STACA0001_0720 6 4.2 AAAATTATTAAAATT
Staphylococcus carnosus subsp. carnosus TM300 Sca_1432 -83 5.1 AAATTTCAGAAAATT
-74 4 AAAATTTAAAAATTA
Staphylococcus haemolyticus JCSC1435 SH1104 -72 4 CTTTTTTAAAATTTT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP0937 -63 4.2 ATTATATTGAATATT
Macrococcus caseolyticus JCSC5402 MCCL_1584 -87 4.3 AATTATTAGAACATT
Position: -309
Score: 4.4
Sequence: AATTAACTGAATATT
Locus tag: NWMN_1873
NWMN_1873 -309 4.4 AATTAACTGAATATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: hlb
Ortholog function: truncated beta-hemolysin
Staphylococcus aureus subsp. aureus N315 SA1752 -315 4.4 AATTAACTGAATATT
Position: -261
Score: 4.6
Sequence: AAAATTCTTAAAATT
Position: 4
Score: 4.2
Sequence: ATTATTTTGATAATA
Locus tag: NWMN_1943
NWMN_1943 -261 4.6 AAAATTCTTAAAATT
4 4.2 ATTATTTTGATAATA
Supported by regulated orthologs from reference regulons
Ortholog gene name: agrB
Ortholog function: accessory gene regulator B
Staphylococcus aureus subsp. aureus N315 SA1842 -261 4.6 AAAATTCTTAAAATT
Staphylococcus haemolyticus JCSC1435 SH0996 -124 4.1 ATATGTTAAAATATT
Position: -37
Score: 4.6
Sequence: AATTGTCAGATTATT
Locus tag: NWMN_1950
NWMN_1950 -37 4.6 AATTGTCAGATTATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: nrgA
Ortholog function: ammonium transporter
Staphylococcus aureus subsp. aureus N315 SA1848 -38 4.6 AATTGTCAGATTATT
Position: -301
Score: 4.9
Sequence: AATTTTTAGACAATT
Locus tag: NWMN_1960
NWMN_1960 -301 4.9 AATTTTTAGACAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ilvD
Ortholog function: dihydroxy-acid dehydratase
Staphylococcus aureus subsp. aureus N315 SA1858 -301 4.9 AATTTTTAGACAATT
-53 4.5 ATATTTCAGAATTTT
Staphylococcus capitis SK14 STACA0001_0526 -327 4.9 AATTGTTAGAAAATT
Staphylococcus epidermidis ATCC 12228 SE1654 -330 5.2 AATTTTTAGAAAATT
-321 4.1 AAAATTCTAAATTTA
Staphylococcus carnosus subsp. carnosus TM300 Sca_1559 -316 4.8 AATTTTAAAAAAATT
-307 4.3 AAAATTCTAATAAAT
Staphylococcus haemolyticus JCSC1435 SH0980 -321 4.4 AGTTGTTAGAAAATT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP0825 -323 4.2 AATTGACAGAAAAAT
-266 4 ATTTATCAAATTTTT
-258 4.7 AATTTTTAGATATTT
-249 4.1 ATATTTCAAACAAAT
Macrococcus caseolyticus JCSC5402 MCCL_0860 -266 5.2 AATTTTTAGAAAATT
-257 4.7 AAAATTTTAAATATT
Position: -143
Score: 4.5
Sequence: AGTTATTAGAAAATT
Locus tag: NWMN_2037
NWMN_2037 -143 4.5 AGTTATTAGAAAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: hmrA
Ortholog function: N-acyl-L-amino acid amidohydrolase
Staphylococcus aureus subsp. aureus N315 SA1935 -143 4.5 AGTTATTAGAAAATT
Staphylococcus capitis SK14 STACA0001_0837 -235 4.6 AATTGTAAGAAAATT
Staphylococcus epidermidis ATCC 12228 SE1731 -113 4.6 AATTGTAAGAAAATT
-102 4.2 AATTGTGTAAAAATT
Staphylococcus carnosus subsp. carnosus TM300 Sca_1636 -176 4.1 AATTTATTAAATTTT
Staphylococcus haemolyticus JCSC1435 SH0902 -179 4.7 AATTTTCAAAATTAT
-52 4.5 AATATCCAAAATATT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP0752 -190 4.1 TATTTTTATAAATTT
-181 4.6 AAATTTCAGAAAATG
Position: -220
Score: 5.2
Sequence: AATTTTCAAAAAATT
Locus tag: NWMN_2105
NWMN_2105 -220 5.2 AATTTTCAAAAAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: SA2002
Ortholog function: hypothetical regulator
Staphylococcus aureus subsp. aureus N315 SA2002 -220 5.1 AATTTTTAAAAAATT
Staphylococcus haemolyticus JCSC1435 SH0156 -76 4.8 AATTTTTAAAAATTT
-51 4.2 AAATTTTTAAATTAT
Position: -263
Score: 4.4
Sequence: AATATTATTAAAATT
Position: -183
Score: 4.7
Sequence: ATTTTTTAGAAAAAT
Locus tag: NWMN_2218
NWMN_2218 -263 4.4 AATATTATTAAAATT
-183 4.7 ATTTTTTAGAAAAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: SA2109
Ortholog function: probable amino-acid or metabolite transporter
Staphylococcus aureus subsp. aureus N315 SA2109 -183 4.7 ATTTTTTAGAAAAAT
Staphylococcus capitis SK14 STACA0001_1171 -181 5.1 AATTTTCAGAAAAAT
-101 4.1 AATTGTAAAAATTTT
Staphylococcus epidermidis ATCC 12228 SE1892 -98 4.4 AATTGTAAAAATATT
Staphylococcus carnosus subsp. carnosus TM300 Sca_1812 -468 4.4 ATTATACTGAAAATT
-414 4.4 AATATTCAAATAATA
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP0591 -88 4.4 AATTGTTTAAATTTT
-79 4.4 AATTTTTTGAATTTA
Position: -78
Score: 4.9
Sequence: AATTTTCAGAAAAGT
Locus tag: NWMN_2222
NWMN_2222 -78 4.9 AATTTTCAGAAAAGT
Supported by regulated orthologs from reference regulons
Ortholog gene name: yocS
Ortholog function: Uncharacterized sodium-dependent transporter yocS
Staphylococcus aureus subsp. aureus N315 SA2112 -87 4.2 AATAATCTTAATTTT
-78 4.9 AATTTTCAGAAAAGT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP0585 -90 4.5 AAAAATTAGAATATT
-81 5.2 AATATTTAGAAAATT
Position: -108
Score: 4.3
Sequence: TATATTTAAAAAAAT
Locus tag: NWMN_2337
NWMN_2337 -108 4.3 TATATTTAAAAAAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: aapA
Ortholog function: D-serine/D-alanine/glycine transporter
Staphylococcus aureus subsp. aureus N315 SA2226 -108 4.3 TATATTTAAAAAAAT
Staphylococcus aureus subsp. aureus N315 SA2227 -108 4.3 TATATTTAAAAAAAT
Staphylococcus capitis SK14 STACA0001_1050 -166 4.8 AATTTTTTGATTATT
-157 4.7 ATTATTCTAAAAAAT
Staphylococcus epidermidis ATCC 12228 SE2004 -93 4.9 ATATTTCTGAAAATT
Staphylococcus carnosus subsp. carnosus TM300 Sca_1918 -126 4.6 AATTTTCTTATAATT
Staphylococcus haemolyticus JCSC1435 SH0623 -231 5.1 AATTTTCAGAAATTT
Position: -85
Score: 4.7
Sequence: AATTTTCTGCAAATT
Locus tag: NWMN_2343
NWMN_2343 -85 4.7 AATTTTCTGCAAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: SA2233
Ortholog function: integral membrane efflux protein
Staphylococcus aureus subsp. aureus N315 SA2233 -85 4.7 AATTTTCTGCAAATT
Staphylococcus capitis SK14 STACA0001_1042 -252 5.2 AATTTTCTAAAAATT
Staphylococcus epidermidis ATCC 12228 SE2010 -246 5.2 AATTTTCTAAAAATT
Position: -82
Score: 4.1
Sequence: ATTTGTTTAACAATT
Locus tag: NWMN_2347
NWMN_2347 -82 4.1 ATTTGTTTAACAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: opuCA
Ortholog function: glycine betaine/carnitine/choline ABC transporter opuCA
Staphylococcus aureus subsp. aureus N315 SA2237 -76 4.1 ATTTGTTTAACAATT
Staphylococcus epidermidis ATCC 12228 SE0222 -43 4 TATTTTTTAACAAAT
Staphylococcus carnosus subsp. carnosus TM300 Sca_1934 -517 4.7 ATTTGTCTGAATATT
Position: -75
Score: 4.9
Sequence: TATTTTCTGAAAATT
Locus tag: NWMN_2370
NWMN_2370 -75 4.9 TATTTTCTGAAAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: SA2261
Ortholog function: putative p-aminobenzoyl-glutamate transporter
Staphylococcus aureus subsp. aureus N315 SA2261 -75 4.9 CATTTTCTGAAAATT
Staphylococcus capitis SK14 STACA0001_1021 -78 5.1 AAATTTCAGAAAATT
Staphylococcus carnosus subsp. carnosus TM300 Sca_2265 -83 4.8 AATTTTCAGAATTAT
Staphylococcus haemolyticus JCSC1435 SH0589 -75 5.1 AAATTTCTGAAAATT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP0435 -75 4.9 TATTTTCAGAATATT
Position: -205
Score: 4.8
Sequence: ATTAATCTGAAAATT
Locus tag: NWMN_2460
NWMN_2460 -205 4.8 ATTAATCTGAAAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: mtnE
Ortholog function: transaminase MtnE involved in methionine biosynthesis via salvage pathway
Staphylococcus aureus subsp. aureus N315 SA2347 -205 4.8 ATTAATCTGAAAATT
Staphylococcus capitis SK14 STACA0001_0934 -212 4.2 AAATGTTTGAAAATA
-93 4.6 ACTTATCTGAAAATT
Staphylococcus epidermidis ATCC 12228 SE2122 -61 4.4 TTATTTCAGAAAATT
-52 4.5 AAAATTCTAACTATT
Staphylococcus carnosus subsp. carnosus TM300 Sca_0010 -257 4.4 AAATGTCAGAATTTT
Staphylococcus haemolyticus JCSC1435 SH0492 -253 4.5 ATAAATCTGAAAATT
-244 4.4 AAAATTATAAATATT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP0294 -203 4.3 AATATTCTGATAAAA
Macrococcus caseolyticus JCSC5402 MCCL_0180 -222 4.8 AATATTCTGAATACT
Position: -179
Score: 4.7
Sequence: AAAATTCAGAATTTT
Locus tag: NWMN_2470
NWMN_2470 -179 4.7 AAAATTCAGAATTTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: SA2357
Ortholog function: putative regulatory protein
Staphylococcus aureus subsp. aureus N315 SA2357 -188 4.2 CTTTATCTAAAAATT
-179 4.7 AAAATTCAGAATTTT
Staphylococcus capitis SK14 STACA0001_0926 -184 4.6 AATTATCTAAATTTT
-175 4.4 AATTTTCTGAAAACG
Staphylococcus epidermidis ATCC 12228 SE2129 -172 5.1 AATTTTCAGAAAAAT
Staphylococcus carnosus subsp. carnosus TM300 Sca_2043 -282 4.7 CATATTTTGAAAATT
-69 4.5 TATTATCAGAATATT
Staphylococcus haemolyticus JCSC1435 SH0484 -156 5.3 AATATTCTGAAAATT
-147 4.1 AAAATTTAGAATTTG
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP0292 -65 5.3 AATATTCTGAAAATT
-56 4.2 AAAATTAAGAAAATA
Position: -227
Score: 4.9
Sequence: AATTGTTAGAAAATT
Position: -103
Score: 4.8
Sequence: ATTTTTCAGAATTTT
Locus tag: NWMN_2500
NWMN_2500 -227 4.9 AATTGTTAGAAAATT
-103 4.8 ATTTTTCAGAATTTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: SA2396
Ortholog function: putative amino acid transporter
Staphylococcus aureus subsp. aureus N315 SA2396 -226 4.9 AATTGTTAGAAAATT
-103 4.8 ATTTTTCAGAATTTT
-94 4.2 AATTTTTAGACAAAA
Staphylococcus capitis SK14 STACA0001_0893 -295 4.3 AATTTGTAAAATATT
-160 4.8 ATTTTTCAGAATTTT
-151 4.2 AATTTTTAGACAAAA
Staphylococcus epidermidis ATCC 12228 SE2147 -165 4.8 ATTTTTCAGAATTTT
-156 4.2 AATTTTTAGACAAAA
Staphylococcus haemolyticus JCSC1435 SH0460 -114 5.1 AATTTTCAGAAATTT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP0274 -98 5.3 AATTTTCTGAATATT
-89 4.3 AATATTTAGATATAT
Position: -127
Score: 4.5
Sequence: AATTATCAGAATATA
Locus tag: NWMN_2501
NWMN_2501 -127 4.5 AATTATCAGAATATA
Supported by regulated orthologs from reference regulons
Ortholog gene name: gabT
Ortholog function: 4-aminobutyrate aminotransferase
Staphylococcus aureus subsp. aureus N315 SA2397 -136 4 AAAATTCTTAATTAT
-127 4.5 AATTATCAGAATATA
Staphylococcus capitis SK14 STACA0001_0892 -175 4.7 AATATTTTAATAATT
-166 4.3 ATAATTCAGAAAATA
Staphylococcus epidermidis ATCC 12228 SE2148 -164 4.6 AATATTCTAAATTAT
-155 4.6 AATTATCAGAAAATA
Staphylococcus carnosus subsp. carnosus TM300 Sca_0283 -127 4.8 AAATATCTGAAAATT
Staphylococcus haemolyticus JCSC1435 SH0459 -145 4.6 ATTATTCAGAAAATA
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP0353 -218 4.6 ATTTTTCAGAATATA
Position: -109
Score: 4.5
Sequence: TATATTCTGATAATT
Locus tag: NWMN_2502
NWMN_2502 -109 4.5 TATATTCTGATAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: SA2398
Ortholog function: hypothetical protein
Staphylococcus aureus subsp. aureus N315 SA2398 -109 4.5 TATATTCTGATAATT
-100 4 ATAATTAAGAATTTT
Staphylococcus capitis SK14 STACA0001_0891 -131 4.3 TATTTTCTGAATTAT
-122 4.7 AATTATTAAAATATT
Staphylococcus epidermidis ATCC 12228 SE2150 -125 4.6 TATTTTCTGATAATT
-116 4.6 ATAATTTAGAATATT
Staphylococcus haemolyticus JCSC1435 SH0457 -89 5 AATTTTTAAAATATT
-80 4.8 AATATTCTAAATTTT
Position: -199
Score: 4.3
Sequence: AAATTTTAAAATATA
Position: -175
Score: 4.7
Sequence: AATTTTTAAAATTTT
Position: -68
Score: 4.6
Sequence: ACTTTTCTGAAAAAT
Locus tag: NWMN_2536
NWMN_2536 -199 4.3 AAATTTTAAAATATA
-175 4.7 AATTTTTAAAATTTT
-68 4.6 ACTTTTCTGAAAAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: aur
Ortholog function: zinc metalloproteinase aureolysin
Staphylococcus aureus subsp. aureus N315 SA2430 -68 4.6 ACTTTTCTGAAAAAT
Staphylococcus capitis SK14 STACA0001_1850 -30 4.2 CTTTTTCAAAAATTT
7 4.4 ATTTTTCAAAATATG
Staphylococcus epidermidis ATCC 12228 SE2219 -69 4.9 ACTTTTCAGAAAATT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP1542 -104 4.3 ATAATTCAAAATAAT
Position: 4
Score: 4.4
Sequence: AATTTTTTAACTTTT
Locus tag: NWMN_2565
NWMN_2565 4 4.4 AATTTTTTAACTTTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: icaA
Ortholog function: intercellular adhesion protein A
Staphylococcus aureus subsp. aureus N315 SA2459 4 4.4 AATTTTTTAACTTTT
Staphylococcus capitis SK14 STACA0001_0088 4 4.4 AATTTTTTAACTTTT
Position: -142
Score: 4.6
Sequence: AATTTTCTGAAAAAG
Locus tag: NWMN_2578
NWMN_2578 -142 4.6 AATTTTCTGAAAAAG
Supported by regulated orthologs from reference regulons
Ortholog gene name: hisZ
Ortholog function: ATP phosphoribosyltransferase regulatory subunit
Staphylococcus aureus subsp. aureus N315 SA2472 -142 4.6 AATTTTCTGAAAAAG
Staphylococcus epidermidis ATCC 12228 SE0270 -115 5.1 AATTTTCTGAAAAAT
Staphylococcus carnosus subsp. carnosus TM300 Sca_0637 -125 4.2 ATTTTTATTAATATT
-116 5 AATATTCAGAATTTT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP0431 -109 4.8 CATTTTCAGAATATT