Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

TF regulons in Proteobacteria

The comparative genomics approach was applied to identify binding sites and reconstruct regulons for 58 groups of orthologous transcription factors in 196 genomes from 21 taxonomic groups of Proteobacteria. Large-scale phylogenomic analysis of the reconstructed TF regulons reveals and classifies various evolutionary processes that shape regulatory networks in Bacteria. These predicted evolutionary processes can be classified into three distinct types: (i) "regulon expansion" in certain taxa compared to other lineages that can be ranged from additions of several regulons members to large-scale shifts in the regulated metabolic pathways; (ii) "fuzzy regulons" when a regulon contains a small conserved core and a large periphery of taxon- and genome-specific genes; (iii) "regulon loss or acquisition" when entire regulon (including a TF and all its TFBSs and target genes) is absent or present only in specific genomes within a taxonomic group of bacteria. The most conserved regulatory interactions were identified within TF regulons that are involved in the control of certain essential biosynthetic pathways.

Reconstructed regulons
Regulator alpha beta gamma delta
[Genomes count] [15] [15] [9] [7] [4] [6] [8] [11] [12] [12] [10] [9] [16] [9] [6] [12] [8] [4] [4] [10] [9]
AgaR 3 AgaR2 - Enterobacteriales

Regulon is present in 3 out of 12 genomes
; 3 AgaR - Enterobacteriales

Regulon is present in 3 out of 12 genomes
4 AgaR - Vibrionales

Regulon is present in 4 out of 10 genomes
1 AgaR - Pasteurellales

Regulon is present in 1 out of 9 genomes
4 AgaR - Shewanellaceae

Regulon is present in 4 out of 16 genomes
2 AgaR - Psychromonadaceae/Aeromonadales

Regulon is present in 2 out of 6 genomes
1 AgaR - Xanthomonadales

Regulon is present in 1 out of 4 genomes
ArgR 12 ArgR - Enterobacteriales

Regulon is present in 12 out of 12 genomes
10 ArgR - Vibrionales

Regulon is present in 10 out of 10 genomes
9 ArgR - Pasteurellales

Regulon is present in 9 out of 9 genomes
16 ArgR - Shewanellaceae

Regulon is present in 16 out of 16 genomes
9 ArgR - Alteromonadales

Regulon is present in 9 out of 9 genomes
6 ArgR - Psychromonadaceae/Aeromonadales

Regulon is present in 6 out of 6 genomes
BirA 8 BirA - Various betaproteobacteria

Regulon is present in 8 out of 12 genomes
12 BirA - Enterobacteriales

Regulon is present in 12 out of 12 genomes
10 BirA - Vibrionales

Regulon is present in 10 out of 10 genomes
16 BirA - Shewanellaceae

Regulon is present in 16 out of 16 genomes
9 BirA - Alteromonadales

Regulon is present in 9 out of 9 genomes
6 BirA - Psychromonadaceae/Aeromonadales

Regulon is present in 6 out of 6 genomes
11 BirA - Oceanospirillales/Alteromonadales

Regulon is present in 11 out of 12 genomes
8 BirA - Pseudomonadaceae

Regulon is present in 8 out of 8 genomes
3 BirA - Xanthomonadales

Regulon is present in 3 out of 4 genomes
3 BirA - Desulfovibrionales

Regulon is present in 3 out of 10 genomes
8 BirA - Desulfuromonadales

Regulon is present in 8 out of 9 genomes
CadR-PbrR 13 CadR-PbrR - Rhizobiales

Regulon is present in 13 out of 15 genomes
11 CadR-PbrR - Rhodobacterales

Regulon is present in 11 out of 15 genomes
3 CadR-PbrR - Rhodospirillales

Regulon is present in 3 out of 9 genomes
5 CadR-PbrR - Sphingomonadales

Regulon is present in 5 out of 7 genomes
2 CadR-PbrR - Caulobacterales

Regulon is present in 2 out of 4 genomes
6 CadR-PbrR - Ralstonia

Regulon is present in 6 out of 6 genomes
7 CadR-PbrR - Burkholderia

Regulon is present in 7 out of 8 genomes
10 CadR-PbrR - Comamonadaceae

Regulon is present in 10 out of 11 genomes
5 CadR-PbrR - Various betaproteobacteria

Regulon is present in 5 out of 12 genomes
4 CadR-PbrR - Pasteurellales

Regulon is present in 4 out of 9 genomes
4 CadR-PbrR - Shewanellaceae

Regulon is present in 4 out of 16 genomes
5 CadR-PbrR - Alteromonadales

Regulon is present in 5 out of 9 genomes
1 CadR-PbrR - Psychromonadaceae/Aeromonadales

Regulon is present in 1 out of 6 genomes
7 CadR-PbrR - Oceanospirillales/Alteromonadales

Regulon is present in 7 out of 12 genomes
8 CadR-PbrR - Pseudomonadaceae

Regulon is present in 8 out of 8 genomes
2 CadR-PbrR - Moraxellaceae

Regulon is present in 2 out of 4 genomes
2 CadR-PbrR - Desulfovibrionales

Regulon is present in 2 out of 10 genomes
1 CadR-PbrR - Desulfuromonadales

Regulon is present in 1 out of 9 genomes
CueR 8 CueR - Rhizobiales

Regulon is present in 8 out of 15 genomes
9 CueR - Rhodobacterales

Regulon is present in 9 out of 15 genomes
3 CueR - Rhodospirillales

Regulon is present in 3 out of 9 genomes
1 CueR - Sphingomonadales

Regulon is present in 1 out of 7 genomes
2 CueR - Caulobacterales

Regulon is present in 2 out of 4 genomes
6 CueR - Ralstonia

Regulon is present in 6 out of 6 genomes
6 CueR - Burkholderia

Regulon is present in 6 out of 8 genomes
9 CueR - Comamonadaceae

Regulon is present in 9 out of 11 genomes
3 CueR - Various betaproteobacteria

Regulon is present in 3 out of 12 genomes
12 CueR - Enterobacteriales

Regulon is present in 12 out of 12 genomes
10 CueR - Vibrionales

Regulon is present in 10 out of 10 genomes
8 CueR - Pasteurellales

Regulon is present in 8 out of 9 genomes
14 CueR - Shewanellaceae

Regulon is present in 14 out of 16 genomes
; 3 CueR2 - Shewanellaceae

Regulon is present in 3 out of 16 genomes
1 CueR - Alteromonadales

Regulon is present in 1 out of 9 genomes
6 CueR - Psychromonadaceae/Aeromonadales

Regulon is present in 6 out of 6 genomes
2 CueR - Oceanospirillales/Alteromonadales

Regulon is present in 2 out of 12 genomes
8 CueR - Pseudomonadaceae

Regulon is present in 8 out of 8 genomes
1 CueR - Moraxellaceae

Regulon is present in 1 out of 4 genomes
1 CueR - Xanthomonadales

Regulon is present in 1 out of 4 genomes
ExuR/UxuR 1 UxuR - Rhodobacterales

Regulon is present in 1 out of 15 genomes
6 UxuR - Enterobacteriales

Regulon is present in 6 out of 12 genomes
; 8 ExuR - Enterobacteriales

Regulon is present in 8 out of 12 genomes
4 UxuR - Vibrionales

Regulon is present in 4 out of 10 genomes
4 UxuR - Pasteurellales

Regulon is present in 4 out of 9 genomes
3 UxuR - Psychromonadaceae/Aeromonadales

Regulon is present in 3 out of 6 genomes
1 UxuR - Oceanospirillales/Alteromonadales

Regulon is present in 1 out of 12 genomes
FabR 12 FabR - Enterobacteriales

Regulon is present in 12 out of 12 genomes
10 FabR - Vibrionales

Regulon is present in 10 out of 10 genomes
8 FabR - Pasteurellales

Regulon is present in 8 out of 9 genomes
16 FabR - Shewanellaceae

Regulon is present in 16 out of 16 genomes
9 FabR - Alteromonadales

Regulon is present in 9 out of 9 genomes
4 FabR - Psychromonadaceae/Aeromonadales

Regulon is present in 4 out of 6 genomes
3 FabR - Oceanospirillales/Alteromonadales

Regulon is present in 3 out of 12 genomes
; 3 FabR2 - Oceanospirillales/Alteromonadales

Regulon is present in 3 out of 12 genomes
6 DesT - Pseudomonadaceae

Regulon is present in 6 out of 8 genomes
; 2 FabR2 - Pseudomonadaceae

Regulon is present in 2 out of 8 genomes
2 FabR - Moraxellaceae

Regulon is present in 2 out of 4 genomes
3 FabR - Xanthomonadales

Regulon is present in 3 out of 4 genomes
FadP 6 FadP - Ralstonia

Regulon is present in 6 out of 6 genomes
8 FadP - Burkholderia

Regulon is present in 8 out of 8 genomes
11 FadP - Comamonadaceae

Regulon is present in 11 out of 11 genomes
FadR 12 FadR - Enterobacteriales

Regulon is present in 12 out of 12 genomes
10 FadR - Vibrionales

Regulon is present in 10 out of 10 genomes
9 FadR - Pasteurellales

Regulon is present in 9 out of 9 genomes
16 FadR - Shewanellaceae

Regulon is present in 16 out of 16 genomes
9 FadR - Alteromonadales

Regulon is present in 9 out of 9 genomes
5 FadR - Psychromonadaceae/Aeromonadales

Regulon is present in 5 out of 6 genomes
FruR 12 FruR - Enterobacteriales

Regulon is present in 12 out of 12 genomes
10 FruR - Vibrionales

Regulon is present in 10 out of 10 genomes
3 FruR - Pasteurellales

Regulon is present in 3 out of 9 genomes
6 FruR - Psychromonadaceae/Aeromonadales

Regulon is present in 6 out of 6 genomes
2 FruR - Oceanospirillales/Alteromonadales

Regulon is present in 2 out of 12 genomes
8 FruR - Pseudomonadaceae

Regulon is present in 8 out of 8 genomes
FUR 14 Mur - Rhizobiales

Regulon is present in 14 out of 15 genomes
13 Mur - Rhodobacterales

Regulon is present in 13 out of 15 genomes
; 2 Fur - Rhodobacterales

Regulon is present in 2 out of 15 genomes
9 Fur - Rhodospirillales

Regulon is present in 9 out of 9 genomes
7 Fur - Sphingomonadales

Regulon is present in 7 out of 7 genomes
4 Fur - Caulobacterales

Regulon is present in 4 out of 4 genomes
6 Fur - Ralstonia

Regulon is present in 6 out of 6 genomes
12 Fur - Enterobacteriales

Regulon is present in 12 out of 12 genomes
10 Fur - Vibrionales

Regulon is present in 10 out of 10 genomes
9 Fur - Pasteurellales

Regulon is present in 9 out of 9 genomes
16 Fur - Shewanellaceae

Regulon is present in 16 out of 16 genomes
9 Fur - Alteromonadales

Regulon is present in 9 out of 9 genomes
6 Fur - Psychromonadaceae/Aeromonadales

Regulon is present in 6 out of 6 genomes
4 Fur - Xanthomonadales

Regulon is present in 4 out of 4 genomes
10 Fur - Desulfovibrionales

Regulon is present in 10 out of 10 genomes
9 Fur - Desulfuromonadales

Regulon is present in 9 out of 9 genomes
GlcC 6 GlcC - Rhizobiales

Regulon is present in 6 out of 15 genomes
1 GlcC - Rhodobacterales

Regulon is present in 1 out of 15 genomes
4 GlcC - Burkholderia

Regulon is present in 4 out of 8 genomes
2 GlcC - Various betaproteobacteria

Regulon is present in 2 out of 12 genomes
1 GlcC - Enterobacteriales

Regulon is present in 1 out of 12 genomes
3 GlcC - Oceanospirillales/Alteromonadales

Regulon is present in 3 out of 12 genomes
6 GlcC - Pseudomonadaceae

Regulon is present in 6 out of 8 genomes
GntR 1 GntR - Rhizobiales

Regulon is present in 1 out of 15 genomes
1 GntR - Rhodospirillales

Regulon is present in 1 out of 9 genomes
1 GntR - Burkholderia

Regulon is present in 1 out of 8 genomes
8 GntR - Comamonadaceae

Regulon is present in 8 out of 11 genomes
1 GntR - Various betaproteobacteria

Regulon is present in 1 out of 12 genomes
12 GntR - Enterobacteriales  

Regulon is present in 12 out of 12 genomes
8 GntR - Vibrionales

Regulon is present in 8 out of 10 genomes
7 GntR - Pasteurellales

Regulon is present in 7 out of 9 genomes
1 GntR - Shewanellaceae

Regulon is present in 1 out of 16 genomes
1 GntR - Alteromonadales

Regulon is present in 1 out of 9 genomes
5 GntR - Psychromonadaceae/Aeromonadales

Regulon is present in 5 out of 6 genomes
3 GntR - Oceanospirillales/Alteromonadales

Regulon is present in 3 out of 12 genomes
8 GntR - Pseudomonadaceae

Regulon is present in 8 out of 8 genomes
HexR 6 HexR - Ralstonia

Regulon is present in 6 out of 6 genomes
8 HexR - Burkholderia

Regulon is present in 8 out of 8 genomes
9 HexR - Comamonadaceae

Regulon is present in 9 out of 11 genomes
2 HexR - Various betaproteobacteria

Regulon is present in 2 out of 12 genomes
11 HexR - Enterobacteriales

Regulon is present in 11 out of 12 genomes
10 HexR - Vibrionales

Regulon is present in 10 out of 10 genomes
16 HexR - Shewanellaceae

Regulon is present in 16 out of 16 genomes
5 HexR - Alteromonadales

Regulon is present in 5 out of 9 genomes
6 HexR - Psychromonadaceae/Aeromonadales

Regulon is present in 6 out of 6 genomes
3 HexR - Oceanospirillales/Alteromonadales

Regulon is present in 3 out of 12 genomes
; 3 HexR2 - Oceanospirillales/Alteromonadales

Regulon is present in 3 out of 12 genomes
8 HexR1 - Pseudomonadaceae

Regulon is present in 8 out of 8 genomes
; 8 HexR - Pseudomonadaceae

Regulon is present in 8 out of 8 genomes
HrcA 15 HrcA - Rhizobiales

Regulon is present in 15 out of 15 genomes
15 HrcA - Rhodobacterales

Regulon is present in 15 out of 15 genomes
9 HrcA - Rhodospirillales

Regulon is present in 9 out of 9 genomes
7 HrcA - Sphingomonadales

Regulon is present in 7 out of 7 genomes
4 HrcA - Caulobacterales

Regulon is present in 4 out of 4 genomes
6 HrcA - Ralstonia

Regulon is present in 6 out of 6 genomes
8 HrcA - Burkholderia

Regulon is present in 8 out of 8 genomes
11 HrcA - Comamonadaceae

Regulon is present in 11 out of 11 genomes
11 HrcA - Various betaproteobacteria

Regulon is present in 11 out of 12 genomes
2 HrcA - Alteromonadales

Regulon is present in 2 out of 9 genomes
1 HrcA - Oceanospirillales/Alteromonadales

Regulon is present in 1 out of 12 genomes
4 HrcA - Xanthomonadales

Regulon is present in 4 out of 4 genomes
6 HrcA - Desulfovibrionales

Regulon is present in 6 out of 10 genomes
9 HrcA - Desulfuromonadales

Regulon is present in 9 out of 9 genomes
HutC 10 HutC - Rhizobiales

Regulon is present in 10 out of 15 genomes
10 HutC - Rhodobacterales

Regulon is present in 10 out of 15 genomes
5 HutC - Rhodospirillales

Regulon is present in 5 out of 9 genomes
2 HutC - Sphingomonadales

Regulon is present in 2 out of 7 genomes
4 HutC - Caulobacterales

Regulon is present in 4 out of 4 genomes
6 HutC - Ralstonia

Regulon is present in 6 out of 6 genomes
8 HutC - Burkholderia

Regulon is present in 8 out of 8 genomes
7 HutC - Comamonadaceae

Regulon is present in 7 out of 11 genomes
1 HutC - Various betaproteobacteria

Regulon is present in 1 out of 12 genomes
8 HutC - Enterobacteriales

Regulon is present in 8 out of 12 genomes
10 HutC - Vibrionales

Regulon is present in 10 out of 10 genomes
16 HutC - Shewanellaceae

Regulon is present in 16 out of 16 genomes
8 HutC - Alteromonadales

Regulon is present in 8 out of 9 genomes
4 HutC - Psychromonadaceae/Aeromonadales

Regulon is present in 4 out of 6 genomes
3 HutC - Oceanospirillales/Alteromonadales

Regulon is present in 3 out of 12 genomes
6 HutC - Pseudomonadaceae

Regulon is present in 6 out of 8 genomes
2 HutC - Moraxellaceae

Regulon is present in 2 out of 4 genomes
3 HutC - Xanthomonadales

Regulon is present in 3 out of 4 genomes
HypR 6 HypR - Rhizobiales

Regulon is present in 6 out of 15 genomes
3 HypR - Rhodobacterales

Regulon is present in 3 out of 15 genomes
; 5 HypR2 - Rhodobacterales

Regulon is present in 5 out of 15 genomes
1 HypR - Rhodospirillales

Regulon is present in 1 out of 9 genomes
1 HypR - Ralstonia

Regulon is present in 1 out of 6 genomes
3 HypR - Burkholderia

Regulon is present in 3 out of 8 genomes
1 HypR - Enterobacteriales

Regulon is present in 1 out of 12 genomes
1 HypR - Vibrionales

Regulon is present in 1 out of 10 genomes
16 HypR - Shewanellaceae

Regulon is present in 16 out of 16 genomes
3 HypR - Alteromonadales

Regulon is present in 3 out of 9 genomes
3 HypR - Psychromonadaceae/Aeromonadales

Regulon is present in 3 out of 6 genomes
2 HypR - Oceanospirillales/Alteromonadales

Regulon is present in 2 out of 12 genomes
1 HypR - Pseudomonadaceae

Regulon is present in 1 out of 8 genomes
Irr 15 Irr - Rhizobiales

Regulon is present in 15 out of 15 genomes
12 Irr - Rhodobacterales

Regulon is present in 12 out of 15 genomes
5 Irr - Rhodospirillales

Regulon is present in 5 out of 9 genomes
IscR 14 IscR - Rhodobacterales

Regulon is present in 14 out of 15 genomes
5 IscR - Rhodospirillales

Regulon is present in 5 out of 9 genomes
; 7 IscR2 - Rhodospirillales

Regulon is present in 7 out of 9 genomes
7 IscR - Sphingomonadales

Regulon is present in 7 out of 7 genomes
4 IscR - Caulobacterales

Regulon is present in 4 out of 4 genomes
6 IscR - Ralstonia

Regulon is present in 6 out of 6 genomes
8 IscR - Burkholderia

Regulon is present in 8 out of 8 genomes
11 IscR - Comamonadaceae

Regulon is present in 11 out of 11 genomes
12 IscR - Various betaproteobacteria

Regulon is present in 12 out of 12 genomes
12 IscR - Enterobacteriales

Regulon is present in 12 out of 12 genomes
10 IscR - Vibrionales

Regulon is present in 10 out of 10 genomes
9 IscR - Pasteurellales

Regulon is present in 9 out of 9 genomes
16 IscR - Shewanellaceae

Regulon is present in 16 out of 16 genomes
9 IscR - Alteromonadales

Regulon is present in 9 out of 9 genomes
6 IscR - Psychromonadaceae/Aeromonadales

Regulon is present in 6 out of 6 genomes
12 IscR - Oceanospirillales/Alteromonadales

Regulon is present in 12 out of 12 genomes
8 IscR - Pseudomonadaceae

Regulon is present in 8 out of 8 genomes
4 IscR - Moraxellaceae

Regulon is present in 4 out of 4 genomes
4 IscR - Xanthomonadales

Regulon is present in 4 out of 4 genomes
6 IscR - Desulfuromonadales

Regulon is present in 6 out of 9 genomes
KdgR 9 KdgR - Enterobacteriales

Regulon is present in 9 out of 12 genomes
4 KdgR - Vibrionales

Regulon is present in 4 out of 10 genomes
2 KdgR - Pasteurellales

Regulon is present in 2 out of 9 genomes
LexA 15 LexA - Rhizobiales

Regulon is present in 15 out of 15 genomes
15 LexA - Rhodobacterales

Regulon is present in 15 out of 15 genomes
9 LexA - Rhodospirillales

Regulon is present in 9 out of 9 genomes
7 LexA - Sphingomonadales

Regulon is present in 7 out of 7 genomes
4 LexA - Caulobacterales

Regulon is present in 4 out of 4 genomes
6 LexA - Ralstonia

Regulon is present in 6 out of 6 genomes
8 LexA - Burkholderia

Regulon is present in 8 out of 8 genomes
11 LexA - Comamonadaceae

Regulon is present in 11 out of 11 genomes
4 LexA - Various betaproteobacteria

Regulon is present in 4 out of 12 genomes
12 LexA - Enterobacteriales

Regulon is present in 12 out of 12 genomes
10 LexA - Vibrionales

Regulon is present in 10 out of 10 genomes
9 LexA - Pasteurellales

Regulon is present in 9 out of 9 genomes
16 LexA - Shewanellaceae

Regulon is present in 16 out of 16 genomes
9 LexA - Alteromonadales

Regulon is present in 9 out of 9 genomes
6 LexA - Psychromonadaceae/Aeromonadales

Regulon is present in 6 out of 6 genomes
12 LexA - Oceanospirillales/Alteromonadales

Regulon is present in 12 out of 12 genomes
8 LexA - Pseudomonadaceae

Regulon is present in 8 out of 8 genomes
4 LexA - Xanthomonadales

Regulon is present in 4 out of 4 genomes
; 2 LexA2 - Xanthomonadales

Regulon is present in 2 out of 4 genomes
1 LexA - Desulfovibrionales

Regulon is present in 1 out of 10 genomes
6 LexA - Desulfuromonadales

Regulon is present in 6 out of 9 genomes
LiuQ 4 LiuQ - Ralstonia

Regulon is present in 4 out of 6 genomes
8 LiuQ - Burkholderia

Regulon is present in 8 out of 8 genomes
2 LiuQ - Comamonadaceae

Regulon is present in 2 out of 11 genomes
LiuR 9 LiuR - Rhizobiales

Regulon is present in 9 out of 15 genomes
13 LiuR - Rhodobacterales

Regulon is present in 13 out of 15 genomes
3 LiuR - Rhodospirillales

Regulon is present in 3 out of 9 genomes
6 LiuR - Sphingomonadales

Regulon is present in 6 out of 7 genomes
4 LiuR - Caulobacterales

Regulon is present in 4 out of 4 genomes
6 LiuR - Ralstonia

Regulon is present in 6 out of 6 genomes
2 LiuR - Burkholderia

Regulon is present in 2 out of 8 genomes
9 LiuR - Comamonadaceae

Regulon is present in 9 out of 11 genomes
; 1 LiuR2 - Comamonadaceae

Regulon is present in 1 out of 11 genomes
5 LiuR - Various betaproteobacteria

Regulon is present in 5 out of 12 genomes
6 LiuR - Vibrionales

Regulon is present in 6 out of 10 genomes
16 LiuR - Shewanellaceae

Regulon is present in 16 out of 16 genomes
8 LiuR - Alteromonadales

Regulon is present in 8 out of 9 genomes
2 LiuR - Psychromonadaceae/Aeromonadales

Regulon is present in 2 out of 6 genomes
6 LiuR - Oceanospirillales/Alteromonadales

Regulon is present in 6 out of 12 genomes
8 LiuR - Pseudomonadaceae

Regulon is present in 8 out of 8 genomes
LldR 1 LldR - Rhizobiales

Regulon is present in 1 out of 15 genomes
2 LldR - Rhodobacterales

Regulon is present in 2 out of 15 genomes
4 LldR - Rhodospirillales

Regulon is present in 4 out of 9 genomes
4 LldR - Ralstonia

Regulon is present in 4 out of 6 genomes
8 LldR - Burkholderia

Regulon is present in 8 out of 8 genomes
3 LldR - Comamonadaceae

Regulon is present in 3 out of 11 genomes
5 LldR - Various betaproteobacteria

Regulon is present in 5 out of 12 genomes
5 LldR - Enterobacteriales

Regulon is present in 5 out of 12 genomes
4 LldR - Oceanospirillales/Alteromonadales

Regulon is present in 4 out of 12 genomes
7 LldR - Pseudomonadaceae

Regulon is present in 7 out of 8 genomes
2 LldR - Moraxellaceae

Regulon is present in 2 out of 4 genomes
1 LldR - Xanthomonadales

Regulon is present in 1 out of 4 genomes
6 LldR - Desulfovibrionales

Regulon is present in 6 out of 10 genomes
4 LldR - Desulfuromonadales

Regulon is present in 4 out of 9 genomes
MerR 2 MerR - Rhizobiales

Regulon is present in 2 out of 15 genomes
1 MerR - Rhodobacterales

Regulon is present in 1 out of 15 genomes
3 MerR - Sphingomonadales

Regulon is present in 3 out of 7 genomes
4 MerR - Ralstonia

Regulon is present in 4 out of 6 genomes
2 MerR - Burkholderia

Regulon is present in 2 out of 8 genomes
5 MerR - Comamonadaceae

Regulon is present in 5 out of 11 genomes
2 MerR - Various betaproteobacteria

Regulon is present in 2 out of 12 genomes
4 MerR - Shewanellaceae

Regulon is present in 4 out of 16 genomes
3 MerR - Alteromonadales

Regulon is present in 3 out of 9 genomes
2 MerR - Psychromonadaceae/Aeromonadales

Regulon is present in 2 out of 6 genomes
2 MerR - Oceanospirillales/Alteromonadales

Regulon is present in 2 out of 12 genomes
1 MerR - Pseudomonadaceae

Regulon is present in 1 out of 8 genomes
1 MerR - Xanthomonadales

Regulon is present in 1 out of 4 genomes
MetJ 12 MetJ - Enterobacteriales

Regulon is present in 12 out of 12 genomes
10 MetJ - Vibrionales

Regulon is present in 10 out of 10 genomes
9 MetJ - Pasteurellales

Regulon is present in 9 out of 9 genomes
16 MetJ - Shewanellaceae

Regulon is present in 16 out of 16 genomes
9 MetJ - Alteromonadales

Regulon is present in 9 out of 9 genomes
6 MetJ - Psychromonadaceae/Aeromonadales

Regulon is present in 6 out of 6 genomes
MetR 13 MetR - Rhodobacterales

Regulon is present in 13 out of 15 genomes
6 MetR - Ralstonia

Regulon is present in 6 out of 6 genomes
7 MetR - Burkholderia

Regulon is present in 7 out of 8 genomes
5 MetR - Comamonadaceae

Regulon is present in 5 out of 11 genomes
8 MetR - Various betaproteobacteria

Regulon is present in 8 out of 12 genomes
12 MetR - Enterobacteriales

Regulon is present in 12 out of 12 genomes
10 MetR - Vibrionales

Regulon is present in 10 out of 10 genomes
8 MetR - Pasteurellales

Regulon is present in 8 out of 9 genomes
16 MetR - Shewanellaceae

Regulon is present in 16 out of 16 genomes
4 MetR - Alteromonadales

Regulon is present in 4 out of 9 genomes
5 MetR - Psychromonadaceae/Aeromonadales

Regulon is present in 5 out of 6 genomes
12 MetR - Oceanospirillales/Alteromonadales

Regulon is present in 12 out of 12 genomes
8 MetR - Pseudomonadaceae

Regulon is present in 8 out of 8 genomes
3 MetR - Xanthomonadales

Regulon is present in 3 out of 4 genomes
MntR 4 MntR - Rhizobiales

Regulon is present in 4 out of 15 genomes
3 MntR - Rhodobacterales

Regulon is present in 3 out of 15 genomes
4 MntR - Rhodospirillales

Regulon is present in 4 out of 9 genomes
7 MntR - Enterobacteriales

Regulon is present in 7 out of 12 genomes
4 MntR - Xanthomonadales

Regulon is present in 4 out of 4 genomes
ModE 9 ModE - Rhizobiales

Regulon is present in 9 out of 15 genomes
; 1 ModE - Rhizobiales

Regulon is present in 1 out of 15 genomes
4 ModE2 - Rhodobacterales

Regulon is present in 4 out of 15 genomes
; 1 ModE - Rhodobacterales

Regulon is present in 1 out of 15 genomes
2 ModE2 - Rhodospirillales

Regulon is present in 2 out of 9 genomes
; 2 ModE - Rhodospirillales

Regulon is present in 2 out of 9 genomes
2 ModE2 - Sphingomonadales

Regulon is present in 2 out of 7 genomes
2 ModE - Caulobacterales

Regulon is present in 2 out of 4 genomes
6 ModE - Ralstonia

Regulon is present in 6 out of 6 genomes
; 6 ModE3 - Ralstonia

Regulon is present in 6 out of 6 genomes
7 ModE - Burkholderia

Regulon is present in 7 out of 8 genomes
; 4 ModE2 - Burkholderia

Regulon is present in 4 out of 8 genomes
6 ModE - Comamonadaceae

Regulon is present in 6 out of 11 genomes
; 5 ModE2 - Comamonadaceae

Regulon is present in 5 out of 11 genomes
; 7 ModE3 - Comamonadaceae

Regulon is present in 7 out of 11 genomes
2 ModE - Various betaproteobacteria

Regulon is present in 2 out of 12 genomes
; 2 ModE2 - Various betaproteobacteria

Regulon is present in 2 out of 12 genomes
12 ModE - Enterobacteriales

Regulon is present in 12 out of 12 genomes
2 ModE - Vibrionales

Regulon is present in 2 out of 10 genomes
6 ModE - Pasteurellales

Regulon is present in 6 out of 9 genomes
5 ModE - Shewanellaceae

Regulon is present in 5 out of 16 genomes
2 ModE - Psychromonadaceae/Aeromonadales

Regulon is present in 2 out of 6 genomes
2 ModE - Oceanospirillales/Alteromonadales

Regulon is present in 2 out of 12 genomes
8 ModE - Pseudomonadaceae

Regulon is present in 8 out of 8 genomes
1 ModE - Moraxellaceae

Regulon is present in 1 out of 4 genomes
7 ModE2 - Desulfovibrionales

Regulon is present in 7 out of 10 genomes
7 ModE - Desulfuromonadales

Regulon is present in 7 out of 9 genomes
NadQ 12 NadQ - Rhizobiales

Regulon is present in 12 out of 15 genomes
2 NadQ - Rhodobacterales

Regulon is present in 2 out of 15 genomes
7 NadQ - Rhodospirillales

Regulon is present in 7 out of 9 genomes
4 NadQ - Caulobacterales

Regulon is present in 4 out of 4 genomes
2 NadQ - Comamonadaceae

Regulon is present in 2 out of 11 genomes
1 NadQ - Various betaproteobacteria

Regulon is present in 1 out of 12 genomes
2 NadQ - Moraxellaceae

Regulon is present in 2 out of 4 genomes
NagC 12 NagC - Enterobacteriales

Regulon is present in 12 out of 12 genomes
10 NagC - Vibrionales

Regulon is present in 10 out of 10 genomes
2 NagC - Pasteurellales

Regulon is present in 2 out of 9 genomes
6 NagC - Psychromonadaceae/Aeromonadales

Regulon is present in 6 out of 6 genomes
1 NagC - Oceanospirillales/Alteromonadales

Regulon is present in 1 out of 12 genomes
NagQ 7 NagQ - Rhizobiales

Regulon is present in 7 out of 15 genomes
4 NagQ - Rhodobacterales

Regulon is present in 4 out of 15 genomes
1 NagQ - Rhodospirillales

Regulon is present in 1 out of 9 genomes
3 NagQ - Caulobacterales

Regulon is present in 3 out of 4 genomes
1 NagQ - Ralstonia

Regulon is present in 1 out of 6 genomes
7 NagQ - Burkholderia

Regulon is present in 7 out of 8 genomes
1 NagQ - Various betaproteobacteria

Regulon is present in 1 out of 12 genomes
3 NagQ - Oceanospirillales/Alteromonadales

Regulon is present in 3 out of 12 genomes
2 NagQ - Pseudomonadaceae

Regulon is present in 2 out of 8 genomes
2 NagQ - Xanthomonadales

Regulon is present in 2 out of 4 genomes
NagR 15 NagR - Shewanellaceae

Regulon is present in 15 out of 16 genomes
3 NagR - Alteromonadales

Regulon is present in 3 out of 9 genomes
3 NagR - Oceanospirillales/Alteromonadales

Regulon is present in 3 out of 12 genomes
4 NagR - Xanthomonadales

Regulon is present in 4 out of 4 genomes
NarP 9 NarP - Enterobacteriales

Regulon is present in 9 out of 12 genomes
10 NarP - Vibrionales

Regulon is present in 10 out of 10 genomes
8 NarP - Pasteurellales

Regulon is present in 8 out of 9 genomes
15 NarP - Shewanellaceae

Regulon is present in 15 out of 16 genomes
4 NarP - Psychromonadaceae/Aeromonadales

Regulon is present in 4 out of 6 genomes
NikR 4 NikR - Rhizobiales

Regulon is present in 4 out of 15 genomes
2 NikR - Rhodobacterales

Regulon is present in 2 out of 15 genomes
1 NikR - Rhodospirillales

Regulon is present in 1 out of 9 genomes
1 NikR - Burkholderia

Regulon is present in 1 out of 8 genomes
2 NikR - Comamonadaceae

Regulon is present in 2 out of 11 genomes
2 NikR - Various betaproteobacteria

Regulon is present in 2 out of 12 genomes
6 NikR - Enterobacteriales

Regulon is present in 6 out of 12 genomes
3 NikR - Shewanellaceae

Regulon is present in 3 out of 16 genomes
1 NikR - Pseudomonadaceae

Regulon is present in 1 out of 8 genomes
8 NikR - Desulfovibrionales

Regulon is present in 8 out of 10 genomes
6 NikR - Desulfuromonadales

Regulon is present in 6 out of 9 genomes
NmlR 2 NmlR - Rhizobiales

Regulon is present in 2 out of 15 genomes
1 NmlR - Ralstonia

Regulon is present in 1 out of 6 genomes
7 NmlR - Burkholderia

Regulon is present in 7 out of 8 genomes
2 NmlR - Comamonadaceae

Regulon is present in 2 out of 11 genomes
1 NmlR - Various betaproteobacteria

Regulon is present in 1 out of 12 genomes
2 NmlR - Vibrionales

Regulon is present in 2 out of 10 genomes
2 NmlR - Pasteurellales

Regulon is present in 2 out of 9 genomes
5 NmlR - Shewanellaceae

Regulon is present in 5 out of 16 genomes
1 NmlR - Alteromonadales

Regulon is present in 1 out of 9 genomes
1 NmlR - Pseudomonadaceae

Regulon is present in 1 out of 8 genomes
1 NmlR - Xanthomonadales

Regulon is present in 1 out of 4 genomes
NnrR 9 NnrR - Rhizobiales

Regulon is present in 9 out of 15 genomes
3 NnrR - Rhodobacterales

Regulon is present in 3 out of 15 genomes
1 NnrR - Rhodospirillales

Regulon is present in 1 out of 9 genomes
1 NnrR - Sphingomonadales

Regulon is present in 1 out of 7 genomes
2 NnrR - Caulobacterales

Regulon is present in 2 out of 4 genomes
NorR 6 NorR - Ralstonia

Regulon is present in 6 out of 6 genomes
2 NorR - Burkholderia

Regulon is present in 2 out of 8 genomes
6 NorR - Comamonadaceae

Regulon is present in 6 out of 11 genomes
7 NorR - Enterobacteriales

Regulon is present in 7 out of 12 genomes
6 NorR - Vibrionales

Regulon is present in 6 out of 10 genomes
; 6 NorR2 - Vibrionales

Regulon is present in 6 out of 10 genomes
13 NorR - Shewanellaceae

Regulon is present in 13 out of 16 genomes
4 NorR - Alteromonadales

Regulon is present in 4 out of 9 genomes
3 NorR - Psychromonadaceae/Aeromonadales

Regulon is present in 3 out of 6 genomes
4 NorR - Oceanospirillales/Alteromonadales

Regulon is present in 4 out of 12 genomes
6 NorR - Pseudomonadaceae

Regulon is present in 6 out of 8 genomes
NrdR 15 NrdR - Rhizobiales

Regulon is present in 15 out of 15 genomes
15 NrdR - Rhodobacterales

Regulon is present in 15 out of 15 genomes
9 NrdR - Rhodospirillales

Regulon is present in 9 out of 9 genomes
7 NrdR - Sphingomonadales

Regulon is present in 7 out of 7 genomes
4 NrdR - Caulobacterales

Regulon is present in 4 out of 4 genomes
6 NrdR - Ralstonia

Regulon is present in 6 out of 6 genomes
8 NrdR - Burkholderia

Regulon is present in 8 out of 8 genomes
11 NrdR - Comamonadaceae

Regulon is present in 11 out of 11 genomes
12 NrdR - Various betaproteobacteria

Regulon is present in 12 out of 12 genomes
12 NrdR - Enterobacteriales

Regulon is present in 12 out of 12 genomes
10 NrdR - Vibrionales

Regulon is present in 10 out of 10 genomes
9 NrdR - Pasteurellales

Regulon is present in 9 out of 9 genomes
16 NrdR - Shewanellaceae

Regulon is present in 16 out of 16 genomes
9 NrdR - Alteromonadales

Regulon is present in 9 out of 9 genomes
6 NrdR - Psychromonadaceae/Aeromonadales

Regulon is present in 6 out of 6 genomes
12 NrdR - Oceanospirillales/Alteromonadales

Regulon is present in 12 out of 12 genomes
8 NrdR - Pseudomonadaceae

Regulon is present in 8 out of 8 genomes
4 NrdR - Moraxellaceae

Regulon is present in 4 out of 4 genomes
4 NrdR - Xanthomonadales

Regulon is present in 4 out of 4 genomes
9 NrdR - Desulfuromonadales

Regulon is present in 9 out of 9 genomes
NrtR 2 NrtR - Rhizobiales

Regulon is present in 2 out of 15 genomes
1 NrtR - Rhodobacterales

Regulon is present in 1 out of 15 genomes
4 NrtR - Comamonadaceae

Regulon is present in 4 out of 11 genomes
2 NrtR - Various betaproteobacteria

Regulon is present in 2 out of 12 genomes
1 NrtR - Enterobacteriales

Regulon is present in 1 out of 12 genomes
4 NrtR - Vibrionales

Regulon is present in 4 out of 10 genomes
3 NrtR - Shewanellaceae

Regulon is present in 3 out of 16 genomes
3 NrtR - Psychromonadaceae/Aeromonadales

Regulon is present in 3 out of 6 genomes
2 NrtR - Oceanospirillales/Alteromonadales

Regulon is present in 2 out of 12 genomes
4 NrtR - Pseudomonadaceae

Regulon is present in 4 out of 8 genomes
2 NrtR - Moraxellaceae

Regulon is present in 2 out of 4 genomes
NsrR 1 NsrR - Rhizobiales

Regulon is present in 1 out of 15 genomes
5 NsrR - Rhodobacterales

Regulon is present in 5 out of 15 genomes
5 NsrR - Rhodospirillales

Regulon is present in 5 out of 9 genomes
2 NsrR - Sphingomonadales

Regulon is present in 2 out of 7 genomes
2 NsrR - Caulobacterales

Regulon is present in 2 out of 4 genomes
6 NsrR - Ralstonia

Regulon is present in 6 out of 6 genomes
8 NsrR - Burkholderia

Regulon is present in 8 out of 8 genomes
5 NsrR - Comamonadaceae

Regulon is present in 5 out of 11 genomes
6 NsrR2 - Various betaproteobacteria

Regulon is present in 6 out of 12 genomes
11 NsrR - Enterobacteriales

Regulon is present in 11 out of 12 genomes
8 NsrR - Vibrionales

Regulon is present in 8 out of 10 genomes
16 NsrR - Shewanellaceae

Regulon is present in 16 out of 16 genomes
1 NsrR - Alteromonadales

Regulon is present in 1 out of 9 genomes
2 NsrR - Psychromonadaceae/Aeromonadales

Regulon is present in 2 out of 6 genomes
4 NsrR - Oceanospirillales/Alteromonadales

Regulon is present in 4 out of 12 genomes
3 NsrR - Moraxellaceae

Regulon is present in 3 out of 4 genomes
NtrC 14 NtrC - Rhizobiales

Regulon is present in 14 out of 15 genomes
14 NtrC - Rhodobacterales

Regulon is present in 14 out of 15 genomes
8 NtrC - Rhodospirillales

Regulon is present in 8 out of 9 genomes
6 NtrC - Sphingomonadales

Regulon is present in 6 out of 7 genomes
4 NtrC - Caulobacterales

Regulon is present in 4 out of 4 genomes
6 NtrC - Ralstonia

Regulon is present in 6 out of 6 genomes
8 NtrC - Burkholderia

Regulon is present in 8 out of 8 genomes
11 NtrC - Comamonadaceae

Regulon is present in 11 out of 11 genomes
9 NtrC - Various betaproteobacteria

Regulon is present in 9 out of 12 genomes
12 NtrC - Enterobacteriales

Regulon is present in 12 out of 12 genomes
9 NtrC - Vibrionales

Regulon is present in 9 out of 10 genomes
16 NtrC - Shewanellaceae

Regulon is present in 16 out of 16 genomes
9 NtrC - Alteromonadales

Regulon is present in 9 out of 9 genomes
6 NtrC - Psychromonadaceae/Aeromonadales

Regulon is present in 6 out of 6 genomes
12 NtrC - Oceanospirillales/Alteromonadales

Regulon is present in 12 out of 12 genomes
8 NtrC - Pseudomonadaceae

Regulon is present in 8 out of 8 genomes
4 NtrC - Moraxellaceae

Regulon is present in 4 out of 4 genomes
4 NtrC - Xanthomonadales

Regulon is present in 4 out of 4 genomes
9 NtrC - Desulfuromonadales

Regulon is present in 9 out of 9 genomes
PdhR 12 PdhR - Enterobacteriales

Regulon is present in 12 out of 12 genomes
10 PdhR - Vibrionales

Regulon is present in 10 out of 10 genomes
16 PdhR - Shewanellaceae

Regulon is present in 16 out of 16 genomes
9 PdhR - Alteromonadales

Regulon is present in 9 out of 9 genomes
6 PdhR - Psychromonadaceae/Aeromonadales

Regulon is present in 6 out of 6 genomes
2 PdhR - Oceanospirillales/Alteromonadales

Regulon is present in 2 out of 12 genomes
PhnF 12 PhnF - Rhizobiales

Regulon is present in 12 out of 15 genomes
11 PhnF - Rhodobacterales

Regulon is present in 11 out of 15 genomes
4 PhnF - Ralstonia

Regulon is present in 4 out of 6 genomes
4 PhnF - Burkholderia

Regulon is present in 4 out of 8 genomes
1 PhnF - Comamonadaceae

Regulon is present in 1 out of 11 genomes
2 PhnF - Various betaproteobacteria

Regulon is present in 2 out of 12 genomes
6 PhnF - Enterobacteriales

Regulon is present in 6 out of 12 genomes
1 PhnF - Psychromonadaceae/Aeromonadales

Regulon is present in 1 out of 6 genomes
1 PhnF - Oceanospirillales/Alteromonadales

Regulon is present in 1 out of 12 genomes
3 PhnF - Pseudomonadaceae

Regulon is present in 3 out of 8 genomes
2 PhnF - Desulfovibrionales

Regulon is present in 2 out of 10 genomes
PhnR 2 PhnR - Caulobacterales

Regulon is present in 2 out of 4 genomes
3 PhnR2 - Ralstonia

Regulon is present in 3 out of 6 genomes
4 PhnR2 - Burkholderia

Regulon is present in 4 out of 8 genomes
2 PhnR2 - Comamonadaceae

Regulon is present in 2 out of 11 genomes
2 PhnR - Enterobacteriales

Regulon is present in 2 out of 12 genomes
; 1 PhnR1 - Enterobacteriales

Regulon is present in 1 out of 12 genomes
9 PhnR - Vibrionales

Regulon is present in 9 out of 10 genomes
4 PhnR - Psychromonadaceae/Aeromonadales

Regulon is present in 4 out of 6 genomes
; 2 PhnR1 - Psychromonadaceae/Aeromonadales

Regulon is present in 2 out of 6 genomes
1 PhnR - Oceanospirillales/Alteromonadales

Regulon is present in 1 out of 12 genomes
6 PhnR - Pseudomonadaceae

Regulon is present in 6 out of 8 genomes
1 PhnR - Moraxellaceae

Regulon is present in 1 out of 4 genomes
PrpR 1 PrpR - Comamonadaceae

Regulon is present in 1 out of 11 genomes
7 PrpR - Vibrionales

Regulon is present in 7 out of 10 genomes
16 PrpR - Shewanellaceae

Regulon is present in 16 out of 16 genomes
9 PrpR - Alteromonadales

Regulon is present in 9 out of 9 genomes
2 PrpR - Psychromonadaceae/Aeromonadales

Regulon is present in 2 out of 6 genomes
9 PrpR - Oceanospirillales/Alteromonadales

Regulon is present in 9 out of 12 genomes
8 PrpR - Pseudomonadaceae

Regulon is present in 8 out of 8 genomes
2 PrpR - Moraxellaceae

Regulon is present in 2 out of 4 genomes
3 PrpR - Desulfuromonadales

Regulon is present in 3 out of 9 genomes
PsrA 3 PsrA - Rhizobiales

Regulon is present in 3 out of 15 genomes
4 PsrA - Caulobacterales

Regulon is present in 4 out of 4 genomes
6 PsrA - Ralstonia

Regulon is present in 6 out of 6 genomes
8 PsrA - Burkholderia

Regulon is present in 8 out of 8 genomes
5 PsrA - Various betaproteobacteria

Regulon is present in 5 out of 12 genomes
8 PsrA - Vibrionales

Regulon is present in 8 out of 10 genomes
16 PsrA - Shewanellaceae

Regulon is present in 16 out of 16 genomes
4 PsrA - Alteromonadales

Regulon is present in 4 out of 9 genomes
3 PsrA - Psychromonadaceae/Aeromonadales

Regulon is present in 3 out of 6 genomes
8 PsrA - Oceanospirillales/Alteromonadales

Regulon is present in 8 out of 12 genomes
8 PsrA - Pseudomonadaceae

Regulon is present in 8 out of 8 genomes
3 PsrA - Xanthomonadales

Regulon is present in 3 out of 4 genomes
PurR 12 PurR - Enterobacteriales

Regulon is present in 12 out of 12 genomes
10 PurR - Vibrionales

Regulon is present in 10 out of 10 genomes
9 PurR - Pasteurellales

Regulon is present in 9 out of 9 genomes
RbsR 2 RbsR - Ralstonia

Regulon is present in 2 out of 6 genomes
7 RbsR - Burkholderia

Regulon is present in 7 out of 8 genomes
2 RbsR - Comamonadaceae

Regulon is present in 2 out of 11 genomes
11 RbsR - Enterobacteriales

Regulon is present in 11 out of 12 genomes
10 RbsR - Vibrionales

Regulon is present in 10 out of 10 genomes
6 RbsR - Pasteurellales

Regulon is present in 6 out of 9 genomes
2 RbsR - Shewanellaceae

Regulon is present in 2 out of 16 genomes
6 RbsR - Psychromonadaceae/Aeromonadales

Regulon is present in 6 out of 6 genomes
5 RbsR - Pseudomonadaceae

Regulon is present in 5 out of 8 genomes
1 RbsR - Desulfovibrionales

Regulon is present in 1 out of 10 genomes
RutR 9 RutR - Rhizobiales

Regulon is present in 9 out of 15 genomes
13 RutR - Rhodobacterales

Regulon is present in 13 out of 15 genomes
1 RutR - Rhodospirillales

Regulon is present in 1 out of 9 genomes
2 RutR - Caulobacterales

Regulon is present in 2 out of 4 genomes
4 RutR - Ralstonia

Regulon is present in 4 out of 6 genomes
7 RutR - Burkholderia

Regulon is present in 7 out of 8 genomes
7 RutR - Enterobacteriales

Regulon is present in 7 out of 12 genomes
2 RutR - Vibrionales

Regulon is present in 2 out of 10 genomes
4 RutR - Alteromonadales

Regulon is present in 4 out of 9 genomes
; 1 RutR2 - Alteromonadales

Regulon is present in 1 out of 9 genomes
1 RutR - Psychromonadaceae/Aeromonadales

Regulon is present in 1 out of 6 genomes
8 RutR - Oceanospirillales/Alteromonadales

Regulon is present in 8 out of 12 genomes
7 RutR - Pseudomonadaceae

Regulon is present in 7 out of 8 genomes
; 4 RutR2 - Pseudomonadaceae

Regulon is present in 4 out of 8 genomes
; 7 RutR3 - Pseudomonadaceae

Regulon is present in 7 out of 8 genomes
; 2 RutR4 - Pseudomonadaceae

Regulon is present in 2 out of 8 genomes
2 RutR - Moraxellaceae

Regulon is present in 2 out of 4 genomes
SahR/SamR 10 SahR - Rhizobiales

Regulon is present in 10 out of 15 genomes
2 SahR - Rhodobacterales

Regulon is present in 2 out of 15 genomes
7 SahR - Rhodospirillales

Regulon is present in 7 out of 9 genomes
7 SahR - Sphingomonadales

Regulon is present in 7 out of 7 genomes
4 SahR - Caulobacterales

Regulon is present in 4 out of 4 genomes
9 SahR - Oceanospirillales/Alteromonadales

Regulon is present in 9 out of 12 genomes
8 SahR - Pseudomonadaceae

Regulon is present in 8 out of 8 genomes
4 SamR - Xanthomonadales

Regulon is present in 4 out of 4 genomes
9 SahR - Desulfovibrionales

Regulon is present in 9 out of 10 genomes
6 SahR - Desulfuromonadales

Regulon is present in 6 out of 9 genomes
SiaR 4 SiaR - Enterobacteriales

Regulon is present in 4 out of 12 genomes
3 SiaR - Vibrionales

Regulon is present in 3 out of 10 genomes
7 SiaR - Pasteurellales

Regulon is present in 7 out of 9 genomes
1 SiaR - Psychromonadaceae/Aeromonadales

Regulon is present in 1 out of 6 genomes
SoxR 7 SoxR - Rhizobiales

Regulon is present in 7 out of 15 genomes
8 SoxR - Rhodobacterales

Regulon is present in 8 out of 15 genomes
1 SoxR - Rhodospirillales

Regulon is present in 1 out of 9 genomes
4 SoxR - Sphingomonadales

Regulon is present in 4 out of 7 genomes
3 SoxR - Ralstonia

Regulon is present in 3 out of 6 genomes
3 SoxR - Burkholderia

Regulon is present in 3 out of 8 genomes
5 SoxR - Comamonadaceae

Regulon is present in 5 out of 11 genomes
1 SoxR - Various betaproteobacteria

Regulon is present in 1 out of 12 genomes
6 SoxR - Enterobacteriales

Regulon is present in 6 out of 12 genomes
8 SoxR - Vibrionales

Regulon is present in 8 out of 10 genomes
6 SoxR - Shewanellaceae

Regulon is present in 6 out of 16 genomes
3 SoxR - Alteromonadales

Regulon is present in 3 out of 9 genomes
3 SoxR - Psychromonadaceae/Aeromonadales

Regulon is present in 3 out of 6 genomes
3 SoxR - Oceanospirillales/Alteromonadales

Regulon is present in 3 out of 12 genomes
5 SoxR - Pseudomonadaceae

Regulon is present in 5 out of 8 genomes
2 SoxR - Moraxellaceae

Regulon is present in 2 out of 4 genomes
3 SoxR - Xanthomonadales

Regulon is present in 3 out of 4 genomes
TrpR 12 TrpR - Enterobacteriales

Regulon is present in 12 out of 12 genomes
10 TrpR - Vibrionales

Regulon is present in 10 out of 10 genomes
8 TrpR - Pasteurellales

Regulon is present in 8 out of 9 genomes
16 TrpR - Shewanellaceae

Regulon is present in 16 out of 16 genomes
2 TrpR - Psychromonadaceae/Aeromonadales

Regulon is present in 2 out of 6 genomes
2 TrpR - Oceanospirillales/Alteromonadales

Regulon is present in 2 out of 12 genomes
2 TrpR - Moraxellaceae

Regulon is present in 2 out of 4 genomes
1 TrpR - Xanthomonadales

Regulon is present in 1 out of 4 genomes
TyrR 12 TyrR - Enterobacteriales

Regulon is present in 12 out of 12 genomes
10 TyrR - Vibrionales

Regulon is present in 10 out of 10 genomes
9 TyrR - Pasteurellales

Regulon is present in 9 out of 9 genomes
16 TyrR - Shewanellaceae

Regulon is present in 16 out of 16 genomes
7 TyrR1 - Alteromonadales

Regulon is present in 7 out of 9 genomes
; 2 TyrR2 - Alteromonadales

Regulon is present in 2 out of 9 genomes
4 TyrR - Psychromonadaceae/Aeromonadales

Regulon is present in 4 out of 6 genomes
7 PhhR - Pseudomonadaceae

Regulon is present in 7 out of 8 genomes
VanR 5 VanR - Rhizobiales

Regulon is present in 5 out of 15 genomes
3 VanR - Caulobacterales

Regulon is present in 3 out of 4 genomes
1 VanR - Burkholderia

Regulon is present in 1 out of 8 genomes
6 VanR - Comamonadaceae

Regulon is present in 6 out of 11 genomes
1 VanR - Alteromonadales

Regulon is present in 1 out of 9 genomes
2 VanR - Oceanospirillales/Alteromonadales

Regulon is present in 2 out of 12 genomes
4 VanR - Pseudomonadaceae

Regulon is present in 4 out of 8 genomes
2 VanR - Moraxellaceae

Regulon is present in 2 out of 4 genomes
2 VanR - Xanthomonadales

Regulon is present in 2 out of 4 genomes
ZntR 2 ZntR - Sphingomonadales

Regulon is present in 2 out of 7 genomes
1 ZntR - Caulobacterales

Regulon is present in 1 out of 4 genomes
11 ZntR - Enterobacteriales

Regulon is present in 11 out of 12 genomes
10 ZntR - Vibrionales

Regulon is present in 10 out of 10 genomes
16 ZntR - Shewanellaceae

Regulon is present in 16 out of 16 genomes
3 ZntR - Psychromonadaceae/Aeromonadales

Regulon is present in 3 out of 6 genomes
4 ZntR - Oceanospirillales/Alteromonadales

Regulon is present in 4 out of 12 genomes
1 ZntR - Xanthomonadales

Regulon is present in 1 out of 4 genomes
Zur 13 Zur - Rhizobiales

Regulon is present in 13 out of 15 genomes
15 Zur - Rhodobacterales

Regulon is present in 15 out of 15 genomes
9 Zur - Rhodospirillales

Regulon is present in 9 out of 9 genomes
7 Zur - Sphingomonadales

Regulon is present in 7 out of 7 genomes
4 Zur - Caulobacterales

Regulon is present in 4 out of 4 genomes
6 Zur - Ralstonia

Regulon is present in 6 out of 6 genomes
8 Zur - Burkholderia

Regulon is present in 8 out of 8 genomes
5 Zur - Comamonadaceae

Regulon is present in 5 out of 11 genomes
; 2 Zur2 - Comamonadaceae

Regulon is present in 2 out of 11 genomes
5 Zur - Various betaproteobacteria

Regulon is present in 5 out of 12 genomes
; 3 Zur2 - Various betaproteobacteria

Regulon is present in 3 out of 12 genomes
12 Zur - Enterobacteriales

Regulon is present in 12 out of 12 genomes
10 Zur - Vibrionales

Regulon is present in 10 out of 10 genomes
9 Zur - Alteromonadales

Regulon is present in 9 out of 9 genomes
6 Zur - Psychromonadaceae/Aeromonadales

Regulon is present in 6 out of 6 genomes
12 Zur - Oceanospirillales/Alteromonadales

Regulon is present in 12 out of 12 genomes
8 Zur - Pseudomonadaceae

Regulon is present in 8 out of 8 genomes
4 Zur - Moraxellaceae

Regulon is present in 4 out of 4 genomes
4 Zur - Xanthomonadales

Regulon is present in 4 out of 4 genomes
6 Zur - Desulfovibrionales

Regulon is present in 6 out of 10 genomes
4 Zur - Desulfuromonadales

Regulon is present in 4 out of 9 genomes
Green color - regulons are present
Light gray color - regulons are absent
Dark gray color - regulons are not studied