Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Orthologous regulated operons containing araN-II gene

Properties
Regulog: AraR - Thermotogales
Regulator type: Transcription factor
Regulator family: GntR/Others
Regulation mode: repressor
Biological process: Arabinose utilization
Effector: Arabinose
Phylum: Thermotogae
Built upon 35 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Thermotoga lettingae TMO
Position: -169
Score: 4.99913
Sequence: TAATTTGTATGTACATATAT
Locus tag: Tlet_1143
Name: araN-II
Funciton: Predicted arabinose ABC transporter, substrate binding protein
Locus tag: Tlet_1144
Name: araP-II
Funciton: Alpha-arabinosides ABC transport system, permease protein 1
Locus tag: Tlet_1145
Name: araQ-II
Funciton: Alpha-arabinosides ABC transport system, permease protein 2
Locus tag: Tlet_1146
Name: xynB
Funciton: Endo-1,4-beta-xylanase
Locus tag: Tlet_1147
Name: abf3
Funciton: Alpha-N-arabinofuranosidase II (EC 3.2.1.55)
Locus tag: Tlet_1148
Name: abfA
Funciton: Alpha-N-arabinofuranosidase (EC 3.2.1.55)
Locus tag: Tlet_1149
Name: araA-II
Funciton: Predicted L-arabinose isomerase (EC 5.3.1.4)
Locus tag: Tlet_1150
Name: araB
Funciton: Ribulokinase (EC 2.7.1.16)
araN-II-araP-II-araQ-II-xynB-abf3-abfA-araA-II-araB -169 5 TAATTTGTATGTACATATAT Tlet_1143
Thermotoga petrophila RKU-1
Position: -233
Score: 5.35162
Sequence: CATTTTGTACGTACATATAT
Position: -50
Score: 5.74643
Sequence: AAATTGGTACGTACCTATCT
Locus tag: Tpet_0636
Name: araN-II
Funciton: Predicted arabinose ABC transporter, substrate binding protein
Locus tag: Tpet_0635
Name: araP-II
Funciton: Alpha-arabinosides ABC transport system, permease protein 1
Locus tag: Tpet_0634
Name: araQ-II
Funciton: Alpha-arabinosides ABC transport system, permease protein 2
Locus tag: Tpet_0633
Name: abf3
Funciton: Alpha-N-arabinofuranosidase II (EC 3.2.1.55)
Locus tag: Tpet_0632
Name: xylX
Funciton: Secreted glycosyl hydrolase, similar to xylosidase
Locus tag: Tpet_0631
Name: abfA
Funciton: Alpha-N-arabinofuranosidase (EC 3.2.1.55)
Locus tag: Tpet_0630
Name: araM
Funciton: L-arabinose-specific 1-epimerase (mutarotase)
Locus tag: Tpet_0629
Name: araD
Funciton: L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4)
Locus tag: Tpet_0628
Name: araB
Funciton: Ribulokinase (EC 2.7.1.16)
Locus tag: Tpet_0627
Name: araW
Funciton: Predicted glycerol-1-phosphate dehydrogenase, arabinose operon
araN-II-araP-II-araQ-II-abf3-xylX-abfA-araM-araD-araB-araW -233 5.4 CATTTTGTACGTACATATAT Tpet_0636
-50 5.7 AAATTGGTACGTACCTATCT
Thermotoga sp. RQ2
Position: -233
Score: 5.35162
Sequence: CATTTTGTACGTACATATAT
Position: -50
Score: 5.74643
Sequence: AAATTGGTACGTACCTATCT
Locus tag: TRQ2_0661
Name: araN-II
Funciton: Predicted arabinose ABC transporter, substrate binding protein
Locus tag: TRQ2_0660
Name: araP-II
Funciton: Alpha-arabinosides ABC transport system, permease protein 1
Locus tag: TRQ2_0659
Name: araQ-II
Funciton: Alpha-arabinosides ABC transport system, permease protein 2
Locus tag: TRQ2_0658
Name: abf3
Funciton: Alpha-N-arabinofuranosidase II (EC 3.2.1.55)
Locus tag: TRQ2_0657
Name: xylX
Funciton: Secreted glycosyl hydrolase, similar to xylosidase
Locus tag: TRQ2_0656
Name: abfA
Funciton: Alpha-N-arabinofuranosidase (EC 3.2.1.55)
Locus tag: TRQ2_0655
Name: araM
Funciton: L-arabinose-specific 1-epimerase (mutarotase)
Locus tag: TRQ2_0654
Name: araD
Funciton: L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4)
Locus tag: TRQ2_0653
Name: araB
Funciton: Ribulokinase (EC 2.7.1.16)
Locus tag: TRQ2_0652
Name: araW
Funciton: Predicted glycerol-1-phosphate dehydrogenase, arabinose operon
araN-II-araP-II-araQ-II-abf3-xylX-abfA-araM-araD-araB-araW -233 5.4 CATTTTGTACGTACATATAT TRQ2_0661
-50 5.7 AAATTGGTACGTACCTATCT