Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Orthologous regulated operons containing araD gene

Properties
Regulog: AraR - Thermotogales
Regulator type: Transcription factor
Regulator family: GntR/Others
Regulation mode: repressor
Biological process: Arabinose utilization
Effector: Arabinose
Phylum: Thermotogae
Built upon 35 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Thermotoga lettingae TMO
Position: 27
Score: 5.34936
Sequence: ATTTATGTACGTACGTTTAC
Locus tag: Tlet_1138
Name: araR
Funciton: Transcriptional repressor of arabinoside utilization operon, GntR family
Locus tag: Tlet_1139
Name: araD
Funciton: L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4)
araR-araD 27 5.3 ATTTATGTACGTACGTTTAC Tlet_1138
Thermotoga maritima MSB8
Position: -44
Score: 5.93951
Sequence: AATAATGTACGTACCTAAAT
Locus tag: TM0280
Name: glsA
Funciton: Putative glycosyl hydrolase of unknown function (DUF1680)
Locus tag: TM0281
Name: abfA
Funciton: Alpha-N-arabinofuranosidase (EC 3.2.1.55)
Locus tag: TM0282
Name: araM
Funciton: L-arabinose-specific 1-epimerase (mutarotase)
Locus tag: TM0283
Name: araD
Funciton: L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4)
Locus tag: TM0284
Name: araB
Funciton: Ribulokinase (EC 2.7.1.16)
Locus tag: TM0285
Name: araW
Funciton: Predicted glycerol-1-phosphate dehydrogenase, arabinose operon
glsA-abfA-araM-araD-araB-araW -44 5.9 AATAATGTACGTACCTAAAT TM0280
Thermotoga naphthophila RKU-10
Position: -56
Score: 4.89355
Sequence: TATAATGTACGTACCTATCA
Position: -55
Score: 5.03261
Sequence: GATAATATACGTACCTAAAT
Locus tag: Tnap_0910
Name: glsA
Funciton: Putative glycosyl hydrolase of unknown function (DUF1680)
Locus tag: Tnap_0911
Name: abfA
Funciton: Alpha-N-arabinofuranosidase (EC 3.2.1.55)
Locus tag: Tnap_0912
Name: araM
Funciton: L-arabinose-specific 1-epimerase (mutarotase)
Locus tag: Tnap_0913
Name: Tnap_0913
Funciton: predicted arabinose ABC transporter, sugar-binding protein
Locus tag: Tnap_0914
Name: Tnap_0914
Funciton: predicted arabinose ABC transporter, permease component
Locus tag: Tnap_0915
Name: araD
Funciton: L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4)
Locus tag: Tnap_0916
Name: araB
Funciton: Ribulokinase (EC 2.7.1.16)
Locus tag: Tnap_0917
Name: araW
Funciton: Predicted glycerol-1-phosphate dehydrogenase, arabinose operon
glsA-abfA-araM-Tnap_0913-Tnap_0914-araD-araB-araW -56 4.9 TATAATGTACGTACCTATCA Tnap_0910
-55 5 GATAATATACGTACCTAAAT
Thermotoga petrophila RKU-1
Position: -233
Score: 5.35162
Sequence: CATTTTGTACGTACATATAT
Position: -50
Score: 5.74643
Sequence: AAATTGGTACGTACCTATCT
Locus tag: Tpet_0636
Name: araN-II
Funciton: Predicted arabinose ABC transporter, substrate binding protein
Locus tag: Tpet_0635
Name: araP-II
Funciton: Alpha-arabinosides ABC transport system, permease protein 1
Locus tag: Tpet_0634
Name: araQ-II
Funciton: Alpha-arabinosides ABC transport system, permease protein 2
Locus tag: Tpet_0633
Name: abf3
Funciton: Alpha-N-arabinofuranosidase II (EC 3.2.1.55)
Locus tag: Tpet_0632
Name: xylX
Funciton: Secreted glycosyl hydrolase, similar to xylosidase
Locus tag: Tpet_0631
Name: abfA
Funciton: Alpha-N-arabinofuranosidase (EC 3.2.1.55)
Locus tag: Tpet_0630
Name: araM
Funciton: L-arabinose-specific 1-epimerase (mutarotase)
Locus tag: Tpet_0629
Name: araD
Funciton: L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4)
Locus tag: Tpet_0628
Name: araB
Funciton: Ribulokinase (EC 2.7.1.16)
Locus tag: Tpet_0627
Name: araW
Funciton: Predicted glycerol-1-phosphate dehydrogenase, arabinose operon
araN-II-araP-II-araQ-II-abf3-xylX-abfA-araM-araD-araB-araW -233 5.4 CATTTTGTACGTACATATAT Tpet_0636
-50 5.7 AAATTGGTACGTACCTATCT
Thermotoga sp. RQ2
Position: -233
Score: 5.35162
Sequence: CATTTTGTACGTACATATAT
Position: -50
Score: 5.74643
Sequence: AAATTGGTACGTACCTATCT
Locus tag: TRQ2_0661
Name: araN-II
Funciton: Predicted arabinose ABC transporter, substrate binding protein
Locus tag: TRQ2_0660
Name: araP-II
Funciton: Alpha-arabinosides ABC transport system, permease protein 1
Locus tag: TRQ2_0659
Name: araQ-II
Funciton: Alpha-arabinosides ABC transport system, permease protein 2
Locus tag: TRQ2_0658
Name: abf3
Funciton: Alpha-N-arabinofuranosidase II (EC 3.2.1.55)
Locus tag: TRQ2_0657
Name: xylX
Funciton: Secreted glycosyl hydrolase, similar to xylosidase
Locus tag: TRQ2_0656
Name: abfA
Funciton: Alpha-N-arabinofuranosidase (EC 3.2.1.55)
Locus tag: TRQ2_0655
Name: araM
Funciton: L-arabinose-specific 1-epimerase (mutarotase)
Locus tag: TRQ2_0654
Name: araD
Funciton: L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4)
Locus tag: TRQ2_0653
Name: araB
Funciton: Ribulokinase (EC 2.7.1.16)
Locus tag: TRQ2_0652
Name: araW
Funciton: Predicted glycerol-1-phosphate dehydrogenase, arabinose operon
araN-II-araP-II-araQ-II-abf3-xylX-abfA-araM-araD-araB-araW -233 5.4 CATTTTGTACGTACATATAT TRQ2_0661
-50 5.7 AAATTGGTACGTACCTATCT