Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Orthologous regulated operons containing Vapar_2881 gene

Properties
Regulog: UxuR2 - Comamonadaceae
Regulator type: Transcription factor
Regulator family: GntR/Others
Regulation mode:
Biological process: Glucuronate utilization; Galacturonate utilization
Effector:
Phylum: Proteobacteria/Beta
Built upon 24 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Variovorax paradoxus S110
Position: -27
Score: 5.15066
Sequence: AATGTGGTCTAACCAATTT
Locus tag: Vapar_2876
Name: uxuR3
Funciton: Predicted transcriptional regulator for glucuronate utilization, GntR family
Locus tag: Vapar_2877
Name: Aave_2470
Funciton: Cyclohexadienyl dehydratase (EC 4.2.1.51)(EC 4.2.1.91) # Periplasmic precursor
Locus tag: Vapar_2878
Name: Vapar_2878
Funciton: Amino acid ABC transporter, periplasmic amino acid-binding protein
Locus tag: Vapar_2879
Name: idnD/tdh
Funciton: L-idonate 5-dehydrogenase (EC 1.1.1.264)
Locus tag: Vapar_2880
Name: Vapar_2880
Funciton: Amino acid ABC transporter, inner membrane subunit
Locus tag: Vapar_2881
Name: Vapar_2881
Funciton: Amino acid ABC transporter, inner membrane subunit
Locus tag: Vapar_2882
Name: Vapar_2882
Funciton: Amino acid transport ATP-binding protein GlnQ (TC 3.A.1.3.2)
Locus tag: Vapar_2883
Name: Bpro_3978
Funciton: Mandelate racemase/muconate lactonizing enzyme, C-terminal domain protein
Locus tag: Vapar_2884
Name: mtlD
Funciton: D-mannonate oxidoreductase (EC 1.1.1.57)
uxuR3-Aave_2470-Vapar_2878-idnD/tdh-Vapar_2880-Vapar_2881-Vapar_2882-Bpro_3978-mtlD -27 5.2 AATGTGGTCTAACCAATTT Vapar_2876
Verminephrobacter eiseniae EF01-2
Position: -25
Score: 5.3235
Sequence: TAATTGGTCTATCCAATTT
Locus tag: Veis_3567
Name: uxuR3
Funciton: Predicted transcriptional regulator for glucuronate utilization, GntR family
Locus tag: Veis_3566
Name: Vapar_2878
Funciton: Amino acid ABC transporter, periplasmic amino acid-binding protein
Locus tag: Veis_3565
Name: idnD/tdh
Funciton: L-idonate 5-dehydrogenase (EC 1.1.1.264)
Locus tag: Veis_3564
Name: Vapar_2880
Funciton: Amino acid ABC transporter, inner membrane subunit
Locus tag: Veis_3563
Name: Vapar_2881
Funciton: Amino acid ABC transporter, inner membrane subunit
Locus tag: Veis_3562
Name: Vapar_2882
Funciton: Amino acid transport ATP-binding protein GlnQ (TC 3.A.1.3.2)
Locus tag: Veis_3561
Name: Bpro_3978
Funciton: Mandelate racemase/muconate lactonizing enzyme, C-terminal domain protein
Locus tag: Veis_3560
Name: mtlD
Funciton: D-mannonate oxidoreductase (EC 1.1.1.57)
Locus tag: Veis_3559
Name: Pnap_1486
Funciton: 2-dehydro-3-deoxygluconate kinase (EC 2.7.1.45)
uxuR3-Vapar_2878-idnD/tdh-Vapar_2880-Vapar_2881-Vapar_2882-Bpro_3978-mtlD-Pnap_1486 -25 5.3 TAATTGGTCTATCCAATTT Veis_3567