Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Orthologous regulated operons containing Bpro_3960 gene

Properties
Regulog: UxuR2 - Comamonadaceae
Regulator type: Transcription factor
Regulator family: GntR/Others
Regulation mode:
Biological process: Glucuronate utilization; Galacturonate utilization
Effector:
Phylum: Proteobacteria/Beta
Built upon 24 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Polaromonas sp. JS666
Position: -131
Score: 5.47591
Sequence: CAAGTGGTAAGGCCAATTG
Locus tag: Bpro_3962
Name: COG4948
Funciton: Muconate cycloisomerase (EC 5.5.1.1)
Locus tag: Bpro_3961
Name: Bpro_3961
Funciton: 2-keto-3-deoxy-L-fuconate dehydrogenase
Locus tag: Bpro_3960
Name: Bpro_3960
Funciton: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
Locus tag: Bpro_3959
Name: mhpD
Funciton: 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase (EC 5.3.3.-) / 5-carboxymethyl-2-oxo-hex-3- ene-1,7-dioate decarboxylase (EC 4.1.1.68)
COG4948-Bpro_3961-Bpro_3960-mhpD -131 5.5 CAAGTGGTAAGGCCAATTG Bpro_3962
Variovorax paradoxus S110
Position: -104
Score: 5.04502
Sequence: CAAGTGGTAAGGCCAATTC
Locus tag: Vapar_0788
Name: Bpro_3961
Funciton: 2-keto-3-deoxy-L-fuconate dehydrogenase
Locus tag: Vapar_0789
Name: Bpro_3960
Funciton: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
Locus tag: Vapar_0790
Name: mhpD
Funciton: 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase (EC 5.3.3.-) / 5-carboxymethyl-2-oxo-hex-3- ene-1,7-dioate decarboxylase (EC 4.1.1.68)
Bpro_3961-Bpro_3960-mhpD -104 5 CAAGTGGTAAGGCCAATTC Vapar_0788