Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Orthologous regulated operons containing alkB gene

Properties
Regulog: LexA - Mycobacteriaceae
Regulator type: Transcription factor
Regulator family: LexA
Regulation mode: repressor
Biological process: SOS response
Effector: DNA damage
Phylum: Actinobacteria
Built upon 83 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Mycobacterium abscessus ATCC 19977
Position: -28
Score: 5.46039
Sequence: TCGAACGTATGTGCGA
Locus tag: MAB_1120c
Name: alkB
Funciton: DNA repair system specific for alkylated DNA
alkB -28 5.5 TCGAACGTATGTGCGA MAB_1120c
Mycobacterium avium 104
Position: -29
Score: 5.37733
Sequence: TCGAACGGATGTGCGA
Locus tag: MAV_1124
Name: alkB
Funciton: DNA repair system specific for alkylated DNA
alkB -29 5.4 TCGAACGGATGTGCGA MAV_1124
Mycobacterium flavescens PYR-GCK
Position: -29
Score: 5.33626
Sequence: TCGAACGCCTGTGCGA
Locus tag: Mflv_1921
Name: alkB
Funciton: DNA repair system specific for alkylated DNA
alkB -29 5.3 TCGAACGCCTGTGCGA Mflv_1921
Mycobacterium leprae TN
Position: -8
Score: 5.19659
Sequence: TCGAACTGATGTGCGA
Locus tag: ML0190
Name: alkB
Funciton: DNA repair system specific for alkylated DNA
alkB -8 5.2 TCGAACTGATGTGCGA ML0190
Mycobacterium marinum M
Position: -8
Score: 5.19659
Sequence: TCGAACTGATGTGCGA
Locus tag: MMAR_4493
Name: alkB
Funciton: DNA repair system specific for alkylated DNA
alkB -8 5.2 TCGAACTGATGTGCGA MMAR_4493
Mycobacterium smegmatis str. MC2 155
Position: -29
Score: 5.41932
Sequence: TCGAACGTGTGTGCGA
Locus tag: MSMEG_5451
Name: alkB
Funciton: DNA repair system specific for alkylated DNA
alkB -29 5.4 TCGAACGTGTGTGCGA MSMEG_5451
Mycobacterium sp. JLS
Position: -29
Score: 5.37826
Sequence: TCGAACGCGTGTGCGA
Locus tag: Mjls_4657
Name: alkB
Funciton: DNA repair system specific for alkylated DNA
alkB -29 5.4 TCGAACGCGTGTGCGA Mjls_4657
Mycobacterium tuberculosis H37Rv
Position: -8
Score: 5.33715
Sequence: TCGAACGAATGTGCGA
Locus tag: Rv1000c
Name: alkB
Funciton: DNA repair system specific for alkylated DNA
alkB -8 5.3 TCGAACGAATGTGCGA Rv1000c
Mycobacterium vanbaalenii PYR-1
Position: -29
Score: 5.33626
Sequence: TCGAACGCCTGTGCGA
Locus tag: Mvan_4812
Name: alkB
Funciton: DNA repair system specific for alkylated DNA
alkB -29 5.3 TCGAACGCCTGTGCGA Mvan_4812