Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Orthologous regulated operons containing ruvC gene

Properties
Regulog: LexA - Frankineae/Propionibacterineae/Pseudonocardiaceae
Regulator type: Transcription factor
Regulator family: LexA
Regulation mode: repressor
Biological process: SOS response
Effector: DNA damage
Phylum: Actinobacteria
Built upon 68 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Acidothermus cellulolyticus 11B
Position: 15
Score: 5.52401
Sequence: CCGAACATGCGTTCGA
Locus tag: Acel_1345
Name: ruvC
Funciton: Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4)
Locus tag: Acel_1344
Name: ruvA
Funciton: Holliday junction DNA helicase RuvA
Locus tag: Acel_1343
Name: ruvB
Funciton: Holliday junction DNA helicase RuvB
ruvC-ruvA-ruvB 15 5.5 CCGAACATGCGTTCGA Acel_1345
Actinosynnema mirum DSM 43827
Position: -58
Score: 5.00898
Sequence: TCGAACTGGTGTTCGC
Locus tag: Amir_1692
Name: ruvC
Funciton: Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4)
Locus tag: Amir_1691
Name: ruvA
Funciton: Holliday junction DNA helicase RuvA
Locus tag: Amir_1690
Name: ruvB
Funciton: Holliday junction DNA helicase RuvB
ruvC-ruvA-ruvB -58 5 TCGAACTGGTGTTCGC Amir_1692
Frankia sp. CcI3
Position: -40
Score: 4.52504
Sequence: TCGAACGAATGTTCTT
Locus tag: Francci3_1369
Name: ruvC
Funciton: Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4)
Locus tag: Francci3_1370
Name: ruvA
Funciton: Holliday junction DNA helicase RuvA
Locus tag: Francci3_1371
Name: ruvB
Funciton: Holliday junction DNA helicase RuvB
ruvC-ruvA-ruvB -40 4.5 TCGAACGAATGTTCTT Francci3_1369
Frankia sp. EAN1pec
Position: -37
Score: 5.3571
Sequence: TCGAACGGATGTTCGT
Locus tag: Franean1_5146
Name: ruvC
Funciton: Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4)
Locus tag: Franean1_5145
Name: ruvA
Funciton: Holliday junction DNA helicase RuvA
Locus tag: Franean1_5144
Name: ruvB
Funciton: Holliday junction DNA helicase RuvB
ruvC-ruvA-ruvB -37 5.4 TCGAACGGATGTTCGT Franean1_5146
Nakamurella multipartita DSM 44233
Position: -85
Score: 4.04182
Sequence: CTGGACAGGTGTTCGC
Locus tag: Namu_3396
Name: ruvC
Funciton: Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4)
Locus tag: Namu_3395
Name: ruvA
Funciton: Holliday junction DNA helicase RuvA
Locus tag: Namu_3394
Name: ruvB
Funciton: Holliday junction DNA helicase RuvB
ruvC-ruvA-ruvB -85 4 CTGGACAGGTGTTCGC Namu_3396
Nocardioides sp. JS614
Position: -31
Score: 5.42347
Sequence: CCGAACACCTGTTCGG
Locus tag: Noca_2385
Name: ruvC
Funciton: Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4)
Locus tag: Noca_2386
Name: ruvA
Funciton: Holliday junction DNA helicase RuvA
Locus tag: Noca_2387
Name: ruvB
Funciton: Holliday junction DNA helicase RuvB
ruvC-ruvA-ruvB -31 5.4 CCGAACACCTGTTCGG Noca_2385
Saccharomonospora viridis DSM 43017
Position: -33
Score: 5.00898
Sequence: TCGAACTGGTGTTCGC
Locus tag: Svir_15060
Name: ruvC
Funciton: Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4)
Locus tag: Svir_15070
Name: ruvA
Funciton: Holliday junction DNA helicase RuvA
Locus tag: Svir_15080
Name: ruvB
Funciton: Holliday junction DNA helicase RuvB
ruvC-ruvA-ruvB -33 5 TCGAACTGGTGTTCGC Svir_15060
Saccharopolyspora erythraea NRRL 2338
Position: -37
Score: 5.05181
Sequence: TCGAACGCGTGTTCAG
Locus tag: SACE_2021
Name: ruvC
Funciton: Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4)
Locus tag: SACE_2022
Name: ruvA
Funciton: Holliday junction DNA helicase RuvA
Locus tag: SACE_2023
Name: ruvB
Funciton: Holliday junction DNA helicase RuvB
ruvC-ruvA-ruvB -37 5.1 TCGAACGCGTGTTCAG SACE_2021