Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Orthologous regulated operons containing araA gene

Properties
Regulog: AraR - Shewanellaceae
Regulator type: Transcription factor
Regulator family: GntR/Others
Regulation mode: repressor
Biological process: Arabinose utilization
Effector: Arabinose
Phylum: Proteobacteria/gamma
Built upon 30 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Shewanella putrefaciens CN-32
Position: -107
Score: 5.29426
Sequence: AAATAATATTGTAATACCA
Position: -80
Score: 6.12001
Sequence: TAGTAGTATTGTAGTACTA
Locus tag: Sputcn32_2068
Name: araB
Funciton: Ribulokinase (EC 2.7.1.16)
Locus tag: Sputcn32_2067
Name: araD
Funciton: L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4)
Locus tag: Sputcn32_2066
Name: araA
Funciton: L-arabinose isomerase (EC 5.3.1.4)
Locus tag: Sputcn32_2065
Name: araX
Funciton: Hypothetical phosphoglucomutase family hydrolase in arabinose utilization cluster
araB-araD-araA-araX -107 5.3 AAATAATATTGTAATACCA Sputcn32_2068
-80 6.1 TAGTAGTATTGTAGTACTA
Shewanella sp ANA-3
Position: -108
Score: 4.80544
Sequence: AAATCATATTGTATTACTA
Position: -81
Score: 6.13981
Sequence: TAGTAATATTGTAGTACTA
Locus tag: Shewana3_2064
Name: araB
Funciton: Ribulokinase (EC 2.7.1.16)
Locus tag: Shewana3_2065
Name: araD
Funciton: L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4)
Locus tag: Shewana3_2066
Name: araA
Funciton: L-arabinose isomerase (EC 5.3.1.4)
Locus tag: Shewana3_2067
Name: araX
Funciton: Hypothetical phosphoglucomutase family hydrolase in arabinose utilization cluster
araB-araD-araA-araX -108 4.8 AAATCATATTGTATTACTA Shewana3_2064
-81 6.1 TAGTAATATTGTAGTACTA
Shewanella sp MR-4
Position: -108
Score: 4.80544
Sequence: AAATCATATTGTATTACTA
Position: -81
Score: 6.13981
Sequence: TAGTAATATTGTAGTACTA
Locus tag: Shewmr4_1977
Name: araB
Funciton: Ribulokinase (EC 2.7.1.16)
Locus tag: Shewmr4_1978
Name: araD
Funciton: L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4)
Locus tag: Shewmr4_1979
Name: araA
Funciton: L-arabinose isomerase (EC 5.3.1.4)
Locus tag: Shewmr4_1980
Name: araX
Funciton: Hypothetical phosphoglucomutase family hydrolase in arabinose utilization cluster
araB-araD-araA-araX -108 4.8 AAATCATATTGTATTACTA Shewmr4_1977
-81 6.1 TAGTAATATTGTAGTACTA
Shewanella sp MR-7
Position: -108
Score: 4.80544
Sequence: AAATCATATTGTATTACTA
Position: -81
Score: 6.13981
Sequence: TAGTAATATTGTAGTACTA
Locus tag: Shewmr7_1997
Name: araB
Funciton: Ribulokinase (EC 2.7.1.16)
Locus tag: Shewmr7_1996
Name: araD
Funciton: L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4)
Locus tag: Shewmr7_1995
Name: araA
Funciton: L-arabinose isomerase (EC 5.3.1.4)
Locus tag: Shewmr7_1994
Name: araX
Funciton: Hypothetical phosphoglucomutase family hydrolase in arabinose utilization cluster
araB-araD-araA-araX -108 4.8 AAATCATATTGTATTACTA Shewmr7_1997
-81 6.1 TAGTAATATTGTAGTACTA
Shewanella sp W3-18-1
Position: -107
Score: 5.29426
Sequence: AAATAATATTGTAATACCA
Position: -80
Score: 6.12001
Sequence: TAGTAGTATTGTAGTACTA
Locus tag: Sputw3181_1944
Name: araB
Funciton: Ribulokinase (EC 2.7.1.16)
Locus tag: Sputw3181_1945
Name: araD
Funciton: L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4)
Locus tag: Sputw3181_1946
Name: araA
Funciton: L-arabinose isomerase (EC 5.3.1.4)
Locus tag: Sputw3181_1947
Name: araX
Funciton: Hypothetical phosphoglucomutase family hydrolase in arabinose utilization cluster
araB-araD-araA-araX -107 5.3 AAATAATATTGTAATACCA Sputw3181_1944
-80 6.1 TAGTAGTATTGTAGTACTA